scaffold12206 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12206 |
1 |
90 |
- |
RS7234 |
Unspecified |
| scaffold12206 |
562 |
582 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
1110 |
1160 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold12206 |
2065 |
2089 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
3230 |
3247 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
3376 |
3404 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
4040 |
4085 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold12206 |
4097 |
4141 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold12206 |
4383 |
4442 |
- |
ATCopia24I |
LTR/Copia |
| scaffold12206 |
4397 |
4442 |
+ |
Gypsy-19_SB-I |
LTR/Gypsy |
| scaffold12206 |
4986 |
5054 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold12206 |
5158 |
5207 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12206 |
5476 |
5564 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
6068 |
6149 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold12206 |
6159 |
6928 |
- |
RS3095 |
Unspecified |
| scaffold12206 |
6309 |
6346 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
6484 |
6717 |
+ |
RS2504 |
Unspecified |
| scaffold12206 |
7603 |
7662 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
8059 |
8082 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
8289 |
8387 |
- |
RS1581 |
Unspecified |
| scaffold12206 |
8388 |
9399 |
+ |
RS288 |
Unspecified |
| scaffold12206 |
9551 |
9577 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
9953 |
10445 |
+ |
RS2850 |
Unspecified |
| scaffold12206 |
10494 |
10642 |
+ |
RS2850 |
Unspecified |
| scaffold12206 |
10696 |
10811 |
+ |
RS10591 |
Unspecified |
| scaffold12206 |
10780 |
11106 |
+ |
RS940 |
Unspecified |
| scaffold12206 |
11107 |
11364 |
+ |
RS2850 |
Unspecified |
| scaffold12206 |
11476 |
11602 |
+ |
RS5909 |
Unspecified |
| scaffold12206 |
11724 |
11780 |
+ |
RS10591 |
Unspecified |
| scaffold12206 |
11749 |
12604 |
+ |
RS940 |
Unspecified |
| scaffold12206 |
12608 |
12731 |
+ |
RS170 |
Unspecified |
| scaffold12206 |
12730 |
13023 |
+ |
RS940 |
Unspecified |
| scaffold12206 |
13042 |
13122 |
+ |
RS1975 |
Unspecified |
| scaffold12206 |
13424 |
13510 |
+ |
RS1975 |
Unspecified |
| scaffold12206 |
14326 |
14789 |
+ |
RS994 |
Unspecified |
| scaffold12206 |
14798 |
15299 |
+ |
RS994 |
Unspecified |
| scaffold12206 |
15520 |
15586 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
20812 |
20830 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
21279 |
21321 |
+ |
(CGATGA)n |
Simple_repeat |
| scaffold12206 |
21431 |
21496 |
+ |
(CGTTCA)n |
Simple_repeat |
| scaffold12206 |
21739 |
21860 |
+ |
RS11076 |
Unspecified |
| scaffold12206 |
22208 |
22236 |
+ |
(AATG)n |
Simple_repeat |
| scaffold12206 |
23779 |
23809 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
24488 |
24515 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold12206 |
24744 |
24922 |
- |
RS3533 |
Unspecified |
| scaffold12206 |
24926 |
24950 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12206 |
25639 |
25688 |
+ |
(TTTTAG)n |
Simple_repeat |
| scaffold12206 |
28305 |
28451 |
+ |
RS1543 |
Unspecified |
| scaffold12206 |
28753 |
29100 |
- |
RS3211 |
Unspecified |
| scaffold12206 |
29684 |
29761 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold12206 |
29684 |
30157 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold12206 |
29726 |
30157 |
+ |
RS155 |
Unspecified |
| scaffold12206 |
31204 |
31676 |
+ |
RS246 |
Unspecified |
| scaffold12206 |
31796 |
31854 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12206 |
31796 |
32290 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12206 |
31837 |
32290 |
- |
RS2020 |
Unspecified |
| scaffold12206 |
32437 |
32469 |
+ |
(CGGGT)n |
Simple_repeat |
| scaffold12206 |
32660 |
32840 |
+ |
RS2537 |
Unspecified |
| scaffold12206 |
33506 |
34010 |
- |
PL271 |
Unspecified |
| scaffold12206 |
34287 |
34314 |
+ |
(T)n |
Simple_repeat |
| scaffold12206 |
34331 |
34465 |
- |
RS14620 |
Unspecified |
| scaffold12206 |
34456 |
34598 |
+ |
RS2537 |
Unspecified |
| scaffold12206 |
37061 |
37199 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold12206 |
37353 |
37525 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold12206 |
37583 |
37841 |
- |
RS1 |
Unspecified |
| scaffold12206 |
41286 |
41478 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold12206 |
41479 |
41551 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold12206 |
45682 |
45761 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold12206 |
45969 |
45995 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
46347 |
46609 |
+ |
RS68 |
Unspecified |
| scaffold12206 |
46704 |
46884 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12206 |
46880 |
47072 |
- |
PL2 |
Unspecified |
| scaffold12206 |
47066 |
47224 |
- |
PL2 |
Unspecified |
| scaffold12206 |
47223 |
47291 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12206 |
47351 |
47380 |
+ |
(TAT)n |
Simple_repeat |
| scaffold12206 |
47445 |
47633 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12206 |
47655 |
47765 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold12206 |
47766 |
47784 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold12206 |
48116 |
48511 |
- |
RS10449 |
Unspecified |
| scaffold12206 |
48691 |
48767 |
+ |
RS7413 |
Unspecified |
| scaffold12206 |
48748 |
49318 |
- |
RS27 |
Unspecified |
| scaffold12206 |
48767 |
49238 |
+ |
PL822 |
Unspecified |
| scaffold12206 |
49898 |
49949 |
- |
DNA9-19_Mad |
DNA |
| scaffold12206 |
50784 |
50949 |
+ |
RS4345 |
Unspecified |
| scaffold12206 |
50817 |
50965 |
+ |
RS11502 |
Unspecified |
| scaffold12206 |
51113 |
51154 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12206 |
52736 |
53066 |
+ |
RS5987 |
Unspecified |
| scaffold12206 |
53772 |
53911 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold12206 |
54824 |
54969 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold12206 |
55719 |
55778 |
+ |
(TCTGAG)n |
Simple_repeat |
| scaffold12206 |
56179 |
58018 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold12206 |
58323 |
59402 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold12206 |
59798 |
60104 |
- |
RS13466 |
Unspecified |
| scaffold12206 |
59855 |
60353 |
+ |
PL430 |
Unspecified |
| scaffold12206 |
60096 |
60769 |
+ |
RS456 |
Unspecified |
| scaffold12206 |
60986 |
61030 |
+ |
A-rich |
Low_complexity |
| scaffold12206 |
62024 |
62055 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold12206 |
62167 |
62568 |
+ |
RS2298 |
Unspecified |
| scaffold12206 |
64159 |
64210 |
- |
DNA9-19_Mad |
DNA |
| scaffold12206 |
65047 |
65212 |
+ |
RS4345 |
Unspecified |
| scaffold12206 |
65080 |
65228 |
+ |
RS11502 |
Unspecified |
| scaffold12206 |
65376 |
65417 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12206 |
65835 |
65991 |
+ |
RS7413 |
Unspecified |
| scaffold12206 |
65878 |
66081 |
+ |
RS8730 |
Unspecified |
| scaffold12206 |
66131 |
66306 |
+ |
RS1206 |
Unspecified |
| scaffold12206 |
66551 |
66590 |
+ |
(GTA)n |
Simple_repeat |
| scaffold12206 |
66670 |
67043 |
+ |
RS3702 |
Unspecified |
| scaffold12206 |
67039 |
67177 |
+ |
RS3092 |
Unspecified |
| scaffold12206 |
68223 |
68251 |
+ |
(A)n |
Simple_repeat |
| scaffold12206 |
68636 |
69223 |
- |
RS1132 |
Unspecified |
| scaffold12206 |
69539 |
69596 |
+ |
(TT)n |
Simple_repeat |
| scaffold12206 |
71168 |
71285 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold12206 |
71649 |
71693 |
+ |
PL809 |
Unspecified |
| scaffold12206 |
73990 |
74051 |
+ |
(TTCTCT)n |
Simple_repeat |
| scaffold12206 |
74213 |
74252 |
+ |
(GTTTGT)n |
Simple_repeat |
| scaffold12206 |
74702 |
75023 |
+ |
RS2778 |
Unspecified |
| scaffold12206 |
75618 |
75725 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold12206 |
76308 |
76401 |
- |
MUMT |
DNA/MULE-MuDR |
| scaffold12206 |
77254 |
77361 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold12206 |
77438 |
77454 |
+ |
(T)n |
Simple_repeat |
| scaffold12206 |
77952 |
77977 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold12206 |
78545 |
78676 |
+ |
PL241 |
Unspecified |
| scaffold12206 |
80539 |
81176 |
+ |
PL933 |
Unspecified |
| scaffold12206 |
82177 |
82242 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
83073 |
83138 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
84035 |
85579 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
84035 |
85595 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold12206 |
84390 |
85595 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold12206 |
84423 |
85579 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
85818 |
86089 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
86154 |
86224 |
+ |
Gypsy-4_BD-I |
LTR/Gypsy |
| scaffold12206 |
86656 |
86853 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
87373 |
88364 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold12206 |
88588 |
88988 |
- |
RS911 |
Unspecified |
| scaffold12206 |
88631 |
89087 |
+ |
RS83 |
Unspecified |
| scaffold12206 |
89352 |
89392 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold12206 |
89419 |
89466 |
+ |
A-rich |
Low_complexity |