scaffold12304 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12304 |
23 |
411 |
- |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold12304 |
499 |
912 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12304 |
1421 |
1447 |
+ |
(AAG)n |
Simple_repeat |
| scaffold12304 |
4929 |
5005 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold12304 |
6540 |
6836 |
- |
PL113 |
Unspecified |
| scaffold12304 |
6710 |
6743 |
+ |
(TCAGT)n |
Simple_repeat |
| scaffold12304 |
7532 |
7554 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold12304 |
7712 |
7905 |
- |
RS1829 |
Unspecified |
| scaffold12304 |
7963 |
8128 |
- |
RS38 |
Unspecified |
| scaffold12304 |
8849 |
8983 |
+ |
MtPH-A6-2-Ia |
DNA/PIF-Harbinger |
| scaffold12304 |
9079 |
9121 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold12304 |
9444 |
9486 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12304 |
9608 |
9691 |
- |
RS3465 |
Unspecified |
| scaffold12304 |
9623 |
9691 |
+ |
RS16201 |
Unspecified |
| scaffold12304 |
9877 |
9909 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
10081 |
10116 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
10683 |
11052 |
+ |
RS8 |
Unspecified |
| scaffold12304 |
12435 |
12819 |
- |
RS29 |
Unspecified |
| scaffold12304 |
13539 |
13567 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold12304 |
14266 |
14452 |
- |
RS79 |
Unspecified |
| scaffold12304 |
14744 |
15018 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
14971 |
15018 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
20103 |
20370 |
- |
RS1 |
Unspecified |
| scaffold12304 |
20567 |
20878 |
- |
PL9 |
Unspecified |
| scaffold12304 |
22051 |
22129 |
- |
RS17600 |
Unspecified |
| scaffold12304 |
22887 |
22927 |
+ |
(ACATAA)n |
Simple_repeat |
| scaffold12304 |
23256 |
23294 |
+ |
(AAAGCC)n |
Simple_repeat |
| scaffold12304 |
23466 |
23514 |
+ |
(TCATCG)n |
Simple_repeat |
| scaffold12304 |
23557 |
23622 |
+ |
(GGT)n |
Simple_repeat |
| scaffold12304 |
23858 |
23940 |
+ |
RS750 |
Unspecified |
| scaffold12304 |
24434 |
24481 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
24968 |
24991 |
+ |
(CGA)n |
Simple_repeat |
| scaffold12304 |
25162 |
25216 |
+ |
(GCT)n |
Simple_repeat |
| scaffold12304 |
25345 |
25374 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
25458 |
25488 |
+ |
(ATTTTA)n |
Simple_repeat |
| scaffold12304 |
25722 |
25864 |
- |
RS38 |
Unspecified |
| scaffold12304 |
25746 |
25865 |
- |
RS15316 |
Unspecified |
| scaffold12304 |
26014 |
26053 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
26216 |
26242 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
28183 |
28331 |
- |
RS4797 |
Unspecified |
| scaffold12304 |
29353 |
29477 |
+ |
RS620 |
Unspecified |
| scaffold12304 |
31519 |
31548 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold12304 |
31673 |
32002 |
- |
RS132 |
Unspecified |
| scaffold12304 |
34249 |
34334 |
- |
PL699 |
Unspecified |
| scaffold12304 |
34714 |
34765 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold12304 |
35362 |
35415 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold12304 |
35429 |
35789 |
- |
RS326 |
Unspecified |
| scaffold12304 |
36033 |
36062 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold12304 |
37222 |
37260 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
37399 |
37587 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold12304 |
37588 |
37706 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold12304 |
37752 |
37784 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12304 |
38106 |
38159 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12304 |
38106 |
38267 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12304 |
38144 |
38267 |
- |
RS17927 |
Unspecified |
| scaffold12304 |
39981 |
40010 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
40011 |
40016 |
+ |
(TAT)n |
Simple_repeat |
| scaffold12304 |
40331 |
40641 |
- |
PL81 |
Unspecified |
| scaffold12304 |
40652 |
41129 |
- |
PL81 |
Unspecified |
| scaffold12304 |
42330 |
42623 |
- |
RS326 |
Unspecified |
| scaffold12304 |
42979 |
43034 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
43284 |
43311 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
43606 |
43644 |
+ |
(AAGATTT)n |
Simple_repeat |
| scaffold12304 |
44038 |
44079 |
+ |
(TTTACTT)n |
Simple_repeat |
| scaffold12304 |
44378 |
44409 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold12304 |
44418 |
44478 |
- |
RS16015 |
Unspecified |
| scaffold12304 |
44857 |
44994 |
- |
RS4825 |
Unspecified |
| scaffold12304 |
45012 |
45092 |
- |
RS104 |
Unspecified |
| scaffold12304 |
45033 |
45094 |
+ |
RS1888 |
Unspecified |
| scaffold12304 |
45226 |
45262 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
46262 |
46278 |
+ |
(TAC)n |
Simple_repeat |
| scaffold12304 |
46524 |
46634 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold12304 |
48573 |
48664 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold12304 |
49319 |
49368 |
+ |
(CCA)n |
Simple_repeat |
| scaffold12304 |
51449 |
51474 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
52235 |
52393 |
+ |
RS509 |
Unspecified |
| scaffold12304 |
53465 |
53512 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
55226 |
55400 |
- |
RS79 |
Unspecified |
| scaffold12304 |
56696 |
56714 |
+ |
(CCA)n |
Simple_repeat |
| scaffold12304 |
56715 |
56735 |
+ |
(CT)n |
Simple_repeat |
| scaffold12304 |
56736 |
56820 |
+ |
(CCA)n |
Simple_repeat |
| scaffold12304 |
57054 |
57071 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12304 |
57185 |
57355 |
+ |
(TAA)n |
Simple_repeat |
| scaffold12304 |
61029 |
61198 |
- |
RS133 |
Unspecified |
| scaffold12304 |
61246 |
61406 |
+ |
RS133 |
Unspecified |
| scaffold12304 |
61573 |
61754 |
- |
RS178 |
Unspecified |
| scaffold12304 |
61852 |
61948 |
+ |
RS4475 |
Unspecified |
| scaffold12304 |
62318 |
62355 |
+ |
(TATGGAC)n |
Simple_repeat |
| scaffold12304 |
62701 |
62736 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold12304 |
63257 |
63297 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
63446 |
63903 |
+ |
PL882 |
Unspecified |
| scaffold12304 |
64051 |
64078 |
+ |
(ATATC)n |
Simple_repeat |
| scaffold12304 |
64921 |
64943 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
65456 |
65478 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
65602 |
65620 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
65694 |
65956 |
- |
RS365 |
Unspecified |
| scaffold12304 |
65966 |
66012 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
66098 |
66135 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
66343 |
66376 |
+ |
(TAA)n |
Simple_repeat |
| scaffold12304 |
66640 |
66668 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
70569 |
70590 |
+ |
(ACCA)n |
Simple_repeat |
| scaffold12304 |
71189 |
71226 |
+ |
(TTCTCTC)n |
Simple_repeat |
| scaffold12304 |
71232 |
71654 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12304 |
71232 |
71494 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12304 |
71400 |
71654 |
- |
PL93 |
Unspecified |
| scaffold12304 |
72007 |
72038 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
75269 |
75340 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
75507 |
75523 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
75589 |
75635 |
+ |
(TCATCT)n |
Simple_repeat |
| scaffold12304 |
78771 |
78789 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
79028 |
79059 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
80468 |
80709 |
- |
RS185 |
Unspecified |
| scaffold12304 |
81140 |
81204 |
+ |
(TT)n |
Simple_repeat |
| scaffold12304 |
81420 |
81600 |
- |
RS178 |
Unspecified |
| scaffold12304 |
81810 |
81847 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
82600 |
82628 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold12304 |
82694 |
82957 |
- |
RS356 |
Unspecified |
| scaffold12304 |
83905 |
83929 |
+ |
(ACA)n |
Simple_repeat |
| scaffold12304 |
84348 |
84435 |
- |
RS4475 |
Unspecified |
| scaffold12304 |
84465 |
84514 |
+ |
(TTTTATA)n |
Simple_repeat |
| scaffold12304 |
86037 |
86125 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold12304 |
88880 |
88995 |
- |
RS972 |
Unspecified |
| scaffold12304 |
89051 |
89347 |
- |
PL9 |
Unspecified |
| scaffold12304 |
89385 |
89592 |
+ |
RS86 |
Unspecified |
| scaffold12304 |
90777 |
90820 |
+ |
(TTTTTT)n |
Simple_repeat |
| scaffold12304 |
92651 |
92675 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
99771 |
99793 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
101386 |
101407 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
102555 |
102666 |
+ |
RS492 |
Unspecified |
| scaffold12304 |
103569 |
103581 |
+ |
(CTTTCT)n |
Simple_repeat |
| scaffold12304 |
103582 |
103611 |
+ |
(TC)n |
Simple_repeat |
| scaffold12304 |
103648 |
103695 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12304 |
103741 |
103775 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold12304 |
103990 |
104024 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold12304 |
108035 |
108084 |
+ |
PL68 |
Unspecified |
| scaffold12304 |
108439 |
108480 |
+ |
(CGAGTCC)n |
Simple_repeat |
| scaffold12304 |
110872 |
110930 |
- |
RS727 |
Unspecified |
| scaffold12304 |
113395 |
113457 |
- |
RS1164 |
Unspecified |
| scaffold12304 |
113395 |
113445 |
- |
RS18111 |
Unspecified |
| scaffold12304 |
114292 |
114426 |
+ |
RS7600 |
Unspecified |
| scaffold12304 |
114322 |
114460 |
- |
RS8964 |
Unspecified |
| scaffold12304 |
114454 |
116016 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold12304 |
116189 |
117938 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold12304 |
118144 |
118816 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold12304 |
118915 |
119049 |
+ |
RS7600 |
Unspecified |
| scaffold12304 |
118945 |
119083 |
- |
RS8964 |
Unspecified |
| scaffold12304 |
119080 |
119122 |
+ |
RS8964 |
Unspecified |
| scaffold12304 |
119118 |
119217 |
- |
RS8964 |
Unspecified |
| scaffold12304 |
119301 |
119418 |
+ |
RS17 |
Unspecified |
| scaffold12304 |
119358 |
119426 |
- |
RS16604 |
Unspecified |
| scaffold12304 |
120269 |
120298 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold12304 |
120816 |
120859 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12304 |
122059 |
122104 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
122560 |
122590 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
122592 |
122620 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
122804 |
122832 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
123547 |
123584 |
+ |
(AAAATA)n |
Simple_repeat |
| scaffold12304 |
125493 |
125531 |
+ |
(AATATTA)n |
Simple_repeat |
| scaffold12304 |
128671 |
128682 |
+ |
(ATATAAAA)n |
Simple_repeat |
| scaffold12304 |
128683 |
128708 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
129163 |
129199 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold12304 |
129998 |
130070 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
134680 |
134904 |
- |
RS18 |
Unspecified |
| scaffold12304 |
134979 |
135028 |
+ |
(AATGAA)n |
Simple_repeat |
| scaffold12304 |
135073 |
135094 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
135386 |
135432 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold12304 |
135519 |
135544 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
135882 |
135910 |
+ |
(TGT)n |
Simple_repeat |
| scaffold12304 |
137960 |
138203 |
- |
RS4 |
Unspecified |
| scaffold12304 |
139178 |
139215 |
+ |
(CGTGTC)n |
Simple_repeat |
| scaffold12304 |
139375 |
139400 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
139775 |
139817 |
+ |
(TGATA)n |
Simple_repeat |
| scaffold12304 |
142703 |
142828 |
- |
RS2112 |
Unspecified |
| scaffold12304 |
151534 |
151587 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
151829 |
151836 |
+ |
(TAAAAAA)n |
Simple_repeat |
| scaffold12304 |
151837 |
151863 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
152383 |
152403 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
153160 |
153249 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold12304 |
154333 |
154355 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
155850 |
155913 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
156743 |
156762 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
157086 |
157103 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
157311 |
157359 |
+ |
(AACCGA)n |
Simple_repeat |
| scaffold12304 |
157689 |
157711 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
157814 |
157874 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
158096 |
158149 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
158189 |
158235 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
158285 |
158319 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold12304 |
158328 |
158348 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
158595 |
158774 |
+ |
RS38 |
Unspecified |
| scaffold12304 |
158804 |
158841 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold12304 |
159348 |
159371 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
159741 |
159769 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12304 |
160001 |
160261 |
+ |
RS1 |
Unspecified |
| scaffold12304 |
161676 |
161717 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
161878 |
161896 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
161910 |
162090 |
+ |
RS5 |
Unspecified |
| scaffold12304 |
162379 |
162660 |
+ |
RS342 |
Unspecified |
| scaffold12304 |
163747 |
164166 |
- |
RS1016 |
Unspecified |
| scaffold12304 |
164187 |
164247 |
- |
RS1016 |
Unspecified |
| scaffold12304 |
164967 |
164986 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
165726 |
165783 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold12304 |
166322 |
166392 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
174190 |
174258 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
174379 |
174644 |
- |
BvL1-2 |
LINE/L1 |
| scaffold12304 |
174932 |
174969 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
175204 |
175295 |
+ |
(AATTAAT)n |
Simple_repeat |
| scaffold12304 |
175444 |
175551 |
- |
RS233 |
Unspecified |
| scaffold12304 |
175547 |
175707 |
+ |
RS2719 |
Unspecified |
| scaffold12304 |
176430 |
176473 |
+ |
(AGCTGAA)n |
Simple_repeat |
| scaffold12304 |
176530 |
176587 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12304 |
177469 |
177512 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold12304 |
177528 |
177695 |
- |
hAT-7_PTr |
DNA/hAT-Ac |
| scaffold12304 |
178166 |
178259 |
- |
RS16382 |
Unspecified |
| scaffold12304 |
178742 |
178785 |
+ |
(TGACATT)n |
Simple_repeat |
| scaffold12304 |
179416 |
179623 |
+ |
RS1129 |
Unspecified |
| scaffold12304 |
179625 |
179786 |
+ |
RS145 |
Unspecified |
| scaffold12304 |
179889 |
179979 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
180292 |
180385 |
+ |
LT1_EPa |
LTR? |
| scaffold12304 |
180631 |
180732 |
+ |
RS10063 |
Unspecified |
| scaffold12304 |
181972 |
182022 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
182272 |
182280 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold12304 |
182281 |
182375 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold12304 |
182376 |
182382 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold12304 |
182400 |
182498 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold12304 |
182606 |
182701 |
+ |
RS2233 |
Unspecified |
| scaffold12304 |
183571 |
183677 |
+ |
RS14164 |
Unspecified |
| scaffold12304 |
184731 |
184766 |
+ |
(CTTGAA)n |
Simple_repeat |
| scaffold12304 |
186807 |
186916 |
+ |
RS2233 |
Unspecified |
| scaffold12304 |
187836 |
187942 |
+ |
RS14164 |
Unspecified |
| scaffold12304 |
188174 |
188203 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
190820 |
190853 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold12304 |
190980 |
191016 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold12304 |
191139 |
191175 |
+ |
(CAATT)n |
Simple_repeat |
| scaffold12304 |
192761 |
192795 |
+ |
(CAAGAAG)n |
Simple_repeat |
| scaffold12304 |
193224 |
193339 |
- |
RS16382 |
Unspecified |
| scaffold12304 |
193875 |
194128 |
+ |
RS586 |
Unspecified |
| scaffold12304 |
194128 |
194164 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
194355 |
194592 |
- |
RS782 |
Unspecified |
| scaffold12304 |
194894 |
194958 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
194977 |
195003 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
196210 |
196379 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold12304 |
196676 |
196698 |
+ |
(TCT)n |
Simple_repeat |
| scaffold12304 |
197773 |
197805 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
199130 |
199306 |
- |
RS163 |
Unspecified |
| scaffold12304 |
199745 |
199781 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12304 |
200414 |
200509 |
- |
RS16382 |
Unspecified |
| scaffold12304 |
202177 |
202548 |
- |
PL270 |
Unspecified |
| scaffold12304 |
203160 |
203179 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
204040 |
204157 |
- |
LT1_EPa |
LTR? |
| scaffold12304 |
204341 |
204357 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
210887 |
211119 |
+ |
RS16888 |
Unspecified |
| scaffold12304 |
212012 |
212156 |
+ |
RS115 |
Unspecified |
| scaffold12304 |
212341 |
212383 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
212566 |
212608 |
+ |
(TATT)n |
Simple_repeat |
| scaffold12304 |
212723 |
212774 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
212844 |
212942 |
- |
RS4475 |
Unspecified |
| scaffold12304 |
213065 |
213185 |
- |
RS4475 |
Unspecified |
| scaffold12304 |
213392 |
213416 |
+ |
(AAAC)n |
Simple_repeat |
| scaffold12304 |
214246 |
214427 |
- |
RS79 |
Unspecified |
| scaffold12304 |
214506 |
214568 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold12304 |
215629 |
215732 |
- |
RS1 |
Unspecified |
| scaffold12304 |
217014 |
217041 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold12304 |
217133 |
217228 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
217570 |
217701 |
- |
RS3320 |
Unspecified |
| scaffold12304 |
218086 |
218335 |
+ |
RS10 |
Unspecified |
| scaffold12304 |
219434 |
219450 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
227747 |
227799 |
+ |
ATLINEIII |
LINE/L1 |
| scaffold12304 |
227756 |
227827 |
+ |
MuDR-N1_ZM |
DNA/MULE-MuDR |
| scaffold12304 |
227828 |
227881 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
228607 |
228629 |
+ |
(AGT)n |
Simple_repeat |
| scaffold12304 |
231733 |
231753 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
231778 |
231823 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
232268 |
232482 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12304 |
232268 |
232358 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12304 |
232338 |
232482 |
+ |
RS2504 |
Unspecified |
| scaffold12304 |
232564 |
232621 |
+ |
(AATTCT)n |
Simple_repeat |
| scaffold12304 |
233275 |
233341 |
+ |
RS7405 |
Unspecified |
| scaffold12304 |
234044 |
234081 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
234830 |
234852 |
+ |
(AGT)n |
Simple_repeat |
| scaffold12304 |
237956 |
237976 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
238001 |
238046 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
238491 |
238581 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12304 |
238491 |
238705 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12304 |
238561 |
238705 |
+ |
RS2504 |
Unspecified |
| scaffold12304 |
238787 |
238844 |
+ |
(AATTCT)n |
Simple_repeat |
| scaffold12304 |
239498 |
239752 |
+ |
RS7405 |
Unspecified |
| scaffold12304 |
240309 |
240326 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
240848 |
241085 |
+ |
RS16888 |
Unspecified |
| scaffold12304 |
241675 |
241707 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold12304 |
241858 |
241880 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
242843 |
242859 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
245068 |
245335 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold12304 |
245945 |
246126 |
- |
RS13085 |
Unspecified |
| scaffold12304 |
246584 |
246621 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12304 |
246651 |
246684 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
246685 |
246719 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
246735 |
246785 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
246815 |
246844 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
246849 |
246875 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
247233 |
247259 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
250025 |
250046 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
252233 |
252298 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
255437 |
255462 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
256196 |
256259 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold12304 |
258265 |
258304 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold12304 |
266227 |
266278 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
267720 |
267810 |
+ |
ATRAN |
DNA? |
| scaffold12304 |
268578 |
268610 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold12304 |
268618 |
268656 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
268721 |
268764 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
268857 |
269074 |
+ |
(TT)n |
Simple_repeat |
| scaffold12304 |
268857 |
268910 |
+ |
(TT)n |
Simple_repeat |
| scaffold12304 |
268899 |
269074 |
- |
RS16206 |
Unspecified |
| scaffold12304 |
269540 |
269575 |
+ |
GA-rich |
Low_complexity |
| scaffold12304 |
270236 |
270359 |
- |
PL53 |
Unspecified |
| scaffold12304 |
270251 |
270829 |
+ |
PL8 |
Unspecified |
| scaffold12304 |
270948 |
271124 |
- |
RS5 |
Unspecified |
| scaffold12304 |
271358 |
271442 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12304 |
271864 |
271915 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
272209 |
272257 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold12304 |
272617 |
272638 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12304 |
277017 |
277055 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12304 |
277183 |
277241 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold12304 |
277676 |
277760 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
280106 |
280188 |
+ |
(ATATAAT)n |
Simple_repeat |
| scaffold12304 |
280608 |
280664 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold12304 |
280752 |
280808 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold12304 |
281523 |
281573 |
- |
RS18111 |
Unspecified |
| scaffold12304 |
283442 |
283472 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
284723 |
284754 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
285360 |
285376 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
286115 |
286138 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
287394 |
287527 |
- |
RS324 |
Unspecified |
| scaffold12304 |
287613 |
287653 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold12304 |
288094 |
288166 |
+ |
A-rich |
Low_complexity |
| scaffold12304 |
288168 |
288198 |
+ |
(AGA)n |
Simple_repeat |
| scaffold12304 |
289642 |
289906 |
+ |
RS356 |
Unspecified |
| scaffold12304 |
289873 |
289916 |
+ |
RS4475 |
Unspecified |
| scaffold12304 |
292440 |
292479 |
+ |
(AT)n |
Simple_repeat |
| scaffold12304 |
293593 |
293615 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12304 |
293791 |
294314 |
+ |
PL269 |
Unspecified |
| scaffold12304 |
294501 |
294521 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
295876 |
295905 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold12304 |
299305 |
299326 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold12304 |
300346 |
300448 |
- |
RS16382 |
Unspecified |
| scaffold12304 |
304469 |
304511 |
+ |
(GTG)n |
Simple_repeat |
| scaffold12304 |
305587 |
305756 |
- |
RS8115 |
Unspecified |
| scaffold12304 |
305929 |
306055 |
- |
RS7389 |
Unspecified |
| scaffold12304 |
306338 |
306608 |
+ |
RS8425 |
Unspecified |
| scaffold12304 |
306977 |
307383 |
- |
RS9536 |
Unspecified |
| scaffold12304 |
307168 |
307531 |
- |
RS11273 |
Unspecified |
| scaffold12304 |
307694 |
307876 |
- |
RS12689 |
Unspecified |
| scaffold12304 |
308082 |
308109 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
308965 |
308990 |
+ |
(CGGCC)n |
Simple_repeat |
| scaffold12304 |
309111 |
309317 |
- |
RS14640 |
Unspecified |
| scaffold12304 |
309747 |
309865 |
- |
RS8115 |
Unspecified |
| scaffold12304 |
309890 |
310016 |
- |
RS7389 |
Unspecified |
| scaffold12304 |
310048 |
310219 |
+ |
PL3 |
Unspecified |
| scaffold12304 |
310216 |
310410 |
+ |
PL3 |
Unspecified |
| scaffold12304 |
310433 |
310632 |
+ |
PL688 |
Unspecified |
| scaffold12304 |
310780 |
311097 |
- |
RS2543 |
Unspecified |
| scaffold12304 |
311571 |
311835 |
+ |
RS8425 |
Unspecified |
| scaffold12304 |
312185 |
312596 |
- |
RS9536 |
Unspecified |
| scaffold12304 |
312381 |
312728 |
- |
RS11273 |
Unspecified |
| scaffold12304 |
312731 |
313094 |
- |
RS11273 |
Unspecified |
| scaffold12304 |
313264 |
313446 |
- |
RS12689 |
Unspecified |
| scaffold12304 |
313977 |
314002 |
+ |
(T)n |
Simple_repeat |
| scaffold12304 |
314376 |
314417 |
+ |
(TCACTCG)n |
Simple_repeat |
| scaffold12304 |
314962 |
315036 |
+ |
RS6922 |
Unspecified |
| scaffold12304 |
315039 |
315146 |
- |
RS5869 |
Unspecified |
| scaffold12304 |
315065 |
315188 |
+ |
RS14731 |
Unspecified |
| scaffold12304 |
315369 |
315394 |
+ |
(A)n |
Simple_repeat |
| scaffold12304 |
315463 |
315570 |
- |
RS2839 |
Unspecified |
| scaffold12304 |
315900 |
316095 |
- |
RS11830 |
Unspecified |
| scaffold12304 |
316168 |
316364 |
+ |
RS30 |
Unspecified |
| scaffold12304 |
316411 |
316535 |
+ |
RS6922 |
Unspecified |
| scaffold12304 |
316429 |
316563 |
+ |
RS5449 |
Unspecified |
| scaffold12304 |
316545 |
316614 |
- |
RS4111 |
Unspecified |
| scaffold12304 |
316605 |
316732 |
- |
RS4739 |
Unspecified |
| scaffold12304 |
316750 |
316839 |
- |
RS5189 |
Unspecified |
| scaffold12304 |
318662 |
318874 |
+ |
(CAG)n |
Simple_repeat |
| scaffold12304 |
321655 |
321808 |
- |
RS4289 |
Unspecified |
| scaffold12304 |
322163 |
322221 |
+ |
DNA-TA-2_STu |
DNA/TcMar-Stowaway |
| scaffold12304 |
322173 |
322271 |
- |
STOWAWAY20_SB |
DNA/TcMar-Stowaway |
| scaffold12304 |
324314 |
324571 |
- |
RS5335 |
Unspecified |
| scaffold12304 |
324617 |
324812 |
+ |
RS4480 |
Unspecified |
| scaffold12304 |
324898 |
325126 |
- |
RS1602 |
Unspecified |
| scaffold12304 |
324965 |
325147 |
+ |
RS3862 |
Unspecified |
| scaffold12304 |
325388 |
325439 |
+ |
(AATTA)n |
Simple_repeat |