scaffold12387 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12387 |
1550 |
1623 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
3004 |
3030 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
3348 |
3395 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
4218 |
4286 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold12387 |
4288 |
4385 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12387 |
4386 |
4480 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12387 |
4509 |
4583 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold12387 |
4961 |
4996 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
5011 |
5376 |
+ |
RS8 |
Unspecified |
| scaffold12387 |
5874 |
6033 |
+ |
RS886 |
Unspecified |
| scaffold12387 |
6301 |
6371 |
+ |
RS4863 |
Unspecified |
| scaffold12387 |
6314 |
6977 |
+ |
RS2288 |
Unspecified |
| scaffold12387 |
6314 |
7090 |
- |
PL646 |
Unspecified |
| scaffold12387 |
6596 |
7118 |
+ |
PL556 |
Unspecified |
| scaffold12387 |
7511 |
7535 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
8301 |
8327 |
+ |
(AACTC)n |
Simple_repeat |
| scaffold12387 |
8333 |
8378 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
8407 |
8437 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
8503 |
8546 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
9019 |
9065 |
+ |
RS17805 |
Unspecified |
| scaffold12387 |
9174 |
9505 |
- |
PL319 |
Unspecified |
| scaffold12387 |
9668 |
9704 |
+ |
(TTTCACT)n |
Simple_repeat |
| scaffold12387 |
10287 |
10335 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
10358 |
10383 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12387 |
11088 |
11132 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
11750 |
11802 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold12387 |
11883 |
11925 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
12055 |
12316 |
- |
RS26 |
Unspecified |
| scaffold12387 |
12315 |
12824 |
- |
RS630 |
Unspecified |
| scaffold12387 |
13166 |
13411 |
- |
RS4 |
Unspecified |
| scaffold12387 |
13553 |
13588 |
+ |
(CTC)n |
Simple_repeat |
| scaffold12387 |
13630 |
13691 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12387 |
14589 |
14641 |
+ |
(TGTTATAT)n |
Simple_repeat |
| scaffold12387 |
15236 |
15339 |
+ |
RS14311 |
Unspecified |
| scaffold12387 |
15394 |
15429 |
+ |
(CTC)n |
Simple_repeat |
| scaffold12387 |
15471 |
15532 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12387 |
16088 |
17021 |
+ |
RS14622 |
Unspecified |
| scaffold12387 |
17089 |
17192 |
+ |
RS14311 |
Unspecified |
| scaffold12387 |
21531 |
21558 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
21578 |
21617 |
+ |
(TAA)n |
Simple_repeat |
| scaffold12387 |
22294 |
22408 |
+ |
RS614 |
Unspecified |
| scaffold12387 |
22585 |
22655 |
+ |
RS1082 |
Unspecified |
| scaffold12387 |
22729 |
22759 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
23044 |
23112 |
+ |
GA-rich |
Low_complexity |
| scaffold12387 |
23547 |
23633 |
+ |
RS318 |
Unspecified |
| scaffold12387 |
23967 |
24006 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
24297 |
24532 |
+ |
RS18 |
Unspecified |
| scaffold12387 |
24704 |
24724 |
+ |
(TATT)n |
Simple_repeat |
| scaffold12387 |
25024 |
25054 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold12387 |
28661 |
28692 |
+ |
(CCAAAC)n |
Simple_repeat |
| scaffold12387 |
29105 |
29131 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
29591 |
29622 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold12387 |
29623 |
29628 |
+ |
(ATATATT)n |
Simple_repeat |
| scaffold12387 |
29699 |
29730 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
30684 |
30777 |
- |
RS549 |
Unspecified |
| scaffold12387 |
30905 |
31038 |
- |
COPI1_LTR |
LTR/Copia |
| scaffold12387 |
32605 |
32633 |
+ |
GA-rich |
Low_complexity |
| scaffold12387 |
35703 |
35742 |
+ |
LINE1-32_SBi |
LINE/L1 |
| scaffold12387 |
35989 |
36153 |
+ |
RS178 |
Unspecified |
| scaffold12387 |
36141 |
36374 |
- |
RS1045 |
Unspecified |
| scaffold12387 |
36371 |
36437 |
+ |
RS3555 |
Unspecified |
| scaffold12387 |
36553 |
36714 |
- |
RS7958 |
Unspecified |
| scaffold12387 |
36879 |
36954 |
- |
RS7958 |
Unspecified |
| scaffold12387 |
37155 |
37245 |
+ |
(ATTTGAA)n |
Simple_repeat |
| scaffold12387 |
37647 |
37694 |
+ |
(ATATTTT)n |
Simple_repeat |
| scaffold12387 |
37764 |
37798 |
+ |
(TATT)n |
Simple_repeat |
| scaffold12387 |
41547 |
42311 |
+ |
RS1680 |
Unspecified |
| scaffold12387 |
41813 |
42438 |
- |
RS2610 |
Unspecified |
| scaffold12387 |
42453 |
42685 |
+ |
RS1178 |
Unspecified |
| scaffold12387 |
42484 |
42646 |
- |
RS2640 |
Unspecified |
| scaffold12387 |
42529 |
42684 |
- |
RS1680 |
Unspecified |
| scaffold12387 |
42725 |
42840 |
- |
RS9376 |
Unspecified |
| scaffold12387 |
42855 |
42990 |
- |
RS11410 |
Unspecified |
| scaffold12387 |
43055 |
43311 |
- |
RS13987 |
Unspecified |
| scaffold12387 |
43317 |
43681 |
- |
RS10286 |
Unspecified |
| scaffold12387 |
43676 |
43812 |
- |
RS10286 |
Unspecified |
| scaffold12387 |
43814 |
43893 |
+ |
(AACAAGA)n |
Simple_repeat |
| scaffold12387 |
44388 |
44589 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
44598 |
45163 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
45179 |
45234 |
+ |
(TGG)n |
Simple_repeat |
| scaffold12387 |
46197 |
46870 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
46197 |
46259 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
46242 |
46870 |
- |
PL876 |
Unspecified |
| scaffold12387 |
46869 |
47057 |
- |
PL255 |
Unspecified |
| scaffold12387 |
48393 |
48494 |
+ |
EnSpm-2_TD |
DNA/CMC-EnSpm |
| scaffold12387 |
48809 |
48862 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold12387 |
48972 |
49049 |
+ |
(TGT)n |
Simple_repeat |
| scaffold12387 |
49661 |
49787 |
+ |
RS12118 |
Unspecified |
| scaffold12387 |
49806 |
49910 |
+ |
RS9627 |
Unspecified |
| scaffold12387 |
49911 |
50201 |
+ |
RS7067 |
Unspecified |
| scaffold12387 |
52055 |
52138 |
+ |
(A)n |
Simple_repeat |
| scaffold12387 |
52203 |
52437 |
+ |
RS581 |
Unspecified |
| scaffold12387 |
54450 |
55381 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
55390 |
55467 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
55858 |
55886 |
+ |
A-rich |
Low_complexity |
| scaffold12387 |
55917 |
56504 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
56015 |
56907 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
56916 |
57534 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
57016 |
57645 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
57120 |
58049 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
58058 |
58661 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
58149 |
58772 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
58248 |
59177 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
59186 |
59789 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
59277 |
59905 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
59376 |
60304 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
60313 |
60930 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
60413 |
61041 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
60517 |
61409 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
61418 |
62013 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
62017 |
62199 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
62208 |
62817 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
62299 |
62928 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
63072 |
63110 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
63489 |
63517 |
+ |
(T)n |
Simple_repeat |
| scaffold12387 |
63742 |
64332 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
63833 |
64443 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
63937 |
64845 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
64854 |
65472 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
64954 |
65583 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
65058 |
65911 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
65920 |
66526 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
66011 |
66637 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
66114 |
67036 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
67045 |
67650 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
67145 |
67760 |
- |
RS2723 |
Unspecified |
| scaffold12387 |
67249 |
68132 |
+ |
RS4153 |
Unspecified |
| scaffold12387 |
68141 |
68242 |
- |
RS1938 |
Unspecified |
| scaffold12387 |
69015 |
69059 |
+ |
(TCAC)n |
Simple_repeat |
| scaffold12387 |
70657 |
70697 |
+ |
(ACGAAAC)n |
Simple_repeat |
| scaffold12387 |
71028 |
71149 |
- |
Gypsy-23_ST-LTR |
LTR/Gypsy |
| scaffold12387 |
72199 |
73294 |
+ |
PL585 |
Unspecified |
| scaffold12387 |
73291 |
73696 |
- |
RS616 |
Unspecified |
| scaffold12387 |
73520 |
73745 |
+ |
PL880 |
Unspecified |
| scaffold12387 |
73941 |
74759 |
+ |
RS3148 |
Unspecified |
| scaffold12387 |
74754 |
75473 |
+ |
RS3148 |
Unspecified |
| scaffold12387 |
75810 |
76130 |
- |
RS8781 |
Unspecified |
| scaffold12387 |
76152 |
76176 |
+ |
(AGA)n |
Simple_repeat |
| scaffold12387 |
76958 |
77063 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold12387 |
78015 |
79911 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |