scaffold1243 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1243 |
33 |
943 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold1243 |
5132 |
5864 |
- |
Copia-4_GM-I |
LTR/Copia |
| scaffold1243 |
5921 |
6231 |
- |
RS7618 |
Unspecified |
| scaffold1243 |
6302 |
6777 |
+ |
PL883 |
Unspecified |
| scaffold1243 |
7481 |
7689 |
+ |
RS14966 |
Unspecified |
| scaffold1243 |
8365 |
8510 |
+ |
PL883 |
Unspecified |
| scaffold1243 |
8506 |
8778 |
- |
RS3218 |
Unspecified |
| scaffold1243 |
9424 |
10534 |
+ |
RS306 |
Unspecified |
| scaffold1243 |
10025 |
10807 |
+ |
RS172 |
Unspecified |
| scaffold1243 |
11310 |
11439 |
+ |
(TA)n |
Simple_repeat |
| scaffold1243 |
12970 |
13479 |
- |
RS454 |
Unspecified |
| scaffold1243 |
13481 |
13537 |
- |
RS454 |
Unspecified |
| scaffold1243 |
14213 |
14267 |
- |
RS172 |
Unspecified |
| scaffold1243 |
14258 |
14774 |
- |
PL160 |
Unspecified |
| scaffold1243 |
14826 |
15308 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold1243 |
14971 |
15304 |
+ |
LINE1-60_SBi |
LINE/L1 |
| scaffold1243 |
15326 |
15451 |
+ |
ATLINE1_8 |
LINE/L1 |
| scaffold1243 |
16004 |
16370 |
+ |
RS9793 |
Unspecified |
| scaffold1243 |
17088 |
17379 |
- |
RS1686 |
Unspecified |
| scaffold1243 |
17869 |
17923 |
+ |
L1-23_CPa |
LINE/L1 |
| scaffold1243 |
18317 |
18338 |
+ |
(A)n |
Simple_repeat |
| scaffold1243 |
18317 |
18893 |
+ |
(A)n |
Simple_repeat |
| scaffold1243 |
18331 |
18893 |
+ |
RS266 |
Unspecified |
| scaffold1243 |
20985 |
21096 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1243 |
21587 |
21630 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
22808 |
22900 |
- |
ATHILA6C_I-int |
LTR/Gypsy |
| scaffold1243 |
23514 |
23574 |
+ |
(TTTGTGT)n |
Simple_repeat |
| scaffold1243 |
24335 |
24391 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
24622 |
24699 |
+ |
(CATCAT)n |
Simple_repeat |
| scaffold1243 |
24899 |
25515 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1243 |
25564 |
25600 |
+ |
(CCTTCT)n |
Simple_repeat |
| scaffold1243 |
25620 |
25867 |
- |
RS2554 |
Unspecified |
| scaffold1243 |
26519 |
26604 |
- |
HAT-N16_Mad |
DNA/hAT-Tip100 |
| scaffold1243 |
27364 |
27547 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1243 |
29207 |
29460 |
+ |
PL564 |
Unspecified |
| scaffold1243 |
29777 |
30646 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold1243 |
31994 |
32072 |
+ |
RS17927 |
Unspecified |
| scaffold1243 |
32643 |
32668 |
+ |
(AG)n |
Simple_repeat |
| scaffold1243 |
33925 |
33989 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold1243 |
35785 |
36144 |
+ |
RS5479 |
Unspecified |
| scaffold1243 |
38054 |
38600 |
+ |
RS1835 |
Unspecified |
| scaffold1243 |
38596 |
40659 |
- |
RS1686 |
Unspecified |
| scaffold1243 |
40683 |
40692 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold1243 |
40693 |
40740 |
+ |
(TTTGTG)n |
Simple_repeat |
| scaffold1243 |
41482 |
41518 |
+ |
(GAAAAA)n |
Simple_repeat |
| scaffold1243 |
41766 |
41849 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1243 |
41993 |
42668 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1243 |
42751 |
43320 |
+ |
RS1930 |
Unspecified |
| scaffold1243 |
42849 |
43512 |
+ |
RS661 |
Unspecified |
| scaffold1243 |
42876 |
43382 |
+ |
RS1549 |
Unspecified |
| scaffold1243 |
42963 |
43571 |
+ |
RS1207 |
Unspecified |
| scaffold1243 |
43836 |
43864 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1243 |
43864 |
43897 |
+ |
(AGCA)n |
Simple_repeat |
| scaffold1243 |
44031 |
44443 |
- |
RS403 |
Unspecified |
| scaffold1243 |
44435 |
44525 |
- |
PL599 |
Unspecified |
| scaffold1243 |
44520 |
44584 |
+ |
RS14 |
Unspecified |
| scaffold1243 |
44529 |
44588 |
- |
RS403 |
Unspecified |
| scaffold1243 |
44588 |
45223 |
- |
PL599 |
Unspecified |
| scaffold1243 |
45221 |
45729 |
- |
PL599 |
Unspecified |
| scaffold1243 |
46378 |
46441 |
- |
Gypsy69-ZM_I-int |
LTR/Gypsy |
| scaffold1243 |
50547 |
50574 |
+ |
(GGT)n |
Simple_repeat |
| scaffold1243 |
50622 |
50768 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1243 |
50688 |
50719 |
+ |
(AGAGGA)n |
Simple_repeat |
| scaffold1243 |
51442 |
51528 |
+ |
RS12011 |
Unspecified |
| scaffold1243 |
52234 |
52252 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold1243 |
52253 |
52323 |
+ |
(GTATCGGGA)n |
Simple_repeat |
| scaffold1243 |
52324 |
52373 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold1243 |
53199 |
53291 |
+ |
RS1854 |
Unspecified |
| scaffold1243 |
53226 |
53396 |
+ |
RS17860 |
Unspecified |
| scaffold1243 |
54533 |
54575 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
55048 |
55072 |
+ |
(A)n |
Simple_repeat |
| scaffold1243 |
55501 |
55608 |
- |
RS8095 |
Unspecified |
| scaffold1243 |
56269 |
56438 |
- |
PL436 |
Unspecified |
| scaffold1243 |
56470 |
56616 |
- |
TWIF |
DNA/hAT-Ac |
| scaffold1243 |
56715 |
56787 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
57128 |
57200 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold1243 |
57226 |
57466 |
+ |
RS93 |
Unspecified |
| scaffold1243 |
61137 |
61278 |
+ |
PL836 |
Unspecified |
| scaffold1243 |
62620 |
62795 |
+ |
RS179 |
Unspecified |
| scaffold1243 |
65144 |
65178 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1243 |
65242 |
65364 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1243 |
65419 |
65439 |
+ |
(GTT)n |
Simple_repeat |
| scaffold1243 |
66887 |
67068 |
- |
RS79 |
Unspecified |
| scaffold1243 |
67117 |
67144 |
+ |
G-rich |
Low_complexity |
| scaffold1243 |
68743 |
68928 |
+ |
RS4 |
Unspecified |
| scaffold1243 |
69165 |
69193 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold1243 |
69514 |
69530 |
+ |
(T)n |
Simple_repeat |
| scaffold1243 |
70435 |
70461 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1243 |
71405 |
71448 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1243 |
71858 |
71896 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold1243 |
71897 |
71938 |
+ |
(TTTTTTTTTA)n |
Simple_repeat |
| scaffold1243 |
71939 |
71968 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold1243 |
73198 |
73234 |
+ |
(TTTCGAC)n |
Simple_repeat |
| scaffold1243 |
77133 |
77203 |
+ |
RS12885 |
Unspecified |
| scaffold1243 |
78091 |
78184 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
78295 |
78328 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
78598 |
78650 |
+ |
(GCC)n |
Simple_repeat |
| scaffold1243 |
79216 |
79237 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold1243 |
81116 |
81918 |
- |
RS108 |
Unspecified |
| scaffold1243 |
85738 |
85903 |
+ |
RS11790 |
Unspecified |
| scaffold1243 |
85785 |
85919 |
+ |
RS15602 |
Unspecified |
| scaffold1243 |
85989 |
86244 |
+ |
RS13168 |
Unspecified |
| scaffold1243 |
86403 |
86461 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1243 |
86456 |
86583 |
- |
RS3521 |
Unspecified |
| scaffold1243 |
87456 |
87572 |
+ |
PL375 |
Unspecified |
| scaffold1243 |
87690 |
87723 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
88040 |
88075 |
+ |
(AATTATG)n |
Simple_repeat |
| scaffold1243 |
88393 |
88489 |
- |
RS4475 |
Unspecified |
| scaffold1243 |
88680 |
88715 |
+ |
(ATGTT)n |
Simple_repeat |
| scaffold1243 |
88869 |
88909 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
89183 |
89343 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1243 |
90389 |
90432 |
+ |
(TT)n |
Simple_repeat |
| scaffold1243 |
90804 |
90905 |
- |
RS4475 |
Unspecified |
| scaffold1243 |
92455 |
92487 |
+ |
(CTTTAT)n |
Simple_repeat |
| scaffold1243 |
92494 |
92813 |
+ |
RS17077 |
Unspecified |
| scaffold1243 |
93129 |
93158 |
+ |
(AGAAAT)n |
Simple_repeat |
| scaffold1243 |
93249 |
93473 |
- |
PL689 |
Unspecified |
| scaffold1243 |
94435 |
94575 |
- |
PL753 |
Unspecified |
| scaffold1243 |
95621 |
95639 |
+ |
(A)n |
Simple_repeat |
| scaffold1243 |
95858 |
95895 |
+ |
GA-rich |
Low_complexity |
| scaffold1243 |
96064 |
96088 |
+ |
(TAG)n |
Simple_repeat |
| scaffold1243 |
97725 |
97826 |
+ |
RS12360 |
Unspecified |
| scaffold1243 |
100250 |
100421 |
+ |
RS178 |
Unspecified |
| scaffold1243 |
100611 |
100632 |
+ |
(T)n |
Simple_repeat |
| scaffold1243 |
101083 |
101192 |
+ |
RS178 |
Unspecified |
| scaffold1243 |
102379 |
102642 |
- |
RS356 |
Unspecified |
| scaffold1243 |
104741 |
104802 |
- |
RS16382 |
Unspecified |
| scaffold1243 |
105687 |
105771 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold1243 |
106018 |
106058 |
+ |
A-rich |
Low_complexity |
| scaffold1243 |
106642 |
106666 |
+ |
(A)n |
Simple_repeat |
| scaffold1243 |
106667 |
106705 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1243 |
107485 |
107516 |
+ |
(CCATA)n |
Simple_repeat |
| scaffold1243 |
108391 |
108443 |
- |
RS109 |
Unspecified |
| scaffold1243 |
108946 |
108979 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold1243 |
109616 |
109712 |
- |
RS193 |
Unspecified |
| scaffold1243 |
110409 |
111274 |
- |
RS758 |
Unspecified |
| scaffold1243 |
111242 |
111477 |
+ |
RS1121 |
Unspecified |
| scaffold1243 |
111629 |
111784 |
- |
RS193 |
Unspecified |
| scaffold1243 |
112096 |
112188 |
- |
RS4475 |
Unspecified |