scaffold12664 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12664 |
905 |
929 |
+ |
(AATG)n |
Simple_repeat |
| scaffold12664 |
1026 |
2599 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
2822 |
4453 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12664 |
3038 |
3811 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
4101 |
4150 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
4262 |
4336 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
4595 |
4900 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12664 |
4688 |
5512 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12664 |
4996 |
5042 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
5406 |
5505 |
- |
Copia-97_STu-I |
LTR/Copia |
| scaffold12664 |
6011 |
6088 |
+ |
(TGCTGA)n |
Simple_repeat |
| scaffold12664 |
6059 |
6083 |
+ |
(AATG)n |
Simple_repeat |
| scaffold12664 |
6185 |
6406 |
+ |
RS12231 |
Unspecified |
| scaffold12664 |
7440 |
7828 |
+ |
RS29 |
Unspecified |
| scaffold12664 |
8273 |
8302 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12664 |
9858 |
10079 |
+ |
RS12231 |
Unspecified |
| scaffold12664 |
10671 |
10699 |
+ |
(CCGGC)n |
Simple_repeat |
| scaffold12664 |
10807 |
10856 |
+ |
(ACCCGG)n |
Simple_repeat |
| scaffold12664 |
10864 |
10897 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold12664 |
10948 |
10991 |
+ |
(TATTTAG)n |
Simple_repeat |
| scaffold12664 |
11160 |
11294 |
+ |
(ACCCGG)n |
Simple_repeat |
| scaffold12664 |
11777 |
11809 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
13479 |
13583 |
+ |
RS17002 |
Unspecified |
| scaffold12664 |
15578 |
15709 |
+ |
RS16569 |
Unspecified |
| scaffold12664 |
16022 |
16152 |
- |
REP-1_ZM |
Unknown |
| scaffold12664 |
16771 |
16792 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
17196 |
17245 |
+ |
(TAA)n |
Simple_repeat |
| scaffold12664 |
17598 |
17636 |
+ |
(AT)n |
Simple_repeat |
| scaffold12664 |
17782 |
17819 |
+ |
(TACGATA)n |
Simple_repeat |
| scaffold12664 |
21441 |
21464 |
+ |
(A)n |
Simple_repeat |
| scaffold12664 |
22188 |
22228 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold12664 |
22239 |
22456 |
+ |
RS3651 |
Unspecified |
| scaffold12664 |
22765 |
22792 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
22929 |
22968 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold12664 |
23859 |
23939 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold12664 |
25874 |
26141 |
- |
RS10 |
Unspecified |
| scaffold12664 |
26328 |
26535 |
+ |
RS2790 |
Unspecified |
| scaffold12664 |
26698 |
26735 |
+ |
(A)n |
Simple_repeat |
| scaffold12664 |
26965 |
27006 |
+ |
(ATCCGAA)n |
Simple_repeat |
| scaffold12664 |
27070 |
27148 |
+ |
(TTGGATA)n |
Simple_repeat |
| scaffold12664 |
27194 |
27241 |
+ |
RS14358 |
Unspecified |
| scaffold12664 |
28473 |
28530 |
+ |
RS5530 |
Unspecified |
| scaffold12664 |
28598 |
28654 |
+ |
GA-rich |
Low_complexity |
| scaffold12664 |
28718 |
28871 |
- |
PL9 |
Unspecified |
| scaffold12664 |
29141 |
29219 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
29342 |
29372 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
29831 |
29863 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
31457 |
31526 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
35906 |
35929 |
+ |
(A)n |
Simple_repeat |
| scaffold12664 |
36339 |
36352 |
+ |
(TCTTCC)n |
Simple_repeat |
| scaffold12664 |
36353 |
36404 |
+ |
(TTC)n |
Simple_repeat |
| scaffold12664 |
36405 |
36410 |
+ |
(TCTTCC)n |
Simple_repeat |
| scaffold12664 |
40435 |
40695 |
+ |
RS109 |
Unspecified |
| scaffold12664 |
41123 |
41161 |
+ |
GA-rich |
Low_complexity |
| scaffold12664 |
41696 |
41733 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
41749 |
41768 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
41864 |
41884 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold12664 |
44581 |
44635 |
- |
Gypsy-63_GM-I |
LTR/Gypsy |
| scaffold12664 |
47646 |
47785 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
47916 |
48052 |
- |
RS3305 |
Unspecified |
| scaffold12664 |
49401 |
49551 |
- |
RS2493 |
Unspecified |
| scaffold12664 |
49430 |
49574 |
+ |
RS10379 |
Unspecified |
| scaffold12664 |
50118 |
50196 |
+ |
G-rich |
Low_complexity |
| scaffold12664 |
50254 |
50537 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold12664 |
50562 |
50746 |
+ |
(TTAGGG)n |
Simple_repeat |
| scaffold12664 |
50858 |
50900 |
+ |
(GGGGTTG)n |
Simple_repeat |
| scaffold12664 |
50927 |
50981 |
+ |
RS5503 |
Unspecified |
| scaffold12664 |
50927 |
50998 |
- |
RS2717 |
Unspecified |
| scaffold12664 |
51001 |
51057 |
- |
RS234 |
Unspecified |
| scaffold12664 |
51703 |
51720 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
51851 |
51883 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold12664 |
52166 |
52189 |
+ |
(A)n |
Simple_repeat |
| scaffold12664 |
52558 |
52814 |
+ |
RS932 |
Unspecified |
| scaffold12664 |
53257 |
53301 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12664 |
53522 |
53542 |
+ |
(T)n |
Simple_repeat |
| scaffold12664 |
53836 |
53854 |
+ |
(A)n |
Simple_repeat |
| scaffold12664 |
54154 |
54234 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
54727 |
54766 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold12664 |
55085 |
55115 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold12664 |
63167 |
63193 |
+ |
GA-rich |
Low_complexity |
| scaffold12664 |
63582 |
63612 |
+ |
A-rich |
Low_complexity |
| scaffold12664 |
64145 |
64188 |
+ |
(AATT)n |
Simple_repeat |
| scaffold12664 |
64759 |
64852 |
- |
RS16382 |
Unspecified |