scaffold12672 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12672 |
496 |
941 |
- |
MTIS112A |
DNA/PIF-Harbinger |
| scaffold12672 |
4474 |
4574 |
+ |
GYPOT1_I-int |
LTR/Gypsy |
| scaffold12672 |
4811 |
6466 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold12672 |
4867 |
4896 |
+ |
A-rich |
Low_complexity |
| scaffold12672 |
4956 |
4974 |
+ |
(TA)n |
Simple_repeat |
| scaffold12672 |
5773 |
5844 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold12672 |
6326 |
6360 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12672 |
6815 |
6991 |
+ |
PL870 |
Unspecified |
| scaffold12672 |
6991 |
7416 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold12672 |
8884 |
8911 |
+ |
(T)n |
Simple_repeat |
| scaffold12672 |
9326 |
9424 |
+ |
A-rich |
Low_complexity |
| scaffold12672 |
10191 |
10486 |
+ |
RS299 |
Unspecified |
| scaffold12672 |
12580 |
12875 |
- |
RS6147 |
Unspecified |
| scaffold12672 |
13568 |
13735 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold12672 |
13591 |
13679 |
- |
Gypsy-2-I_TA |
LTR/Gypsy |
| scaffold12672 |
16019 |
16124 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold12672 |
17066 |
17102 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold12672 |
17683 |
17994 |
- |
RS69 |
Unspecified |
| scaffold12672 |
18679 |
18719 |
+ |
(TGTATT)n |
Simple_repeat |
| scaffold12672 |
19171 |
19223 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold12672 |
21649 |
21915 |
- |
RS2804 |
Unspecified |
| scaffold12672 |
22834 |
22850 |
+ |
(CCT)n |
Simple_repeat |
| scaffold12672 |
23051 |
23109 |
+ |
(ACA)n |
Simple_repeat |
| scaffold12672 |
23389 |
23417 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold12672 |
27373 |
27389 |
+ |
(TTG)n |
Simple_repeat |
| scaffold12672 |
27763 |
27799 |
+ |
A-rich |
Low_complexity |
| scaffold12672 |
28212 |
28331 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold12672 |
28918 |
28987 |
+ |
A-rich |
Low_complexity |
| scaffold12672 |
29636 |
29685 |
+ |
ATHILA-5_SBi-I |
LTR/Gypsy |
| scaffold12672 |
30015 |
30047 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold12672 |
30075 |
30125 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold12672 |
30906 |
30964 |
+ |
(CAAGGT)n |
Simple_repeat |
| scaffold12672 |
32086 |
32519 |
+ |
RS1494 |
Unspecified |
| scaffold12672 |
33177 |
33388 |
+ |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold12672 |
34121 |
35051 |
- |
PL808 |
Unspecified |
| scaffold12672 |
35059 |
35111 |
+ |
(TTG)n |
Simple_repeat |
| scaffold12672 |
35398 |
36048 |
- |
RS121 |
Unspecified |
| scaffold12672 |
35587 |
36699 |
- |
RS247 |
Unspecified |
| scaffold12672 |
36725 |
36755 |
+ |
(TGT)n |
Simple_repeat |
| scaffold12672 |
36758 |
37945 |
- |
RS2579 |
Unspecified |
| scaffold12672 |
37563 |
38046 |
+ |
PL113 |
Unspecified |
| scaffold12672 |
37887 |
38143 |
+ |
RS2047 |
Unspecified |
| scaffold12672 |
38216 |
38292 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold12672 |
38484 |
38639 |
+ |
RS911 |
Unspecified |
| scaffold12672 |
39041 |
39165 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold12672 |
39857 |
39985 |
- |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold12672 |
40664 |
40698 |
+ |
(TGTTT)n |
Simple_repeat |
| scaffold12672 |
40881 |
40947 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold12672 |
42633 |
42752 |
- |
RS1631 |
Unspecified |
| scaffold12672 |
43030 |
43961 |
+ |
PL129 |
Unspecified |
| scaffold12672 |
44335 |
44385 |
+ |
(GTGTTTC)n |
Simple_repeat |
| scaffold12672 |
44517 |
44833 |
- |
RS1463 |
Unspecified |
| scaffold12672 |
44560 |
44834 |
- |
RS247 |
Unspecified |
| scaffold12672 |
45235 |
46358 |
- |
RS488 |
Unspecified |
| scaffold12672 |
46370 |
46460 |
+ |
G-rich |
Low_complexity |
| scaffold12672 |
46620 |
46772 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold12672 |
46788 |
47167 |
- |
RS488 |
Unspecified |
| scaffold12672 |
46875 |
47317 |
- |
RS1545 |
Unspecified |
| scaffold12672 |
47142 |
47357 |
- |
RS9613 |
Unspecified |
| scaffold12672 |
48110 |
48199 |
- |
Copia-83_PT-LTR |
LTR/Copia |
| scaffold12672 |
49024 |
49672 |
+ |
PL802 |
Unspecified |