scaffold12683 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12683 |
76 |
398 |
+ |
RS1898 |
Unspecified |
| scaffold12683 |
394 |
439 |
+ |
RS1898 |
Unspecified |
| scaffold12683 |
536 |
908 |
+ |
RS2295 |
Unspecified |
| scaffold12683 |
1042 |
1584 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold12683 |
1055 |
1513 |
+ |
(AGCCTC)n |
Simple_repeat |
| scaffold12683 |
1517 |
1563 |
+ |
(AACCTG)n |
Simple_repeat |
| scaffold12683 |
1776 |
1841 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold12683 |
2461 |
2500 |
+ |
(TG)n |
Simple_repeat |
| scaffold12683 |
3744 |
4108 |
- |
TPN1_IN |
DNA/CMC-EnSpm |
| scaffold12683 |
4230 |
4265 |
- |
Arnold2 |
DNA/MULE-MuDR |
| scaffold12683 |
4988 |
5013 |
+ |
(AAACT)n |
Simple_repeat |
| scaffold12683 |
5119 |
5422 |
+ |
RS8040 |
Unspecified |
| scaffold12683 |
5560 |
5590 |
- |
EnSpm2_HV |
DNA/CMC-EnSpm |
| scaffold12683 |
5606 |
5854 |
+ |
RS2382 |
Unspecified |
| scaffold12683 |
5903 |
5948 |
+ |
(TCTTCAA)n |
Simple_repeat |
| scaffold12683 |
6222 |
6517 |
+ |
RS4714 |
Unspecified |
| scaffold12683 |
6571 |
6603 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
6643 |
6731 |
+ |
RS5874 |
Unspecified |
| scaffold12683 |
7081 |
7282 |
+ |
RS18 |
Unspecified |
| scaffold12683 |
7375 |
7478 |
- |
HAT-N8_Mad |
DNA/hAT-Tag1 |
| scaffold12683 |
7645 |
7719 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold12683 |
7730 |
7767 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
7798 |
7847 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold12683 |
7848 |
7918 |
+ |
(GTATCGGGA)n |
Simple_repeat |
| scaffold12683 |
7919 |
7976 |
- |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold12683 |
9963 |
10017 |
+ |
(TTCCCC)n |
Simple_repeat |
| scaffold12683 |
10162 |
11019 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold12683 |
10623 |
10656 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
11570 |
11617 |
+ |
(TCCC)n |
Simple_repeat |
| scaffold12683 |
11871 |
11932 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
14985 |
15401 |
+ |
RS506 |
Unspecified |
| scaffold12683 |
15783 |
15831 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold12683 |
16019 |
16089 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold12683 |
16519 |
16587 |
+ |
(TATG)n |
Simple_repeat |
| scaffold12683 |
16670 |
16786 |
+ |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold12683 |
17237 |
17266 |
+ |
(TTGAG)n |
Simple_repeat |
| scaffold12683 |
17326 |
17569 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold12683 |
17473 |
17569 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold12683 |
17473 |
17734 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold12683 |
17542 |
17734 |
+ |
RS2327 |
Unspecified |
| scaffold12683 |
19430 |
19958 |
+ |
PL969 |
Unspecified |
| scaffold12683 |
19520 |
20301 |
+ |
RS1154 |
Unspecified |
| scaffold12683 |
20301 |
20352 |
+ |
(AACATC)n |
Simple_repeat |
| scaffold12683 |
20488 |
20530 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
20551 |
20968 |
- |
PL143 |
Unspecified |
| scaffold12683 |
20841 |
21130 |
- |
RS4686 |
Unspecified |
| scaffold12683 |
23068 |
23109 |
+ |
(GATT)n |
Simple_repeat |
| scaffold12683 |
25151 |
25184 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
25256 |
25313 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
25549 |
25612 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
25855 |
25893 |
+ |
(TTTATTTTT)n |
Simple_repeat |
| scaffold12683 |
30158 |
30181 |
+ |
(A)n |
Simple_repeat |
| scaffold12683 |
32741 |
32778 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold12683 |
33486 |
33718 |
+ |
(CACCAA)n |
Simple_repeat |
| scaffold12683 |
33676 |
33718 |
+ |
(CACCAA)n |
Simple_repeat |
| scaffold12683 |
34004 |
34053 |
+ |
(ACGAGC)n |
Simple_repeat |
| scaffold12683 |
34177 |
34214 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold12683 |
34530 |
34657 |
- |
PL903 |
Unspecified |
| scaffold12683 |
34531 |
34676 |
+ |
PL743 |
Unspecified |
| scaffold12683 |
34653 |
34692 |
- |
PL903 |
Unspecified |
| scaffold12683 |
34665 |
34794 |
+ |
PL743 |
Unspecified |
| scaffold12683 |
35824 |
36140 |
- |
RS90 |
Unspecified |
| scaffold12683 |
36372 |
36666 |
- |
RS90 |
Unspecified |
| scaffold12683 |
36483 |
37414 |
+ |
RS379 |
Unspecified |
| scaffold12683 |
37148 |
37505 |
+ |
RS12812 |
Unspecified |
| scaffold12683 |
39770 |
39980 |
- |
RS90 |
Unspecified |
| scaffold12683 |
41196 |
41280 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold12683 |
42396 |
43166 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12683 |
42744 |
43532 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold12683 |
43089 |
43116 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
43261 |
43517 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold12683 |
43538 |
44508 |
+ |
RS4087 |
Unspecified |
| scaffold12683 |
45772 |
46871 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold12683 |
47061 |
48573 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold12683 |
49772 |
49880 |
- |
PL911 |
Unspecified |
| scaffold12683 |
49875 |
50990 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold12683 |
49891 |
50607 |
- |
MuDR3_ZM |
DNA/MULE-MuDR |
| scaffold12683 |
51387 |
51465 |
- |
RS4179 |
Unspecified |
| scaffold12683 |
51520 |
51645 |
- |
RS4179 |
Unspecified |
| scaffold12683 |
51620 |
51681 |
- |
RS4179 |
Unspecified |
| scaffold12683 |
51733 |
51847 |
- |
RS4179 |
Unspecified |
| scaffold12683 |
51895 |
52055 |
- |
RS8413 |
Unspecified |
| scaffold12683 |
52612 |
52633 |
+ |
(TA)n |
Simple_repeat |
| scaffold12683 |
52671 |
52696 |
+ |
(TA)n |
Simple_repeat |
| scaffold12683 |
53417 |
53578 |
- |
RS1546 |
Unspecified |
| scaffold12683 |
54114 |
54279 |
+ |
PL637 |
Unspecified |
| scaffold12683 |
54454 |
54486 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
54923 |
54971 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
55111 |
55200 |
+ |
(CCTCCTT)n |
Simple_repeat |
| scaffold12683 |
55235 |
55345 |
+ |
(AAC)n |
Simple_repeat |
| scaffold12683 |
55621 |
55781 |
- |
RS4933 |
Unspecified |
| scaffold12683 |
55661 |
55792 |
- |
RS1052 |
Unspecified |
| scaffold12683 |
55868 |
56083 |
- |
RS3267 |
Unspecified |
| scaffold12683 |
56229 |
56427 |
+ |
RS2146 |
Unspecified |
| scaffold12683 |
56792 |
56881 |
+ |
RS9875 |
Unspecified |
| scaffold12683 |
57132 |
57234 |
+ |
RS9875 |
Unspecified |
| scaffold12683 |
57236 |
57332 |
- |
RS8684 |
Unspecified |
| scaffold12683 |
57720 |
57783 |
+ |
A-rich |
Low_complexity |
| scaffold12683 |
57860 |
57902 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold12683 |
58364 |
58530 |
+ |
(TATAAG)n |
Simple_repeat |
| scaffold12683 |
58538 |
58611 |
+ |
(TGAATAG)n |
Simple_repeat |
| scaffold12683 |
59490 |
59796 |
- |
RS5093 |
Unspecified |
| scaffold12683 |
59960 |
59987 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
59960 |
60371 |
+ |
(T)n |
Simple_repeat |
| scaffold12683 |
59977 |
60371 |
+ |
RS9181 |
Unspecified |
| scaffold12683 |
60286 |
60522 |
+ |
RS9279 |
Unspecified |
| scaffold12683 |
60788 |
60824 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold12683 |
60930 |
61031 |
+ |
RS17927 |
Unspecified |
| scaffold12683 |
61036 |
61110 |
+ |
(A)n |
Simple_repeat |
| scaffold12683 |
61297 |
61534 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12683 |
61396 |
61534 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12683 |
61536 |
61584 |
+ |
(TAT)n |
Simple_repeat |
| scaffold12683 |
63348 |
63368 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold12683 |
63539 |
63590 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold12683 |
63627 |
63654 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold12683 |
64028 |
64135 |
- |
RS11501 |
Unspecified |
| scaffold12683 |
64610 |
64661 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12683 |
64932 |
65001 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12683 |
65466 |
65518 |
+ |
(TTA)n |
Simple_repeat |
| scaffold12683 |
65945 |
66008 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12683 |
66167 |
66309 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12683 |
66360 |
67682 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold12683 |
67850 |
67872 |
+ |
(A)n |
Simple_repeat |
| scaffold12683 |
68028 |
68083 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold12683 |
68709 |
68730 |
+ |
(AAC)n |
Simple_repeat |
| scaffold12683 |
68731 |
68777 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12683 |
68778 |
68855 |
+ |
(AAC)n |
Simple_repeat |
| scaffold12683 |
69044 |
69086 |
+ |
(CT)n |
Simple_repeat |
| scaffold12683 |
69370 |
69413 |
+ |
(TTCGAT)n |
Simple_repeat |
| scaffold12683 |
70198 |
70249 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12683 |
70519 |
70588 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12683 |
70814 |
70978 |
+ |
RS5401 |
Unspecified |
| scaffold12683 |
71018 |
71275 |
- |
RS8045 |
Unspecified |