scaffold1270 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1270 |
20 |
84 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold1270 |
85 |
112 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold1270 |
377 |
484 |
+ |
PL827 |
Unspecified |
| scaffold1270 |
427 |
626 |
+ |
RS1717 |
Unspecified |
| scaffold1270 |
578 |
775 |
+ |
RS1717 |
Unspecified |
| scaffold1270 |
727 |
903 |
+ |
RS1717 |
Unspecified |
| scaffold1270 |
747 |
923 |
- |
RS11744 |
Unspecified |
| scaffold1270 |
4594 |
4620 |
+ |
(TC)n |
Simple_repeat |
| scaffold1270 |
4915 |
4936 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
5388 |
5561 |
- |
RS233 |
Unspecified |
| scaffold1270 |
5407 |
5567 |
+ |
RS2719 |
Unspecified |
| scaffold1270 |
5829 |
5867 |
+ |
(TTTATAA)n |
Simple_repeat |
| scaffold1270 |
6017 |
6089 |
+ |
(TTT)n |
Simple_repeat |
| scaffold1270 |
6177 |
6250 |
+ |
(AATTATA)n |
Simple_repeat |
| scaffold1270 |
7085 |
7136 |
- |
PL688 |
Unspecified |
| scaffold1270 |
7135 |
7170 |
- |
PL688 |
Unspecified |
| scaffold1270 |
7209 |
7250 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold1270 |
8013 |
8240 |
- |
RS18 |
Unspecified |
| scaffold1270 |
8214 |
8894 |
+ |
RS39 |
Unspecified |
| scaffold1270 |
9976 |
10021 |
- |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold1270 |
10371 |
10778 |
+ |
RS1371 |
Unspecified |
| scaffold1270 |
10476 |
11052 |
+ |
RS1368 |
Unspecified |
| scaffold1270 |
11017 |
11479 |
+ |
RS2107 |
Unspecified |
| scaffold1270 |
11531 |
11718 |
+ |
RS2377 |
Unspecified |
| scaffold1270 |
11721 |
11831 |
- |
RS2014 |
Unspecified |
| scaffold1270 |
11900 |
11923 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
13684 |
13981 |
+ |
MuDR-5_EPa |
DNA/MULE-MuDR |
| scaffold1270 |
14373 |
14580 |
+ |
ATMU2 |
DNA/MULE-MuDR |
| scaffold1270 |
14821 |
15444 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold1270 |
14927 |
15338 |
+ |
MuDR-7_Mad |
DNA/MULE-MuDR |
| scaffold1270 |
16907 |
17070 |
+ |
RS2014 |
Unspecified |
| scaffold1270 |
18169 |
18225 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold1270 |
18582 |
18625 |
+ |
(CAACTT)n |
Simple_repeat |
| scaffold1270 |
19353 |
19419 |
+ |
(AAGATAA)n |
Simple_repeat |
| scaffold1270 |
19464 |
19942 |
- |
PL350 |
Unspecified |
| scaffold1270 |
19993 |
20382 |
+ |
A-rich |
Low_complexity |
| scaffold1270 |
19993 |
20068 |
+ |
A-rich |
Low_complexity |
| scaffold1270 |
20042 |
20382 |
+ |
PL866 |
Unspecified |
| scaffold1270 |
20268 |
20403 |
+ |
RS12398 |
Unspecified |
| scaffold1270 |
20382 |
20512 |
- |
RS2452 |
Unspecified |
| scaffold1270 |
21078 |
21257 |
+ |
(AAGTAT)n |
Simple_repeat |
| scaffold1270 |
21296 |
21398 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold1270 |
22558 |
22864 |
- |
RS2639 |
Unspecified |
| scaffold1270 |
22849 |
23004 |
+ |
RS1708 |
Unspecified |
| scaffold1270 |
23000 |
23408 |
- |
PL802 |
Unspecified |
| scaffold1270 |
24567 |
24662 |
+ |
ATLINE2 |
LINE/L1 |
| scaffold1270 |
24768 |
25009 |
+ |
L1-5_CPa |
LINE/L1 |
| scaffold1270 |
28014 |
28170 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold1270 |
28362 |
30061 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold1270 |
30380 |
31570 |
+ |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold1270 |
31842 |
32092 |
- |
RS2985 |
Unspecified |
| scaffold1270 |
31918 |
32210 |
+ |
RS90 |
Unspecified |
| scaffold1270 |
32287 |
32835 |
+ |
RS508 |
Unspecified |
| scaffold1270 |
36416 |
36657 |
- |
RS4303 |
Unspecified |
| scaffold1270 |
36643 |
36865 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
36848 |
36865 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
37543 |
37593 |
+ |
A-rich |
Low_complexity |
| scaffold1270 |
37678 |
38062 |
+ |
PL513 |
Unspecified |
| scaffold1270 |
38086 |
38246 |
- |
PL283 |
Unspecified |
| scaffold1270 |
38239 |
38350 |
+ |
RS16911 |
Unspecified |
| scaffold1270 |
38260 |
38353 |
+ |
RS16382 |
Unspecified |
| scaffold1270 |
38353 |
38406 |
+ |
(AATATG)n |
Simple_repeat |
| scaffold1270 |
39058 |
39105 |
+ |
(TCTT)n |
Simple_repeat |
| scaffold1270 |
39282 |
39298 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
39299 |
39463 |
- |
PL178 |
Unspecified |
| scaffold1270 |
39525 |
39592 |
+ |
A-rich |
Low_complexity |
| scaffold1270 |
40480 |
40506 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1270 |
41829 |
41970 |
- |
RS13392 |
Unspecified |
| scaffold1270 |
41883 |
42005 |
- |
RS6691 |
Unspecified |
| scaffold1270 |
42016 |
42098 |
+ |
(CCG)n |
Simple_repeat |
| scaffold1270 |
42865 |
42918 |
+ |
(TT)n |
Simple_repeat |
| scaffold1270 |
43199 |
43230 |
+ |
(T)n |
Simple_repeat |
| scaffold1270 |
43369 |
43418 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1270 |
44040 |
44068 |
+ |
(A)n |
Simple_repeat |
| scaffold1270 |
44069 |
44117 |
+ |
(T)n |
Simple_repeat |
| scaffold1270 |
45689 |
45723 |
+ |
A-rich |
Low_complexity |
| scaffold1270 |
46059 |
46100 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1270 |
46754 |
46778 |
+ |
(T)n |
Simple_repeat |
| scaffold1270 |
46987 |
47026 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1270 |
47411 |
47513 |
- |
RS3146 |
Unspecified |
| scaffold1270 |
48443 |
48627 |
+ |
RS178 |
Unspecified |
| scaffold1270 |
49091 |
49199 |
+ |
(AATTTAA)n |
Simple_repeat |
| scaffold1270 |
49888 |
49952 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1270 |
49996 |
50055 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1270 |
50593 |
50911 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold1270 |
50993 |
51403 |
+ |
COP_I_MT-int |
LTR/Copia |
| scaffold1270 |
53825 |
54225 |
+ |
PL436 |
Unspecified |
| scaffold1270 |
54346 |
54843 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1270 |
55459 |
55865 |
- |
RS655 |
Unspecified |
| scaffold1270 |
56401 |
56743 |
+ |
RS1184 |
Unspecified |
| scaffold1270 |
56777 |
56830 |
+ |
(TTTTCGT)n |
Simple_repeat |
| scaffold1270 |
56948 |
58351 |
- |
RS357 |
Unspecified |
| scaffold1270 |
58588 |
58623 |
+ |
(TGTGAT)n |
Simple_repeat |
| scaffold1270 |
58970 |
59014 |
+ |
(GTGTTTG)n |
Simple_repeat |
| scaffold1270 |
59095 |
59139 |
+ |
(GTGTTTG)n |
Simple_repeat |
| scaffold1270 |
59313 |
60905 |
- |
RS151 |
Unspecified |
| scaffold1270 |
61087 |
61123 |
+ |
(TTGCTT)n |
Simple_repeat |
| scaffold1270 |
61124 |
61141 |
+ |
(TTTTTG)n |
Simple_repeat |
| scaffold1270 |
61421 |
61671 |
+ |
RS12409 |
Unspecified |
| scaffold1270 |
61902 |
62031 |
- |
RS192 |
Unspecified |
| scaffold1270 |
61911 |
62061 |
+ |
RS3113 |
Unspecified |
| scaffold1270 |
61979 |
62124 |
+ |
RS3113 |
Unspecified |
| scaffold1270 |
62000 |
62094 |
- |
RS192 |
Unspecified |
| scaffold1270 |
62027 |
62504 |
- |
RS192 |
Unspecified |
| scaffold1270 |
76311 |
76402 |
- |
RS201 |
Unspecified |