scaffold1272 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1272 |
3657 |
3683 |
+ |
(A)n |
Simple_repeat |
| scaffold1272 |
4695 |
4837 |
+ |
RS8478 |
Unspecified |
| scaffold1272 |
5798 |
5828 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold1272 |
6371 |
6411 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
9321 |
9523 |
+ |
RS13821 |
Unspecified |
| scaffold1272 |
10326 |
10461 |
+ |
RS15195 |
Unspecified |
| scaffold1272 |
10499 |
10701 |
+ |
RS13821 |
Unspecified |
| scaffold1272 |
11481 |
11616 |
+ |
RS15195 |
Unspecified |
| scaffold1272 |
12461 |
12504 |
+ |
(AATTGTG)n |
Simple_repeat |
| scaffold1272 |
12530 |
12673 |
+ |
RS7012 |
Unspecified |
| scaffold1272 |
12903 |
13013 |
- |
RS9626 |
Unspecified |
| scaffold1272 |
13332 |
13563 |
- |
RS1186 |
Unspecified |
| scaffold1272 |
13431 |
13632 |
+ |
RS15364 |
Unspecified |
| scaffold1272 |
13943 |
13970 |
+ |
(ATCT)n |
Simple_repeat |
| scaffold1272 |
14053 |
14070 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
14133 |
14198 |
+ |
(ATACTTT)n |
Simple_repeat |
| scaffold1272 |
15372 |
15396 |
+ |
(C)n |
Simple_repeat |
| scaffold1272 |
15402 |
16868 |
- |
Copia-74_ST-I |
LTR/Copia |
| scaffold1272 |
17260 |
18040 |
- |
Copia-74_ST-I |
LTR/Copia |
| scaffold1272 |
18454 |
19041 |
- |
Copia-74_ST-I |
LTR/Copia |
| scaffold1272 |
19366 |
19390 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold1272 |
19404 |
19500 |
+ |
RS17344 |
Unspecified |
| scaffold1272 |
19646 |
19670 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold1272 |
19684 |
19788 |
+ |
RS17344 |
Unspecified |
| scaffold1272 |
19793 |
19937 |
+ |
RS13093 |
Unspecified |
| scaffold1272 |
20085 |
20192 |
+ |
RS12585 |
Unspecified |
| scaffold1272 |
21432 |
21632 |
+ |
PL663 |
Unspecified |
| scaffold1272 |
22106 |
22191 |
- |
RS6602 |
Unspecified |
| scaffold1272 |
23450 |
23600 |
+ |
RS13247 |
Unspecified |
| scaffold1272 |
23601 |
23985 |
+ |
RS306 |
Unspecified |
| scaffold1272 |
23842 |
24709 |
+ |
RS306 |
Unspecified |
| scaffold1272 |
24170 |
24973 |
+ |
RS172 |
Unspecified |
| scaffold1272 |
25463 |
25569 |
+ |
RS7108 |
Unspecified |
| scaffold1272 |
27261 |
27493 |
+ |
RS260 |
Unspecified |
| scaffold1272 |
31330 |
31487 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold1272 |
32122 |
32167 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
32602 |
32625 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1272 |
32785 |
32895 |
+ |
RS9626 |
Unspecified |
| scaffold1272 |
33128 |
33172 |
- |
RS7012 |
Unspecified |
| scaffold1272 |
34028 |
34052 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
34256 |
34323 |
+ |
(ATTAT)n |
Simple_repeat |
| scaffold1272 |
34332 |
34583 |
- |
RS186 |
Unspecified |
| scaffold1272 |
34579 |
34675 |
- |
RS16382 |
Unspecified |
| scaffold1272 |
34674 |
34801 |
- |
RS186 |
Unspecified |
| scaffold1272 |
34950 |
35021 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold1272 |
39423 |
39482 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold1272 |
40701 |
40743 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
41283 |
41361 |
+ |
(TCA)n |
Simple_repeat |
| scaffold1272 |
41354 |
41444 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1272 |
41616 |
41868 |
- |
RS8834 |
Unspecified |
| scaffold1272 |
42182 |
42238 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold1272 |
42267 |
42308 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
42309 |
42331 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1272 |
43265 |
43423 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1272 |
43265 |
43322 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1272 |
43265 |
43417 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1272 |
43303 |
43417 |
- |
PL754 |
Unspecified |
| scaffold1272 |
43316 |
43423 |
+ |
RS4475 |
Unspecified |
| scaffold1272 |
43320 |
43415 |
- |
RS16382 |
Unspecified |
| scaffold1272 |
43467 |
43550 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1272 |
43627 |
43665 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
44111 |
44169 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold1272 |
44566 |
44674 |
+ |
RS18086 |
Unspecified |
| scaffold1272 |
44988 |
45158 |
+ |
RS573 |
Unspecified |
| scaffold1272 |
47162 |
47199 |
+ |
(TTCCT)n |
Simple_repeat |
| scaffold1272 |
52127 |
52168 |
+ |
(A)n |
Simple_repeat |
| scaffold1272 |
52498 |
52534 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
61434 |
61474 |
- |
DNA8-1_Mad |
DNA/hAT-Tip100 |
| scaffold1272 |
61991 |
62072 |
+ |
RS7380 |
Unspecified |
| scaffold1272 |
62216 |
62244 |
+ |
(CAC)n |
Simple_repeat |
| scaffold1272 |
62766 |
63145 |
+ |
PL469 |
Unspecified |
| scaffold1272 |
63463 |
63494 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold1272 |
63500 |
63667 |
+ |
hAT-7_PTr |
DNA/hAT-Ac |
| scaffold1272 |
64096 |
64200 |
+ |
HAT-N12_Mad |
DNA/hAT-Ac |
| scaffold1272 |
64325 |
64394 |
+ |
GA-rich |
Low_complexity |
| scaffold1272 |
65568 |
65788 |
+ |
RS13348 |
Unspecified |
| scaffold1272 |
66386 |
66428 |
+ |
(AATCTC)n |
Simple_repeat |
| scaffold1272 |
66543 |
66650 |
- |
RS3551 |
Unspecified |
| scaffold1272 |
66892 |
66956 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
67094 |
67152 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
67286 |
67329 |
+ |
(AATATGA)n |
Simple_repeat |
| scaffold1272 |
68332 |
68436 |
+ |
PL877 |
Unspecified |
| scaffold1272 |
69552 |
70006 |
- |
RS1545 |
Unspecified |
| scaffold1272 |
69636 |
70012 |
+ |
RS1707 |
Unspecified |
| scaffold1272 |
72619 |
72753 |
+ |
PL368 |
Unspecified |
| scaffold1272 |
72640 |
72778 |
- |
PL368 |
Unspecified |
| scaffold1272 |
73434 |
73463 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold1272 |
75270 |
75516 |
+ |
RS365 |
Unspecified |
| scaffold1272 |
76911 |
77004 |
- |
PL139 |
Unspecified |
| scaffold1272 |
76928 |
77156 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold1272 |
78256 |
78393 |
- |
RS7405 |
Unspecified |
| scaffold1272 |
78390 |
78493 |
- |
RS26 |
Unspecified |
| scaffold1272 |
78493 |
78721 |
- |
RS26 |
Unspecified |
| scaffold1272 |
78723 |
78906 |
- |
RS38 |
Unspecified |
| scaffold1272 |
79740 |
79928 |
+ |
RS429 |
Unspecified |
| scaffold1272 |
80611 |
80630 |
+ |
(TCT)n |
Simple_repeat |
| scaffold1272 |
81350 |
81407 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
81625 |
81813 |
- |
RS10669 |
Unspecified |
| scaffold1272 |
81947 |
81980 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold1272 |
84897 |
85005 |
+ |
RS8041 |
Unspecified |
| scaffold1272 |
85203 |
85220 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
86253 |
86294 |
+ |
(TGG)n |
Simple_repeat |
| scaffold1272 |
86315 |
86344 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
86553 |
86608 |
+ |
(AACATAC)n |
Simple_repeat |
| scaffold1272 |
86843 |
86864 |
+ |
(A)n |
Simple_repeat |
| scaffold1272 |
87811 |
87975 |
+ |
RS686 |
Unspecified |
| scaffold1272 |
89456 |
89518 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
89586 |
89614 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
89688 |
89717 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold1272 |
90159 |
91295 |
- |
RS259 |
Unspecified |
| scaffold1272 |
91339 |
91602 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1272 |
91493 |
91623 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold1272 |
91802 |
91846 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold1272 |
92362 |
92774 |
- |
RS262 |
Unspecified |
| scaffold1272 |
92672 |
92855 |
+ |
RS5392 |
Unspecified |
| scaffold1272 |
93112 |
93246 |
- |
RS262 |
Unspecified |
| scaffold1272 |
93247 |
93602 |
+ |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold1272 |
93767 |
93824 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
94172 |
94216 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1272 |
94238 |
94293 |
+ |
(AACTTG)n |
Simple_repeat |
| scaffold1272 |
94676 |
94742 |
- |
Gypsy18-PTR_I-int |
LTR/Gypsy |
| scaffold1272 |
95169 |
95206 |
+ |
(TTCCAACA)n |
Simple_repeat |
| scaffold1272 |
95277 |
95585 |
+ |
RS15876 |
Unspecified |
| scaffold1272 |
95871 |
96074 |
+ |
RS4498 |
Unspecified |
| scaffold1272 |
95996 |
96176 |
+ |
RS6753 |
Unspecified |
| scaffold1272 |
96431 |
96466 |
+ |
(GATG)n |
Simple_repeat |
| scaffold1272 |
96896 |
96955 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
97011 |
97055 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1272 |
97058 |
97133 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
97206 |
97511 |
- |
RS155 |
Unspecified |
| scaffold1272 |
97811 |
98637 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold1272 |
98044 |
98637 |
+ |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold1272 |
99405 |
99443 |
+ |
(TTATCTC)n |
Simple_repeat |
| scaffold1272 |
100187 |
100225 |
+ |
(TTATCTC)n |
Simple_repeat |
| scaffold1272 |
100467 |
100971 |
- |
PL255 |
Unspecified |
| scaffold1272 |
103684 |
103781 |
- |
RS35 |
Unspecified |
| scaffold1272 |
104155 |
104413 |
+ |
RS237 |
Unspecified |
| scaffold1272 |
104606 |
104727 |
+ |
RS8384 |
Unspecified |
| scaffold1272 |
104760 |
104871 |
+ |
RS11658 |
Unspecified |
| scaffold1272 |
108144 |
109121 |
- |
Copia-72_ST-I |
LTR/Copia |
| scaffold1272 |
109180 |
109218 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
110255 |
110285 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
110779 |
110816 |
+ |
(T)n |
Simple_repeat |
| scaffold1272 |
111093 |
111416 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1272 |
111632 |
111695 |
+ |
A-rich |
Low_complexity |
| scaffold1272 |
113385 |
113492 |
- |
RS5110 |
Unspecified |
| scaffold1272 |
113647 |
113690 |
+ |
RS133 |
Unspecified |
| scaffold1272 |
113690 |
113985 |
+ |
RS518 |
Unspecified |
| scaffold1272 |
113989 |
114134 |
- |
RS133 |
Unspecified |
| scaffold1272 |
114571 |
114607 |
+ |
(TAATTT)n |
Simple_repeat |
| scaffold1272 |
114778 |
115305 |
- |
RS463 |
Unspecified |
| scaffold1272 |
116019 |
116066 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold1272 |
116245 |
116297 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1272 |
117219 |
117246 |
+ |
(A)n |
Simple_repeat |
| scaffold1272 |
118417 |
118448 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold1272 |
119036 |
119130 |
- |
RS16382 |
Unspecified |
| scaffold1272 |
119222 |
119260 |
+ |
(TTT)n |
Simple_repeat |
| scaffold1272 |
119609 |
119835 |
- |
RS2809 |
Unspecified |
| scaffold1272 |
119851 |
120025 |
+ |
RS4 |
Unspecified |
| scaffold1272 |
121448 |
121494 |
+ |
(ATC)n |
Simple_repeat |
| scaffold1272 |
122243 |
122282 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold1272 |
122473 |
122677 |
- |
RS12638 |
Unspecified |
| scaffold1272 |
122934 |
122959 |
+ |
(A)n |
Simple_repeat |
| scaffold1272 |
124472 |
124534 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold1272 |
124617 |
125154 |
+ |
PL89 |
Unspecified |
| scaffold1272 |
124620 |
125052 |
- |
PL800 |
Unspecified |
| scaffold1272 |
125121 |
125606 |
+ |
RS4063 |
Unspecified |
| scaffold1272 |
125165 |
125701 |
- |
RS11258 |
Unspecified |
| scaffold1272 |
125778 |
125808 |
+ |
(AATAC)n |
Simple_repeat |
| scaffold1272 |
125843 |
126188 |
+ |
RS1396 |
Unspecified |
| scaffold1272 |
126767 |
126797 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1272 |
127147 |
127276 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold1272 |
127560 |
127633 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold1272 |
127663 |
128127 |
- |
PL49 |
Unspecified |
| scaffold1272 |
127958 |
128164 |
- |
PL951 |
Unspecified |