scaffold1278 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1278 |
1 |
287 |
- |
RS3984 |
Unspecified |
| scaffold1278 |
328 |
478 |
- |
RS1362 |
Unspecified |
| scaffold1278 |
775 |
793 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
1694 |
1836 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold1278 |
3581 |
3644 |
- |
PL400 |
Unspecified |
| scaffold1278 |
3961 |
4011 |
+ |
(T)n |
Simple_repeat |
| scaffold1278 |
4013 |
4052 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
5215 |
5294 |
- |
LINE1B_MT |
LINE/L1 |
| scaffold1278 |
6329 |
6381 |
- |
LINE1-5_ZM |
LINE/L1 |
| scaffold1278 |
6759 |
8118 |
- |
L1-1_CPa |
LINE/L1 |
| scaffold1278 |
8657 |
8705 |
+ |
(ATTATAA)n |
Simple_repeat |
| scaffold1278 |
9239 |
9473 |
- |
ATLINE1_2 |
LINE/L1 |
| scaffold1278 |
9687 |
9731 |
- |
ATLINE1_1 |
LINE/L1 |
| scaffold1278 |
11106 |
11146 |
+ |
(TTCAATA)n |
Simple_repeat |
| scaffold1278 |
13043 |
13091 |
+ |
(TTCAATA)n |
Simple_repeat |
| scaffold1278 |
14790 |
14841 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
16138 |
16177 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
16324 |
16564 |
- |
RS4 |
Unspecified |
| scaffold1278 |
17240 |
17331 |
+ |
RS6506 |
Unspecified |
| scaffold1278 |
18809 |
18830 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1278 |
18902 |
18922 |
+ |
(T)n |
Simple_repeat |
| scaffold1278 |
19635 |
19680 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold1278 |
20369 |
20405 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
21088 |
21104 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
21108 |
21144 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold1278 |
21373 |
21452 |
+ |
hAT-9_SBi |
DNA/hAT-Tag1 |
| scaffold1278 |
21906 |
21940 |
+ |
(TCGTGTC)n |
Simple_repeat |
| scaffold1278 |
22108 |
22301 |
- |
RS1095 |
Unspecified |
| scaffold1278 |
22298 |
22560 |
- |
RS356 |
Unspecified |
| scaffold1278 |
22559 |
22668 |
- |
RS1095 |
Unspecified |
| scaffold1278 |
22559 |
22684 |
- |
RS7374 |
Unspecified |
| scaffold1278 |
22888 |
22980 |
+ |
RS6841 |
Unspecified |
| scaffold1278 |
23490 |
23605 |
+ |
RS4 |
Unspecified |
| scaffold1278 |
23492 |
23627 |
+ |
RS84 |
Unspecified |
| scaffold1278 |
23725 |
23761 |
+ |
(TTTATT)n |
Simple_repeat |
| scaffold1278 |
23779 |
23807 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
23997 |
24301 |
- |
PL415 |
Unspecified |
| scaffold1278 |
25057 |
25145 |
- |
RS18358 |
Unspecified |
| scaffold1278 |
25603 |
25633 |
+ |
(TA)n |
Simple_repeat |
| scaffold1278 |
25775 |
26022 |
+ |
RS458 |
Unspecified |
| scaffold1278 |
26419 |
26439 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1278 |
26647 |
26688 |
+ |
(TTTTCG)n |
Simple_repeat |
| scaffold1278 |
26702 |
26797 |
- |
RS15113 |
Unspecified |
| scaffold1278 |
27035 |
27064 |
- |
PL313 |
Unspecified |
| scaffold1278 |
27064 |
27157 |
- |
PL313 |
Unspecified |
| scaffold1278 |
27157 |
27391 |
+ |
RS15131 |
Unspecified |
| scaffold1278 |
27439 |
27476 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1278 |
27564 |
27600 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1278 |
28119 |
28129 |
+ |
(ATG)n |
Simple_repeat |
| scaffold1278 |
28130 |
28203 |
+ |
(GTTATGA)n |
Simple_repeat |
| scaffold1278 |
28391 |
28474 |
+ |
RS1056 |
Unspecified |
| scaffold1278 |
28585 |
28627 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold1278 |
28723 |
28749 |
+ |
(T)n |
Simple_repeat |
| scaffold1278 |
29479 |
29524 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold1278 |
29779 |
29832 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1278 |
30021 |
30269 |
- |
RS356 |
Unspecified |
| scaffold1278 |
30284 |
30349 |
+ |
(T)n |
Simple_repeat |
| scaffold1278 |
30521 |
30547 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1278 |
32655 |
32731 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1278 |
33132 |
33178 |
+ |
(TTTAC)n |
Simple_repeat |
| scaffold1278 |
39731 |
39754 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
40599 |
40749 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1278 |
40802 |
40823 |
+ |
(CTT)n |
Simple_repeat |
| scaffold1278 |
47677 |
47760 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1278 |
49402 |
49558 |
- |
RS3262 |
Unspecified |
| scaffold1278 |
49573 |
49801 |
- |
RS5762 |
Unspecified |
| scaffold1278 |
52925 |
53165 |
- |
RS1492 |
Unspecified |
| scaffold1278 |
53176 |
53207 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold1278 |
53622 |
53648 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1278 |
54144 |
54299 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold1278 |
55539 |
55587 |
+ |
(TGGAA)n |
Simple_repeat |
| scaffold1278 |
55935 |
55996 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1278 |
56040 |
56090 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1278 |
56773 |
56954 |
+ |
RS1009 |
Unspecified |
| scaffold1278 |
57118 |
57160 |
+ |
RS16679 |
Unspecified |
| scaffold1278 |
58585 |
58615 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold1278 |
58904 |
59053 |
- |
RS1261 |
Unspecified |
| scaffold1278 |
58928 |
59053 |
- |
RS3668 |
Unspecified |
| scaffold1278 |
61166 |
61189 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
62615 |
62670 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
63095 |
63138 |
+ |
GA-rich |
Low_complexity |
| scaffold1278 |
67403 |
67453 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
67688 |
67710 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
68140 |
68218 |
+ |
(T)n |
Simple_repeat |
| scaffold1278 |
68376 |
68408 |
+ |
(TTGGGC)n |
Simple_repeat |
| scaffold1278 |
69029 |
69084 |
- |
SINE2-1_STu |
SINE/tRNA |
| scaffold1278 |
72218 |
72461 |
+ |
RS356 |
Unspecified |
| scaffold1278 |
72233 |
72505 |
+ |
RS7374 |
Unspecified |
| scaffold1278 |
72571 |
72981 |
+ |
RS5422 |
Unspecified |
| scaffold1278 |
73062 |
73088 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
73914 |
73940 |
+ |
(A)n |
Simple_repeat |
| scaffold1278 |
74406 |
74477 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1278 |
74495 |
74628 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold1278 |
75380 |
75524 |
- |
RS115 |
Unspecified |
| scaffold1278 |
75504 |
75712 |
+ |
RS3097 |
Unspecified |
| scaffold1278 |
77907 |
78076 |
- |
SINE2-2_STu |
SINE/tRNA |
| scaffold1278 |
79167 |
79249 |
+ |
GA-rich |
Low_complexity |
| scaffold1278 |
79321 |
79446 |
+ |
GA-rich |
Low_complexity |
| scaffold1278 |
81455 |
81476 |
+ |
(CA)n |
Simple_repeat |
| scaffold1278 |
81768 |
81958 |
- |
RS7866 |
Unspecified |
| scaffold1278 |
82559 |
82587 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold1278 |
82800 |
82863 |
+ |
GA-rich |
Low_complexity |
| scaffold1278 |
83003 |
83117 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold1278 |
83907 |
83961 |
+ |
(TAATTTT)n |
Simple_repeat |
| scaffold1278 |
84404 |
84451 |
+ |
(TTTATTA)n |
Simple_repeat |
| scaffold1278 |
84698 |
84758 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1278 |
84777 |
84824 |
+ |
RS135 |
Unspecified |
| scaffold1278 |
84826 |
84999 |
- |
RS1110 |
Unspecified |
| scaffold1278 |
85224 |
85268 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
86069 |
86113 |
+ |
(AATTTG)n |
Simple_repeat |
| scaffold1278 |
86672 |
86809 |
- |
RS423 |
Unspecified |
| scaffold1278 |
86838 |
88829 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold1278 |
89194 |
89248 |
+ |
(ACGAAAC)n |
Simple_repeat |
| scaffold1278 |
89316 |
89779 |
- |
RS1184 |
Unspecified |
| scaffold1278 |
91524 |
92142 |
+ |
RS3148 |
Unspecified |
| scaffold1278 |
92229 |
92275 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1278 |
92713 |
92954 |
- |
RS8720 |
Unspecified |
| scaffold1278 |
92922 |
93105 |
+ |
RS151 |
Unspecified |
| scaffold1278 |
93121 |
93453 |
+ |
RS247 |
Unspecified |
| scaffold1278 |
93121 |
93504 |
+ |
RS247 |
Unspecified |
| scaffold1278 |
94962 |
96173 |
- |
RS122 |
Unspecified |
| scaffold1278 |
95944 |
96391 |
- |
RS227 |
Unspecified |
| scaffold1278 |
96387 |
96647 |
- |
RS227 |
Unspecified |
| scaffold1278 |
96904 |
96951 |
+ |
(CTC)n |
Simple_repeat |
| scaffold1278 |
98098 |
98140 |
+ |
A-rich |
Low_complexity |
| scaffold1278 |
98528 |
98610 |
+ |
RS629 |
Unspecified |
| scaffold1278 |
98732 |
98805 |
+ |
(AACCAC)n |
Simple_repeat |
| scaffold1278 |
99193 |
99279 |
+ |
RS192 |
Unspecified |
| scaffold1278 |
100816 |
100962 |
+ |
RS2190 |
Unspecified |
| scaffold1278 |
101127 |
101149 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1278 |
101169 |
101435 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1278 |
101346 |
101435 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1278 |
101728 |
101778 |
+ |
(AC)n |
Simple_repeat |