scaffold12932 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold12932 |
1 |
25 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
167 |
182 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
183 |
221 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12932 |
222 |
241 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
531 |
552 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
716 |
766 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold12932 |
1074 |
1111 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
1579 |
1628 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
2120 |
2152 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold12932 |
2340 |
2390 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold12932 |
2694 |
2720 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
3168 |
3388 |
- |
RS549 |
Unspecified |
| scaffold12932 |
3389 |
3411 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
3611 |
3628 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
3763 |
3802 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold12932 |
3927 |
3994 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold12932 |
4559 |
4588 |
+ |
(TCGATT)n |
Simple_repeat |
| scaffold12932 |
4728 |
4766 |
+ |
(TGATT)n |
Simple_repeat |
| scaffold12932 |
5382 |
5435 |
+ |
(TTTAAT)n |
Simple_repeat |
| scaffold12932 |
5892 |
5950 |
- |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold12932 |
7327 |
7389 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold12932 |
7692 |
7731 |
+ |
(CAAGTTA)n |
Simple_repeat |
| scaffold12932 |
8368 |
8404 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
8753 |
8763 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold12932 |
8764 |
8797 |
+ |
(TATT)n |
Simple_repeat |
| scaffold12932 |
8798 |
8803 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold12932 |
9018 |
9048 |
+ |
(ATGC)n |
Simple_repeat |
| scaffold12932 |
9707 |
9903 |
+ |
RS565 |
Unspecified |
| scaffold12932 |
9916 |
10003 |
+ |
RS3533 |
Unspecified |
| scaffold12932 |
10287 |
10345 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold12932 |
10411 |
10558 |
- |
RS704 |
Unspecified |
| scaffold12932 |
10558 |
10655 |
+ |
RS3533 |
Unspecified |
| scaffold12932 |
14035 |
14064 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
14331 |
14640 |
- |
RS2379 |
Unspecified |
| scaffold12932 |
15029 |
15071 |
+ |
(TTTCATA)n |
Simple_repeat |
| scaffold12932 |
15188 |
15631 |
+ |
PL782 |
Unspecified |
| scaffold12932 |
15632 |
15697 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold12932 |
16593 |
16639 |
+ |
(TATATAA)n |
Simple_repeat |
| scaffold12932 |
17053 |
17499 |
+ |
PL798 |
Unspecified |
| scaffold12932 |
17276 |
17933 |
- |
RS2517 |
Unspecified |
| scaffold12932 |
17928 |
18037 |
+ |
RS1068 |
Unspecified |
| scaffold12932 |
18025 |
18504 |
- |
RS2517 |
Unspecified |
| scaffold12932 |
18702 |
18812 |
- |
RS328 |
Unspecified |
| scaffold12932 |
18827 |
18863 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
19300 |
19430 |
+ |
(TTGGA)n |
Simple_repeat |
| scaffold12932 |
21407 |
21443 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold12932 |
22807 |
22925 |
- |
RS4475 |
Unspecified |
| scaffold12932 |
22815 |
22919 |
+ |
RS16382 |
Unspecified |
| scaffold12932 |
22879 |
22931 |
- |
RS18111 |
Unspecified |
| scaffold12932 |
23069 |
23373 |
- |
PL54 |
Unspecified |
| scaffold12932 |
23615 |
23676 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
23788 |
23861 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
25669 |
25751 |
- |
RS2017 |
Unspecified |
| scaffold12932 |
26230 |
26379 |
+ |
RS2105 |
Unspecified |
| scaffold12932 |
26582 |
26664 |
- |
RS2017 |
Unspecified |
| scaffold12932 |
27143 |
27604 |
+ |
RS2105 |
Unspecified |
| scaffold12932 |
27605 |
27927 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold12932 |
27928 |
27963 |
+ |
(AAACTTT)n |
Simple_repeat |
| scaffold12932 |
27964 |
28580 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold12932 |
28580 |
28782 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold12932 |
28776 |
32195 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold12932 |
32842 |
33230 |
+ |
RS2105 |
Unspecified |
| scaffold12932 |
34168 |
34230 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold12932 |
34626 |
34671 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold12932 |
35553 |
35594 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold12932 |
35893 |
35948 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold12932 |
36000 |
36038 |
+ |
(TTTTGTA)n |
Simple_repeat |
| scaffold12932 |
36251 |
36286 |
+ |
(AAAAGA)n |
Simple_repeat |
| scaffold12932 |
36361 |
36474 |
- |
RS13232 |
Unspecified |
| scaffold12932 |
36701 |
36720 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
37440 |
37477 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
38359 |
38462 |
+ |
RS4475 |
Unspecified |
| scaffold12932 |
38374 |
38478 |
- |
RS16911 |
Unspecified |
| scaffold12932 |
38593 |
38798 |
+ |
PL169 |
Unspecified |
| scaffold12932 |
38794 |
39357 |
- |
PL268 |
Unspecified |
| scaffold12932 |
39401 |
39488 |
+ |
RS15262 |
Unspecified |
| scaffold12932 |
42150 |
42171 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
44064 |
44098 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
44150 |
44178 |
+ |
(GTTTTGA)n |
Simple_repeat |
| scaffold12932 |
45819 |
45848 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
45930 |
45969 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
47072 |
47131 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
47147 |
47335 |
+ |
RS2545 |
Unspecified |
| scaffold12932 |
47816 |
47868 |
+ |
(ACAACAA)n |
Simple_repeat |
| scaffold12932 |
49038 |
49164 |
+ |
RS1626 |
Unspecified |
| scaffold12932 |
49230 |
49286 |
- |
RS828 |
Unspecified |
| scaffold12932 |
49634 |
49826 |
- |
RS785 |
Unspecified |
| scaffold12932 |
52215 |
52430 |
- |
RS1641 |
Unspecified |
| scaffold12932 |
52590 |
52599 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold12932 |
52600 |
52626 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
52627 |
52642 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold12932 |
53220 |
53586 |
+ |
RS8 |
Unspecified |
| scaffold12932 |
53707 |
53732 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
54260 |
54391 |
- |
RS9351 |
Unspecified |
| scaffold12932 |
54394 |
54472 |
+ |
(ACC)n |
Simple_repeat |
| scaffold12932 |
54889 |
54922 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
54939 |
55499 |
+ |
RS1334 |
Unspecified |
| scaffold12932 |
55501 |
55936 |
- |
RS2600 |
Unspecified |
| scaffold12932 |
57578 |
57675 |
+ |
PL754 |
Unspecified |
| scaffold12932 |
58628 |
58654 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
58805 |
58849 |
- |
PL794 |
Unspecified |
| scaffold12932 |
59177 |
59211 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
60022 |
60202 |
- |
RS2011 |
Unspecified |
| scaffold12932 |
60387 |
60412 |
+ |
(AGA)n |
Simple_repeat |
| scaffold12932 |
60506 |
60538 |
+ |
(TTACT)n |
Simple_repeat |
| scaffold12932 |
60685 |
60803 |
+ |
RS3041 |
Unspecified |
| scaffold12932 |
61016 |
61064 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold12932 |
61366 |
61463 |
+ |
RS4475 |
Unspecified |
| scaffold12932 |
61912 |
62057 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold12932 |
62078 |
62151 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12932 |
62240 |
62344 |
+ |
(ATA)n |
Simple_repeat |
| scaffold12932 |
63365 |
63386 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
63470 |
63499 |
+ |
(ATTCCA)n |
Simple_repeat |
| scaffold12932 |
64204 |
64244 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
64375 |
64410 |
+ |
GA-rich |
Low_complexity |
| scaffold12932 |
69107 |
69453 |
+ |
RS795 |
Unspecified |
| scaffold12932 |
70718 |
70784 |
+ |
(TAACGGT)n |
Simple_repeat |
| scaffold12932 |
70792 |
70819 |
+ |
(AAT)n |
Simple_repeat |
| scaffold12932 |
71391 |
73028 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold12932 |
73447 |
74681 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold12932 |
74866 |
74907 |
+ |
(CCACAG)n |
Simple_repeat |
| scaffold12932 |
74923 |
74990 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold12932 |
75161 |
75794 |
- |
Copia-93_VV-I |
LTR/Copia |
| scaffold12932 |
75857 |
75902 |
+ |
(A)n |
Simple_repeat |
| scaffold12932 |
76083 |
76119 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold12932 |
76242 |
76270 |
+ |
(T)n |
Simple_repeat |
| scaffold12932 |
76352 |
76557 |
- |
RS1257 |
Unspecified |
| scaffold12932 |
76557 |
76659 |
- |
PL793 |
Unspecified |
| scaffold12932 |
77375 |
77419 |
+ |
A-rich |
Low_complexity |
| scaffold12932 |
77610 |
77721 |
+ |
PL517 |
Unspecified |
| scaffold12932 |
78075 |
78121 |
+ |
(ATT)n |
Simple_repeat |
| scaffold12932 |
78743 |
78787 |
+ |
(ACTC)n |
Simple_repeat |
| scaffold12932 |
79562 |
79728 |
+ |
RS13210 |
Unspecified |
| scaffold12932 |
79605 |
79758 |
+ |
RS3117 |
Unspecified |
| scaffold12932 |
81425 |
81459 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold12932 |
86015 |
86201 |
- |
RS908 |
Unspecified |
| scaffold12932 |
86634 |
86685 |
+ |
(GAA)n |
Simple_repeat |
| scaffold12932 |
86978 |
87013 |
+ |
(TCGAA)n |
Simple_repeat |
| scaffold12932 |
87013 |
87279 |
+ |
RS106 |
Unspecified |
| scaffold12932 |
87587 |
87827 |
+ |
RS4 |
Unspecified |
| scaffold12932 |
87923 |
88134 |
+ |
RS1485 |
Unspecified |
| scaffold12932 |
88266 |
88308 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold12932 |
88436 |
88692 |
+ |
RS237 |
Unspecified |
| scaffold12932 |
89126 |
89219 |
+ |
RS2701 |
Unspecified |
| scaffold12932 |
89758 |
89918 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold12932 |
90087 |
90229 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold12932 |
90474 |
90646 |
+ |
RS17566 |
Unspecified |
| scaffold12932 |
91233 |
91421 |
+ |
RS14322 |
Unspecified |
| scaffold12932 |
91281 |
91578 |
+ |
RS16505 |
Unspecified |
| scaffold12932 |
91639 |
91915 |
- |
PL352 |
Unspecified |
| scaffold12932 |
91909 |
92081 |
+ |
RS17566 |
Unspecified |
| scaffold12932 |
92668 |
92856 |
+ |
RS14322 |
Unspecified |
| scaffold12932 |
92716 |
93013 |
+ |
RS16505 |
Unspecified |
| scaffold12932 |
93074 |
93528 |
- |
PL352 |
Unspecified |
| scaffold12932 |
93889 |
94218 |
- |
PL789 |
Unspecified |
| scaffold12932 |
94545 |
94578 |
+ |
(TTTTCG)n |
Simple_repeat |