scaffold12942 Repeat List
genome start end strand repeat-name repeat-class
scaffold12942 1 22 + (A)n Simple_repeat
scaffold12942 1460 1477 + (T)n Simple_repeat
scaffold12942 1696 1737 + (CTATTTT)n Simple_repeat
scaffold12942 2039 2143 - RS4475 Unspecified
scaffold12942 2263 2332 + (ATATTA)n Simple_repeat
scaffold12942 2799 2860 + RS84 Unspecified
scaffold12942 2886 2937 + (ATA)n Simple_repeat
scaffold12942 4385 4563 + RS1874 Unspecified
scaffold12942 4703 4727 + (T)n Simple_repeat
scaffold12942 5255 5416 - RS503 Unspecified
scaffold12942 5424 5464 + (AATA)n Simple_repeat
scaffold12942 5600 5643 + (TTATT)n Simple_repeat
scaffold12942 6017 6092 - COPIA-I_MT LTR/Copia
scaffold12942 6077 6431 - RS5886 Unspecified
scaffold12942 6448 7151 - RS11807 Unspecified
scaffold12942 7194 7406 - RS2572 Unspecified
scaffold12942 7417 7459 + (TAAT)n Simple_repeat
scaffold12942 7592 7624 + (TAAT)n Simple_repeat
scaffold12942 7768 7895 + (CAGTT)n Simple_repeat
scaffold12942 7898 7957 + (TTCAG)n Simple_repeat
scaffold12942 8120 8214 + (TTCAG)n Simple_repeat
scaffold12942 8356 8393 + (TTATAT)n Simple_repeat
scaffold12942 8538 8592 - RS10543 Unspecified
scaffold12942 9042 9154 - RS7959 Unspecified
scaffold12942 9745 9882 + A-rich Low_complexity
scaffold12942 9924 9942 + (ATC)n Simple_repeat
scaffold12942 10522 10541 + (T)n Simple_repeat
scaffold12942 10764 10824 - RS15470 Unspecified
scaffold12942 10989 11030 + RS622 Unspecified
scaffold12942 11016 11082 + RS54 Unspecified
scaffold12942 12079 12314 - RS9581 Unspecified
scaffold12942 12503 12650 - RS12141 Unspecified
scaffold12942 15065 15138 + A-rich Low_complexity
scaffold12942 15173 15221 + (CCA)n Simple_repeat
scaffold12942 15594 15690 + RS4475 Unspecified
scaffold12942 15918 16024 - RS750 Unspecified
scaffold12942 18405 18552 + RS115 Unspecified
scaffold12942 18908 18957 + RS5667 Unspecified
scaffold12942 18915 19007 - RS38 Unspecified
scaffold12942 18996 19108 - RS4475 Unspecified
scaffold12942 19100 19194 - RS15316 Unspecified
scaffold12942 19103 19181 - RS38 Unspecified
scaffold12942 19277 19323 + (TA)n Simple_repeat
scaffold12942 21126 21174 + A-rich Low_complexity
scaffold12942 21243 21267 + (ATTAA)n Simple_repeat
scaffold12942 22236 22281 + (AT)n Simple_repeat
scaffold12942 26448 26498 + (AAAAT)n Simple_repeat
scaffold12942 27120 27164 + (TTTAA)n Simple_repeat
scaffold12942 28010 28065 + A-rich Low_complexity
scaffold12942 28532 28557 + (GAC)n Simple_repeat
scaffold12942 28577 28623 + (TGT)n Simple_repeat
scaffold12942 29024 29091 + A-rich Low_complexity
scaffold12942 29361 29389 + (TGC)n Simple_repeat
scaffold12942 29391 29447 + (TGTTGC)n Simple_repeat
scaffold12942 29488 29522 + (TGT)n Simple_repeat
scaffold12942 30781 30832 + (TT)n Simple_repeat
scaffold12942 30836 30861 + (ATAA)n Simple_repeat
scaffold12942 31332 31365 + (TTATTT)n Simple_repeat
scaffold12942 31990 32031 + RS16604 Unspecified
scaffold12942 32486 32578 - RS4475 Unspecified
scaffold12942 34539 34566 + (A)n Simple_repeat
scaffold12942 34948 34979 + (A)n Simple_repeat
scaffold12942 35349 35500 + RS1082 Unspecified
scaffold12942 38450 38642 - RS17759 Unspecified
scaffold12942 38798 38936 - RS6035 Unspecified
scaffold12942 40804 40939 + RS441 Unspecified
scaffold12942 41405 41477 + RS4209 Unspecified
scaffold12942 41799 41945 - RS742 Unspecified
scaffold12942 42012 42035 + (A)n Simple_repeat
scaffold12942 42576 42763 + (CAGTT)n Simple_repeat
scaffold12942 42576 42728 + (CAGTT)n Simple_repeat
scaffold12942 42715 42763 - RS14977 Unspecified
scaffold12942 43201 43226 + (TTC)n Simple_repeat
scaffold12942 45402 45434 + (CAAC)n Simple_repeat
scaffold12942 46629 46657 + A-rich Low_complexity
scaffold12942 46892 46996 - RS4475 Unspecified
scaffold12942 47329 47534 - RS13881 Unspecified
scaffold12942 47634 47780 + (TTTA)n Simple_repeat
scaffold12942 47634 47672 + (TTTA)n Simple_repeat
scaffold12942 47658 47780 - RS13648 Unspecified
scaffold12942 47857 47898 + (AATATT)n Simple_repeat
scaffold12942 48204 49168 - RS13172 Unspecified
scaffold12942 50101 50306 - RS13881 Unspecified
scaffold12942 50413 50535 - RS13648 Unspecified
scaffold12942 50635 50674 + (TATAA)n Simple_repeat
scaffold12942 51000 51965 - RS13172 Unspecified
scaffold12942 52358 52376 + (A)n Simple_repeat
scaffold12942 53986 54015 + (T)n Simple_repeat
scaffold12942 54247 54268 + (A)n Simple_repeat
scaffold12942 54741 54929 + RS2697 Unspecified
scaffold12942 54936 54972 + A-rich Low_complexity
scaffold12942 55250 55355 - RS16382 Unspecified
scaffold12942 58065 58285 + (A)n Simple_repeat
scaffold12942 58259 58285 + (A)n Simple_repeat
scaffold12942 58809 58863 + A-rich Low_complexity
scaffold12942 61144 61197 - RS972 Unspecified
scaffold12942 63347 63380 + (T)n Simple_repeat
scaffold12942 64258 64274 + (T)n Simple_repeat
scaffold12942 68549 68581 + (TAAAAT)n Simple_repeat
scaffold12942 68763 68790 + (A)n Simple_repeat
scaffold12942 72433 72461 + (AGC)n Simple_repeat
scaffold12942 72852 72912 - CACTA_LP DNA/CMC-EnSpm
scaffold12942 77726 77769 + ATCopia24I LTR/Copia
scaffold12942 77732 77770 + Gypsy-80-I_ZM LTR/Gypsy
scaffold12942 77771 77794 + MuDR-10_GM DNA/MULE-MuDR
scaffold12942 77962 78095 + (CGG)n Simple_repeat
scaffold12942 78384 78411 + (AATTTT)n Simple_repeat
scaffold12942 78504 78530 + (T)n Simple_repeat
scaffold12942 78559 78587 + A-rich Low_complexity
scaffold12942 78657 78690 + (TTTTACT)n Simple_repeat
scaffold12942 78819 79088 - RS1856 Unspecified
scaffold12942 79448 79567 + (TAA)n Simple_repeat
scaffold12942 79765 79815 + (T)n Simple_repeat
scaffold12942 80119 80156 + (TTTTTG)n Simple_repeat
scaffold12942 80141 80188 + (TGTTAA)n Simple_repeat
scaffold12942 80375 80542 + RS492 Unspecified
scaffold12942 81089 81410 + RS10846 Unspecified
scaffold12942 81453 81588 + RS8090 Unspecified
scaffold12942 82619 82770 + RS16566 Unspecified
scaffold12942 82810 82874 + RS6556 Unspecified
scaffold12942 85027 85060 + RS358 Unspecified
scaffold12942 85911 86000 + RS4475 Unspecified
scaffold12942 85913 86012 + RS10491 Unspecified
scaffold12942 86201 86251 + A-rich Low_complexity
scaffold12942 86373 86848 - RS458 Unspecified
scaffold12942 86838 86955 - RS458 Unspecified
scaffold12942 86913 87027 + (A)n Simple_repeat
scaffold12942 86989 87027 + (A)n Simple_repeat
scaffold12942 87250 87283 + RS358 Unspecified
scaffold12942 88133 88157 + (TTAT)n Simple_repeat
scaffold12942 88753 88896 + RS115 Unspecified
scaffold12942 89044 89096 + (T)n Simple_repeat
scaffold12942 89321 89346 + (AAATA)n Simple_repeat
scaffold12942 89899 90055 + (TTA)n Simple_repeat
scaffold12942 90289 90309 + (CAA)n Simple_repeat
scaffold12942 90641 90679 + (AGCTG)n Simple_repeat
scaffold12942 90922 91010 + (TGAAC)n Simple_repeat
scaffold12942 91365 91478 + RS17262 Unspecified
scaffold12942 91370 91469 - RS4475 Unspecified
scaffold12942 94109 94168 + RS38 Unspecified
scaffold12942 95855 95887 + (GACAA)n Simple_repeat
scaffold12942 97702 97724 + (TTAA)n Simple_repeat
scaffold12942 97807 97996 + RS18 Unspecified
scaffold12942 98161 98194 + GA-rich Low_complexity
scaffold12942 98415 98610 + RS18 Unspecified
scaffold12942 98854 98872 + (T)n Simple_repeat
scaffold12942 98900 98921 + (A)n Simple_repeat
scaffold12942 99461 99488 + (TGAAG)n Simple_repeat
scaffold12942 99621 99817 - PL517 Unspecified
scaffold12942 99856 99891 + (ATTTA)n Simple_repeat
scaffold12942 99976 100076 + RS16122 Unspecified
scaffold12942 101861 101922 + RS14987 Unspecified
scaffold12942 101862 101911 - RS4 Unspecified
scaffold12942 104677 104693 + (A)n Simple_repeat
scaffold12942 104755 104799 + (TTGTAA)n Simple_repeat
scaffold12942 105478 105495 + (A)n Simple_repeat
scaffold12942 105613 105725 + RS13856 Unspecified
scaffold12942 107834 107946 + RS13856 Unspecified
scaffold12942 111415 111444 + (T)n Simple_repeat
scaffold12942 111741 111746 + (TTTAATT)n Simple_repeat
scaffold12942 111747 111776 + (T)n Simple_repeat
scaffold12942 112416 112527 - RS620 Unspecified
scaffold12942 117907 117960 + RS17722 Unspecified
scaffold12942 119592 119623 + (ATATT)n Simple_repeat
scaffold12942 119652 120027 - RS776 Unspecified
scaffold12942 120115 120218 + A-rich Low_complexity
scaffold12942 120182 120218 + A-rich Low_complexity
scaffold12942 120249 120340 + tRNASAT-1_ZM Satellite
scaffold12942 120358 120375 + (T)n Simple_repeat
scaffold12942 122010 122407 - RS1720 Unspecified
scaffold12942 123221 123475 + RS12188 Unspecified
scaffold12942 123491 123685 + RS10611 Unspecified
scaffold12942 123686 123912 + RS5280 Unspecified
scaffold12942 124579 124658 - RS14280 Unspecified
scaffold12942 124657 124716 - RS14138 Unspecified
scaffold12942 124966 125226 + RS8902 Unspecified
scaffold12942 125939 125995 + (AACTA)n Simple_repeat
scaffold12942 125993 126041 + (AAC)n Simple_repeat
scaffold12942 126382 126456 - ENSPM3_ZM DNA/CMC-EnSpm
scaffold12942 126764 126837 + A-rich Low_complexity
scaffold12942 127016 127039 + (A)n Simple_repeat
scaffold12942 127112 127182 + A-rich Low_complexity
scaffold12942 127301 127454 + hAT-N16_ZM DNA/hAT-Ac
scaffold12942 127615 127698 + (CGAGCT)n Simple_repeat
scaffold12942 127794 127921 + hAT-N16_ZM DNA/hAT-Ac
scaffold12942 128269 128341 + Copia-3_PTri-I LTR/Copia
scaffold12942 128342 128378 + Copia-3_PTri-I LTR/Copia
scaffold12942 133382 133411 + (GAACT)n Simple_repeat
scaffold12942 135910 135937 + (GGT)n Simple_repeat
scaffold12942 137554 137602 - RS285 Unspecified
scaffold12942 137758 137943 - RS38 Unspecified
scaffold12942 140214 140276 + A-rich Low_complexity
scaffold12942 140665 140725 + (CAC)n Simple_repeat
scaffold12942 140725 140755 + (ATT)n Simple_repeat
scaffold12942 140809 140830 + (ACC)n Simple_repeat
scaffold12942 140831 140842 + (CTACCA)n Simple_repeat
scaffold12942 141021 141057 + (CGCCAC)n Simple_repeat
scaffold12942 141427 141509 + (AGCGGC)n Simple_repeat
scaffold12942 141796 141825 + (T)n Simple_repeat
scaffold12942 141839 141868 + (AAT)n Simple_repeat
scaffold12942 145542 145575 + A-rich Low_complexity
scaffold12942 145894 145993 - RS16836 Unspecified
scaffold12942 150371 150510 - RS84 Unspecified
scaffold12942 150614 150658 + A-rich Low_complexity
scaffold12942 150660 150681 + (T)n Simple_repeat
scaffold12942 151235 151362 - PL759 Unspecified
scaffold12942 151259 151376 + RS9085 Unspecified
scaffold12942 152078 152180 + Copia-3_PTri-I LTR/Copia
scaffold12942 152533 152720 + (TCGGG)n Simple_repeat
scaffold12942 153392 153494 + Copia-3_PTri-I LTR/Copia
scaffold12942 153648 153671 + (T)n Simple_repeat
scaffold12942 153822 153850 + (T)n Simple_repeat
scaffold12942 153980 154019 + (AATTATT)n Simple_repeat
scaffold12942 155161 155216 + (TAACCA)n Simple_repeat
scaffold12942 156876 156931 + (TTGAT)n Simple_repeat
scaffold12942 157132 157165 + (TATTT)n Simple_repeat
scaffold12942 157231 157254 + (AAAT)n Simple_repeat
scaffold12942 157335 157385 + RS5667 Unspecified
scaffold12942 157341 157389 + RS1874 Unspecified
scaffold12942 157370 157416 + RS15316 Unspecified
scaffold12942 157379 157563 + RS1874 Unspecified
scaffold12942 157596 157647 + (T)n Simple_repeat
scaffold12942 157688 157932 - RS4 Unspecified
scaffold12942 161350 161395 + (TTTGAA)n Simple_repeat
scaffold12942 163937 164012 - RS14189 Unspecified
scaffold12942 164608 164655 + A-rich Low_complexity
scaffold12942 165288 165381 + RS4475 Unspecified
scaffold12942 165621 165857 + RS18 Unspecified
scaffold12942 174889 174918 + (TTTTA)n Simple_repeat
scaffold12942 175840 175899 + A-rich Low_complexity
scaffold12942 182699 182723 + (AC)n Simple_repeat
scaffold12942 183448 183721 - RS586 Unspecified
scaffold12942 184720 184747 + A-rich Low_complexity
scaffold12942 185157 185340 + RS178 Unspecified
scaffold12942 185727 185808 + A-rich Low_complexity
scaffold12942 185913 186005 + ATRAN DNA?
scaffold12942 186071 186101 + (AACAG)n Simple_repeat
scaffold12942 186376 186412 + (ATATTA)n Simple_repeat
scaffold12942 187032 187210 + RS5 Unspecified
scaffold12942 187517 187611 + RS16382 Unspecified
scaffold12942 188266 188483 + RS1062 Unspecified
scaffold12942 188384 188531 - RS620 Unspecified
scaffold12942 189463 189479 + (A)n Simple_repeat
scaffold12942 189719 189900 + (AGCTG)n Simple_repeat
scaffold12942 198275 198297 + (A)n Simple_repeat
scaffold12942 198849 198876 + (T)n Simple_repeat
scaffold12942 199240 199296 + (CAGTT)n Simple_repeat
scaffold12942 199442 199875 + PL580 Unspecified
scaffold12942 199457 199824 + RS5402 Unspecified
scaffold12942 199904 199953 + (T)n Simple_repeat
scaffold12942 199933 199977 + A-rich Low_complexity
scaffold12942 200112 200144 + GA-rich Low_complexity
scaffold12942 200169 200222 + PL601 Unspecified
scaffold12942 200220 200324 + RS84 Unspecified
scaffold12942 200577 200675 - PL436 Unspecified
scaffold12942 200588 200682 - RS16382 Unspecified
scaffold12942 201217 201310 + (A)n Simple_repeat
scaffold12942 201996 202019 + (T)n Simple_repeat
scaffold12942 204768 204787 + (GAC)n Simple_repeat
scaffold12942 204958 205003 + A-rich Low_complexity
scaffold12942 205155 205294 - PL517 Unspecified
scaffold12942 205180 205316 - PL517 Unspecified
scaffold12942 205428 205534 + RS16382 Unspecified
scaffold12942 205960 206137 - RS10237 Unspecified
scaffold12942 206344 206721 - RS13619 Unspecified
scaffold12942 206886 206911 + (TTATT)n Simple_repeat
scaffold12942 207074 207507 - RS12362 Unspecified
scaffold12942 207545 207720 + RS13813 Unspecified
scaffold12942 208088 208169 + (TG)n Simple_repeat
scaffold12942 208723 208750 + (T)n Simple_repeat
scaffold12942 209366 209551 + RS10465 Unspecified
scaffold12942 210219 210635 + RS6795 Unspecified
scaffold12942 210779 210810 + (TGATGT)n Simple_repeat
scaffold12942 210920 210954 + (TGG)n Simple_repeat
scaffold12942 210955 210961 + (TGTTGG)n Simple_repeat
scaffold12942 211257 211475 + RS6399 Unspecified
scaffold12942 214667 214693 + (A)n Simple_repeat
scaffold12942 215856 215873 + (A)n Simple_repeat
scaffold12942 217834 217872 + A-rich Low_complexity
scaffold12942 217928 217946 + (CGA)n Simple_repeat
scaffold12942 221647 221683 + Copia-87_ST-I LTR/Copia
scaffold12942 222782 222799 + (TA)n Simple_repeat
scaffold12942 222919 223000 + RS1236 Unspecified
scaffold12942 223002 223096 + PL903 Unspecified
scaffold12942 224169 224353 + RS7386 Unspecified
scaffold12942 224390 224412 + (T)n Simple_repeat
scaffold12942 224442 224544 + COPMET_LTR LTR/Copia