scaffold13006 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold13006 |
4 |
326 |
- |
RS14780 |
Unspecified |
| scaffold13006 |
327 |
576 |
- |
RS1555 |
Unspecified |
| scaffold13006 |
611 |
661 |
+ |
(TACAACA)n |
Simple_repeat |
| scaffold13006 |
806 |
1008 |
+ |
(CAA)n |
Simple_repeat |
| scaffold13006 |
1567 |
1617 |
+ |
(TTAGAA)n |
Simple_repeat |
| scaffold13006 |
1911 |
1969 |
+ |
(AATTAG)n |
Simple_repeat |
| scaffold13006 |
2055 |
2079 |
+ |
(T)n |
Simple_repeat |
| scaffold13006 |
2514 |
2563 |
+ |
(AATTAG)n |
Simple_repeat |
| scaffold13006 |
4539 |
4566 |
+ |
(TA)n |
Simple_repeat |
| scaffold13006 |
4836 |
4897 |
+ |
(TCT)n |
Simple_repeat |
| scaffold13006 |
5410 |
5469 |
+ |
(ATTTTAT)n |
Simple_repeat |
| scaffold13006 |
6138 |
6351 |
+ |
RS2356 |
Unspecified |
| scaffold13006 |
6283 |
6767 |
- |
RS6824 |
Unspecified |
| scaffold13006 |
6405 |
6976 |
+ |
RS2356 |
Unspecified |
| scaffold13006 |
6806 |
7062 |
- |
RS899 |
Unspecified |
| scaffold13006 |
7102 |
7447 |
+ |
RS2399 |
Unspecified |
| scaffold13006 |
7864 |
7900 |
+ |
GA-rich |
Low_complexity |
| scaffold13006 |
7948 |
8006 |
+ |
(GTTTTTT)n |
Simple_repeat |
| scaffold13006 |
8009 |
8036 |
+ |
(T)n |
Simple_repeat |
| scaffold13006 |
10253 |
10572 |
+ |
PL734 |
Unspecified |
| scaffold13006 |
10291 |
10462 |
- |
RS1746 |
Unspecified |
| scaffold13006 |
10526 |
10700 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
10710 |
10883 |
+ |
L1-15_GM |
LINE/L1 |
| scaffold13006 |
11815 |
12006 |
+ |
RS7696 |
Unspecified |
| scaffold13006 |
12197 |
13112 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
14281 |
15120 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold13006 |
14545 |
14825 |
- |
L1-4_SBi |
LINE/L1 |
| scaffold13006 |
15080 |
15295 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold13006 |
15155 |
15225 |
- |
LINE1-30_ZM |
LINE/L1 |
| scaffold13006 |
15478 |
15532 |
- |
LINE1-35_ZM |
LINE/L1 |
| scaffold13006 |
16494 |
16532 |
+ |
(AACTCAA)n |
Simple_repeat |
| scaffold13006 |
18497 |
19065 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
19258 |
19440 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
19442 |
19997 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
20614 |
20872 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
21132 |
21803 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold13006 |
22527 |
22559 |
+ |
(GTG)n |
Simple_repeat |
| scaffold13006 |
22949 |
23013 |
+ |
A-rich |
Low_complexity |
| scaffold13006 |
23239 |
23279 |
+ |
(CT)n |
Simple_repeat |
| scaffold13006 |
23295 |
23677 |
+ |
RS9492 |
Unspecified |
| scaffold13006 |
24587 |
24713 |
+ |
A-rich |
Low_complexity |
| scaffold13006 |
24729 |
24790 |
+ |
PL103 |
Unspecified |
| scaffold13006 |
26324 |
26395 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold13006 |
30116 |
30200 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold13006 |
30310 |
30336 |
+ |
(AC)n |
Simple_repeat |
| scaffold13006 |
31444 |
31465 |
+ |
(A)n |
Simple_repeat |
| scaffold13006 |
31705 |
31773 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold13006 |
31933 |
31974 |
- |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold13006 |
32980 |
33616 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold13006 |
33724 |
34117 |
+ |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold13006 |
34402 |
35404 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold13006 |
35755 |
35795 |
+ |
A-rich |
Low_complexity |
| scaffold13006 |
35871 |
35912 |
+ |
A-rich |
Low_complexity |
| scaffold13006 |
40757 |
40776 |
+ |
(A)n |
Simple_repeat |
| scaffold13006 |
40813 |
40955 |
- |
RS266 |
Unspecified |
| scaffold13006 |
41180 |
41776 |
- |
RS1059 |
Unspecified |