scaffold13786 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold13786 |
1 |
200 |
- |
RS1172 |
Unspecified |
| scaffold13786 |
201 |
315 |
- |
RS1172 |
Unspecified |
| scaffold13786 |
201 |
330 |
+ |
RS217 |
Unspecified |
| scaffold13786 |
359 |
448 |
- |
RS3121 |
Unspecified |
| scaffold13786 |
473 |
499 |
+ |
(AT)n |
Simple_repeat |
| scaffold13786 |
555 |
596 |
+ |
(TATC)n |
Simple_repeat |
| scaffold13786 |
1069 |
1167 |
- |
L1-24_CPa |
LINE/L1 |
| scaffold13786 |
1204 |
1562 |
+ |
RS12396 |
Unspecified |
| scaffold13786 |
2186 |
2224 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold13786 |
2186 |
2388 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold13786 |
2206 |
2388 |
+ |
RS6264 |
Unspecified |
| scaffold13786 |
2531 |
2835 |
+ |
RS11719 |
Unspecified |
| scaffold13786 |
3265 |
3383 |
+ |
RS14547 |
Unspecified |
| scaffold13786 |
4062 |
4624 |
+ |
RS2712 |
Unspecified |
| scaffold13786 |
4682 |
4972 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold13786 |
5021 |
5410 |
+ |
RS550 |
Unspecified |
| scaffold13786 |
5412 |
5559 |
+ |
RS7428 |
Unspecified |
| scaffold13786 |
6154 |
6192 |
+ |
(TATTTGA)n |
Simple_repeat |
| scaffold13786 |
6310 |
6329 |
+ |
(GT)n |
Simple_repeat |
| scaffold13786 |
6341 |
6380 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold13786 |
7411 |
7602 |
- |
RS134 |
Unspecified |
| scaffold13786 |
7691 |
7727 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
7872 |
8036 |
- |
RS26 |
Unspecified |
| scaffold13786 |
10044 |
10202 |
- |
RS3094 |
Unspecified |
| scaffold13786 |
10134 |
10345 |
- |
RS3094 |
Unspecified |
| scaffold13786 |
10975 |
11019 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold13786 |
11617 |
11648 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
11836 |
11932 |
+ |
RS18358 |
Unspecified |
| scaffold13786 |
12006 |
12260 |
+ |
PL727 |
Unspecified |
| scaffold13786 |
12349 |
12396 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold13786 |
13296 |
13472 |
+ |
RS683 |
Unspecified |
| scaffold13786 |
13427 |
13586 |
+ |
RS997 |
Unspecified |
| scaffold13786 |
13455 |
13586 |
+ |
RS415 |
Unspecified |
| scaffold13786 |
14222 |
14265 |
+ |
(ATTACA)n |
Simple_repeat |
| scaffold13786 |
14251 |
14277 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold13786 |
14277 |
14316 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13786 |
17136 |
17204 |
- |
PL169 |
Unspecified |
| scaffold13786 |
17235 |
17273 |
+ |
(TA)n |
Simple_repeat |
| scaffold13786 |
17991 |
18008 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
18341 |
18399 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold13786 |
19572 |
19644 |
- |
PL169 |
Unspecified |
| scaffold13786 |
19900 |
19921 |
+ |
(TA)n |
Simple_repeat |
| scaffold13786 |
21856 |
22014 |
- |
RS3094 |
Unspecified |
| scaffold13786 |
21946 |
22157 |
- |
RS3094 |
Unspecified |
| scaffold13786 |
22795 |
22817 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13786 |
22818 |
22851 |
+ |
(AAT)n |
Simple_repeat |
| scaffold13786 |
22852 |
22871 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13786 |
25228 |
25246 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
28977 |
29047 |
+ |
RS12030 |
Unspecified |
| scaffold13786 |
29262 |
29428 |
+ |
RS581 |
Unspecified |
| scaffold13786 |
29426 |
30433 |
+ |
PL678 |
Unspecified |
| scaffold13786 |
30422 |
30464 |
- |
RS1172 |
Unspecified |
| scaffold13786 |
30896 |
30918 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
31683 |
31747 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
32203 |
32317 |
+ |
RS509 |
Unspecified |
| scaffold13786 |
32317 |
32357 |
+ |
RS729 |
Unspecified |
| scaffold13786 |
32490 |
32518 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
32553 |
32694 |
+ |
RS600 |
Unspecified |
| scaffold13786 |
32928 |
33044 |
- |
RS729 |
Unspecified |
| scaffold13786 |
33038 |
33131 |
+ |
RS509 |
Unspecified |
| scaffold13786 |
33237 |
33280 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
33449 |
33472 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
33551 |
33605 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
38424 |
38448 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
38639 |
38754 |
+ |
RS525 |
Unspecified |
| scaffold13786 |
38963 |
39023 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
39021 |
39116 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold13786 |
39223 |
39273 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
39525 |
39585 |
+ |
(ATTTAAG)n |
Simple_repeat |
| scaffold13786 |
39753 |
40034 |
+ |
RS10417 |
Unspecified |
| scaffold13786 |
40140 |
40281 |
+ |
RS10851 |
Unspecified |
| scaffold13786 |
40179 |
40545 |
+ |
RS5532 |
Unspecified |
| scaffold13786 |
41076 |
41218 |
- |
RS10004 |
Unspecified |
| scaffold13786 |
41701 |
41841 |
- |
RS14210 |
Unspecified |
| scaffold13786 |
41764 |
41915 |
- |
RS10714 |
Unspecified |
| scaffold13786 |
42303 |
42647 |
- |
RS12660 |
Unspecified |
| scaffold13786 |
42610 |
42935 |
- |
RS590 |
Unspecified |
| scaffold13786 |
43201 |
43245 |
+ |
MuDR1_ZM |
DNA/MULE-MuDR |
| scaffold13786 |
43210 |
43250 |
- |
Gypsy12-I_VC |
LTR/Gypsy |
| scaffold13786 |
44214 |
44232 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
45129 |
45160 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
45940 |
45970 |
+ |
(CATT)n |
Simple_repeat |
| scaffold13786 |
46891 |
46933 |
+ |
(TATG)n |
Simple_repeat |
| scaffold13786 |
48571 |
48705 |
- |
EnSpm-5_VV |
DNA/En-Spm |
| scaffold13786 |
48786 |
49054 |
- |
EnSpm-5_VV |
DNA/En-Spm |
| scaffold13786 |
49346 |
49575 |
- |
EnSpm-5_VV |
DNA/En-Spm |
| scaffold13786 |
50038 |
50093 |
- |
PL477 |
Unspecified |
| scaffold13786 |
50044 |
50225 |
- |
RS79 |
Unspecified |
| scaffold13786 |
50172 |
50237 |
+ |
RS18012 |
Unspecified |
| scaffold13786 |
50614 |
50692 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold13786 |
50802 |
50839 |
+ |
(TC)n |
Simple_repeat |
| scaffold13786 |
51006 |
51384 |
+ |
RS1442 |
Unspecified |
| scaffold13786 |
51866 |
51935 |
+ |
(TTATGAA)n |
Simple_repeat |
| scaffold13786 |
58556 |
58594 |
+ |
(TTGTTT)n |
Simple_repeat |
| scaffold13786 |
60808 |
60893 |
+ |
(TGATTTT)n |
Simple_repeat |
| scaffold13786 |
62930 |
64713 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13786 |
64681 |
66120 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold13786 |
69843 |
69937 |
- |
RS17820 |
Unspecified |
| scaffold13786 |
69870 |
70030 |
- |
RS3317 |
Unspecified |
| scaffold13786 |
70142 |
70197 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
70142 |
70221 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
70190 |
70221 |
- |
RS7791 |
Unspecified |
| scaffold13786 |
70744 |
70861 |
- |
RS6636 |
Unspecified |
| scaffold13786 |
70937 |
71186 |
- |
RS6034 |
Unspecified |
| scaffold13786 |
71471 |
71501 |
+ |
(GATAT)n |
Simple_repeat |
| scaffold13786 |
72028 |
72199 |
- |
RS14090 |
Unspecified |
| scaffold13786 |
72284 |
72850 |
- |
RS10416 |
Unspecified |
| scaffold13786 |
73008 |
73439 |
- |
RS10883 |
Unspecified |
| scaffold13786 |
73198 |
73500 |
+ |
(TTTTTCT)n |
Simple_repeat |
| scaffold13786 |
73453 |
73500 |
+ |
(TTTTTCT)n |
Simple_repeat |
| scaffold13786 |
73833 |
73963 |
- |
RS7602 |
Unspecified |
| scaffold13786 |
75010 |
75160 |
- |
RS7868 |
Unspecified |
| scaffold13786 |
75308 |
75519 |
- |
RS3678 |
Unspecified |
| scaffold13786 |
75662 |
75698 |
+ |
(ATTGGA)n |
Simple_repeat |
| scaffold13786 |
75993 |
76053 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold13786 |
76295 |
76763 |
+ |
Helitron5 |
RC/Helitron |
| scaffold13786 |
76863 |
77003 |
- |
RS7791 |
Unspecified |
| scaffold13786 |
77106 |
77493 |
- |
RS4378 |
Unspecified |
| scaffold13786 |
77278 |
77634 |
+ |
RS8237 |
Unspecified |
| scaffold13786 |
77861 |
77910 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
78159 |
78235 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
78418 |
78516 |
+ |
RS3962 |
Unspecified |
| scaffold13786 |
78552 |
78615 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold13786 |
78681 |
78709 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
79144 |
79178 |
+ |
(AAGTAG)n |
Simple_repeat |
| scaffold13786 |
79446 |
79492 |
- |
RS1172 |
Unspecified |
| scaffold13786 |
81265 |
81284 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13786 |
81740 |
81820 |
+ |
RS972 |
Unspecified |
| scaffold13786 |
82436 |
82481 |
+ |
(ATT)n |
Simple_repeat |
| scaffold13786 |
82482 |
82524 |
+ |
(TAGTTG)n |
Simple_repeat |
| scaffold13786 |
83884 |
83953 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold13786 |
83978 |
84056 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold13786 |
84087 |
84228 |
+ |
RS17860 |
Unspecified |
| scaffold13786 |
84401 |
84427 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
85016 |
85064 |
+ |
(TTTGA)n |
Simple_repeat |
| scaffold13786 |
85134 |
85227 |
- |
RS4475 |
Unspecified |
| scaffold13786 |
85756 |
85811 |
+ |
(TACTTGT)n |
Simple_repeat |
| scaffold13786 |
86351 |
86374 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
86913 |
86958 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold13786 |
87037 |
87095 |
+ |
(TGATTTG)n |
Simple_repeat |
| scaffold13786 |
91187 |
91206 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
92719 |
93219 |
+ |
hAT-N16_ZM |
DNA/hAT-Ac |
| scaffold13786 |
93643 |
93667 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
94085 |
94109 |
+ |
(TGAACT)n |
Simple_repeat |
| scaffold13786 |
96396 |
96419 |
+ |
(CGT)n |
Simple_repeat |
| scaffold13786 |
96957 |
97004 |
- |
RS16836 |
Unspecified |
| scaffold13786 |
96964 |
97002 |
- |
RS12449 |
Unspecified |
| scaffold13786 |
96994 |
97569 |
- |
PL301 |
Unspecified |
| scaffold13786 |
97593 |
97628 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
99113 |
99148 |
+ |
(CTCTT)n |
Simple_repeat |
| scaffold13786 |
99332 |
101077 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold13786 |
99983 |
100099 |
+ |
MuDR-3_SBi |
DNA/MULE-MuDR |
| scaffold13786 |
102265 |
102289 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
102438 |
102473 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
102826 |
102857 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold13786 |
103246 |
103273 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
104213 |
104236 |
+ |
(A)n |
Simple_repeat |
| scaffold13786 |
105527 |
105587 |
+ |
(ACA)n |
Simple_repeat |
| scaffold13786 |
105739 |
105800 |
+ |
(AACAC)n |
Simple_repeat |
| scaffold13786 |
106111 |
106141 |
+ |
(GCGGCG)n |
Simple_repeat |
| scaffold13786 |
106444 |
106667 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold13786 |
107158 |
107203 |
+ |
RS133 |
Unspecified |
| scaffold13786 |
107943 |
107987 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold13786 |
108180 |
108323 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold13786 |
108371 |
108659 |
+ |
RS310 |
Unspecified |
| scaffold13786 |
108863 |
108912 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
109325 |
109405 |
+ |
A-rich |
Low_complexity |
| scaffold13786 |
109795 |
109976 |
+ |
RS79 |
Unspecified |
| scaffold13786 |
110469 |
110502 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold13786 |
110617 |
110657 |
+ |
(TTCATTT)n |
Simple_repeat |
| scaffold13786 |
110706 |
110741 |
+ |
(ATAATAT)n |
Simple_repeat |
| scaffold13786 |
112826 |
112885 |
+ |
RS1258 |
Unspecified |
| scaffold13786 |
113108 |
113138 |
+ |
(CCACA)n |
Simple_repeat |
| scaffold13786 |
113416 |
113457 |
+ |
RS17600 |
Unspecified |
| scaffold13786 |
113473 |
113508 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold13786 |
114629 |
114696 |
+ |
(AAT)n |
Simple_repeat |
| scaffold13786 |
114879 |
114928 |
+ |
(TAA)n |
Simple_repeat |
| scaffold13786 |
115632 |
115675 |
+ |
(TAT)n |
Simple_repeat |
| scaffold13786 |
115931 |
116029 |
- |
RS4475 |
Unspecified |
| scaffold13786 |
116563 |
116599 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold13786 |
118518 |
118595 |
+ |
(AAT)n |
Simple_repeat |
| scaffold13786 |
119343 |
119379 |
+ |
(TAA)n |
Simple_repeat |
| scaffold13786 |
121616 |
121724 |
+ |
ATRAN |
DNA? |
| scaffold13786 |
122246 |
122267 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
123356 |
123381 |
+ |
(T)n |
Simple_repeat |
| scaffold13786 |
123711 |
123815 |
+ |
RS17990 |
Unspecified |
| scaffold13786 |
124614 |
124774 |
+ |
RS17138 |
Unspecified |
| scaffold13786 |
124999 |
125116 |
+ |
(ATG)n |
Simple_repeat |
| scaffold13786 |
126486 |
126539 |
+ |
(TTTTTCT)n |
Simple_repeat |
| scaffold13786 |
128663 |
129005 |
+ |
RS6177 |
Unspecified |