scaffold1395 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1395 |
813 |
894 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
1203 |
1302 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
2054 |
2115 |
+ |
(GTT)n |
Simple_repeat |
| scaffold1395 |
2118 |
2145 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1395 |
3102 |
3512 |
+ |
PL351 |
Unspecified |
| scaffold1395 |
3522 |
4121 |
- |
RS1463 |
Unspecified |
| scaffold1395 |
5196 |
5337 |
+ |
(TTCAAT)n |
Simple_repeat |
| scaffold1395 |
5285 |
5345 |
+ |
(TTCAT)n |
Simple_repeat |
| scaffold1395 |
5833 |
5858 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold1395 |
8010 |
8074 |
+ |
GA-rich |
Low_complexity |
| scaffold1395 |
8561 |
8590 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
8764 |
8857 |
+ |
RS869 |
Unspecified |
| scaffold1395 |
10532 |
10574 |
+ |
(GTTTCGT)n |
Simple_repeat |
| scaffold1395 |
11361 |
11418 |
+ |
(GTGCTT)n |
Simple_repeat |
| scaffold1395 |
13950 |
14003 |
+ |
(TGTTTT)n |
Simple_repeat |
| scaffold1395 |
14268 |
14527 |
+ |
RS12409 |
Unspecified |
| scaffold1395 |
14573 |
14719 |
+ |
RS12409 |
Unspecified |
| scaffold1395 |
14748 |
14877 |
- |
RS192 |
Unspecified |
| scaffold1395 |
14817 |
14940 |
- |
RS192 |
Unspecified |
| scaffold1395 |
14873 |
15923 |
- |
RS192 |
Unspecified |
| scaffold1395 |
16365 |
16517 |
- |
RS8359 |
Unspecified |
| scaffold1395 |
16411 |
16774 |
- |
RS1050 |
Unspecified |
| scaffold1395 |
16777 |
16812 |
+ |
(TTTCTT)n |
Simple_repeat |
| scaffold1395 |
17040 |
18443 |
- |
RS200 |
Unspecified |
| scaffold1395 |
19133 |
20228 |
- |
RS105 |
Unspecified |
| scaffold1395 |
20089 |
20493 |
+ |
RS1007 |
Unspecified |
| scaffold1395 |
20225 |
20575 |
+ |
RS1007 |
Unspecified |
| scaffold1395 |
20305 |
21167 |
+ |
RS1007 |
Unspecified |
| scaffold1395 |
20547 |
21720 |
+ |
RS869 |
Unspecified |
| scaffold1395 |
22277 |
22312 |
+ |
(GTTTCGT)n |
Simple_repeat |
| scaffold1395 |
24275 |
24312 |
+ |
(TATTAC)n |
Simple_repeat |
| scaffold1395 |
24753 |
24821 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1395 |
25071 |
25114 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold1395 |
25208 |
25361 |
+ |
RS69 |
Unspecified |
| scaffold1395 |
25287 |
25700 |
+ |
PL143 |
Unspecified |
| scaffold1395 |
26213 |
26256 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold1395 |
26492 |
26861 |
+ |
PL143 |
Unspecified |
| scaffold1395 |
27277 |
27757 |
- |
PL472 |
Unspecified |
| scaffold1395 |
27829 |
27843 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold1395 |
27844 |
27895 |
+ |
(AATAATT)n |
Simple_repeat |
| scaffold1395 |
27896 |
27902 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold1395 |
28321 |
28481 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold1395 |
28414 |
28492 |
- |
COP14_I_MT-int |
LTR/Copia |
| scaffold1395 |
30357 |
30457 |
- |
RS369 |
Unspecified |
| scaffold1395 |
31348 |
31929 |
- |
PL117 |
Unspecified |
| scaffold1395 |
32437 |
32472 |
+ |
(T)n |
Simple_repeat |
| scaffold1395 |
33859 |
34065 |
+ |
RS10018 |
Unspecified |
| scaffold1395 |
38759 |
38791 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
39342 |
39387 |
+ |
(A)n |
Simple_repeat |
| scaffold1395 |
39611 |
39662 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
41162 |
41230 |
+ |
(ACAT)n |
Simple_repeat |
| scaffold1395 |
41741 |
41789 |
+ |
(ATTACT)n |
Simple_repeat |
| scaffold1395 |
42037 |
42112 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1395 |
42546 |
42607 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1395 |
43616 |
43668 |
+ |
MuDR-7_SBi |
DNA/MULE-MuDR |
| scaffold1395 |
43830 |
44672 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold1395 |
44433 |
44663 |
+ |
MUDRB_PT |
DNA/MULE-MuDR |
| scaffold1395 |
44693 |
44732 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
44799 |
44850 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
45730 |
45815 |
+ |
GA-rich |
Low_complexity |
| scaffold1395 |
46280 |
46331 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1395 |
47788 |
48071 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold1395 |
48276 |
48559 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold1395 |
48742 |
49212 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold1395 |
48781 |
48891 |
- |
L1-9_GM |
LINE/L1 |
| scaffold1395 |
50395 |
50472 |
+ |
A-rich |
Low_complexity |
| scaffold1395 |
50752 |
50790 |
+ |
(TGATGAAGA)n |
Simple_repeat |
| scaffold1395 |
52683 |
52709 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1395 |
53730 |
53764 |
+ |
(TTATGC)n |
Simple_repeat |
| scaffold1395 |
54015 |
54185 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1395 |
54843 |
54944 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold1395 |
54978 |
56232 |
- |
RS363 |
Unspecified |
| scaffold1395 |
56407 |
56447 |
+ |
(TATAT)n |
Simple_repeat |
| scaffold1395 |
57471 |
57520 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1395 |
57627 |
58011 |
- |
RS8967 |
Unspecified |
| scaffold1395 |
58045 |
58425 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold1395 |
58812 |
58845 |
+ |
(TTCCTC)n |
Simple_repeat |
| scaffold1395 |
59137 |
59164 |
+ |
(T)n |
Simple_repeat |
| scaffold1395 |
59137 |
59308 |
+ |
(T)n |
Simple_repeat |
| scaffold1395 |
82269 |
82594 |
+ |
PL532 |
Unspecified |