scaffold14051 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14051 |
196 |
258 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold14051 |
2354 |
2410 |
- |
Gypsy-206_ZM-I |
LTR/Gypsy |
| scaffold14051 |
2781 |
2871 |
- |
Gypsy-206_ZM-I |
LTR/Gypsy |
| scaffold14051 |
2962 |
3913 |
+ |
RS1282 |
Unspecified |
| scaffold14051 |
3181 |
4519 |
+ |
RS684 |
Unspecified |
| scaffold14051 |
4397 |
4939 |
+ |
RS969 |
Unspecified |
| scaffold14051 |
4940 |
5552 |
+ |
RS684 |
Unspecified |
| scaffold14051 |
5502 |
5702 |
+ |
RS684 |
Unspecified |
| scaffold14051 |
6655 |
6694 |
+ |
(CAGAA)n |
Simple_repeat |
| scaffold14051 |
6709 |
6870 |
+ |
Gypsy-42_BD-I |
LTR/Gypsy |
| scaffold14051 |
6970 |
7153 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold14051 |
7567 |
7607 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
7870 |
7981 |
+ |
(CACCAG)n |
Simple_repeat |
| scaffold14051 |
7870 |
7938 |
+ |
(CACCAG)n |
Simple_repeat |
| scaffold14051 |
7909 |
7981 |
+ |
PL74 |
Unspecified |
| scaffold14051 |
7976 |
8044 |
+ |
(CACCAG)n |
Simple_repeat |
| scaffold14051 |
9234 |
9270 |
+ |
(CCT)n |
Simple_repeat |
| scaffold14051 |
9318 |
9339 |
+ |
(CAT)n |
Simple_repeat |
| scaffold14051 |
10630 |
10696 |
+ |
(ACAGG)n |
Simple_repeat |
| scaffold14051 |
11035 |
11165 |
+ |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold14051 |
12001 |
12050 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold14051 |
13655 |
13860 |
+ |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold14051 |
15972 |
15998 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold14051 |
16657 |
16867 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14051 |
18082 |
18325 |
+ |
RS4 |
Unspecified |
| scaffold14051 |
18353 |
18391 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
18932 |
19173 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
19138 |
19173 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
19233 |
19496 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
19233 |
19267 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
19254 |
19496 |
- |
PL342 |
Unspecified |
| scaffold14051 |
19494 |
19630 |
- |
RS3561 |
Unspecified |
| scaffold14051 |
19681 |
19716 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold14051 |
20097 |
20115 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
21005 |
22029 |
- |
RS337 |
Unspecified |
| scaffold14051 |
22913 |
23750 |
- |
RS601 |
Unspecified |
| scaffold14051 |
24421 |
24496 |
+ |
(GTG)n |
Simple_repeat |
| scaffold14051 |
24658 |
24852 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14051 |
24658 |
24725 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14051 |
24702 |
24852 |
- |
RS17927 |
Unspecified |
| scaffold14051 |
25097 |
25132 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14051 |
25133 |
25158 |
+ |
(TAC)n |
Simple_repeat |
| scaffold14051 |
25159 |
25182 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14051 |
26590 |
26620 |
+ |
hAT-3_SBi |
DNA/hAT-Ac |
| scaffold14051 |
26621 |
26702 |
+ |
Copia26-VV_I-int |
LTR/Copia |
| scaffold14051 |
27008 |
27237 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold14051 |
27513 |
27622 |
- |
ATHATN3 |
DNA/hAT-Ac |
| scaffold14051 |
27683 |
27824 |
+ |
RS2038 |
Unspecified |
| scaffold14051 |
27842 |
28109 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14051 |
28604 |
28643 |
+ |
(TATTTTT)n |
Simple_repeat |
| scaffold14051 |
30484 |
30534 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14051 |
31653 |
31692 |
- |
Gypsy-73_PTr-LTR |
LTR/Gypsy |
| scaffold14051 |
34739 |
34945 |
- |
RS754 |
Unspecified |
| scaffold14051 |
35088 |
35112 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold14051 |
35671 |
35917 |
- |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold14051 |
35903 |
36094 |
- |
GypsI_I-int |
LTR/Gypsy |
| scaffold14051 |
36101 |
36418 |
+ |
RS869 |
Unspecified |
| scaffold14051 |
37297 |
37560 |
+ |
RS2897 |
Unspecified |
| scaffold14051 |
38212 |
38251 |
+ |
(CAT)n |
Simple_repeat |
| scaffold14051 |
38594 |
38645 |
+ |
(TTTAGAA)n |
Simple_repeat |
| scaffold14051 |
39205 |
39490 |
+ |
RS550 |
Unspecified |
| scaffold14051 |
39473 |
39526 |
- |
PL125 |
Unspecified |
| scaffold14051 |
39484 |
39526 |
- |
PL399 |
Unspecified |
| scaffold14051 |
39557 |
39607 |
+ |
(CCA)n |
Simple_repeat |
| scaffold14051 |
39953 |
39988 |
+ |
(AAAGTA)n |
Simple_repeat |
| scaffold14051 |
40043 |
40099 |
+ |
G-rich |
Low_complexity |
| scaffold14051 |
40820 |
40874 |
+ |
(AT)n |
Simple_repeat |
| scaffold14051 |
40991 |
41055 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14051 |
41413 |
41448 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14051 |
41918 |
41950 |
+ |
(TATT)n |
Simple_repeat |
| scaffold14051 |
42059 |
42443 |
+ |
RS5626 |
Unspecified |
| scaffold14051 |
42565 |
43265 |
+ |
RS2421 |
Unspecified |
| scaffold14051 |
43271 |
43521 |
+ |
RS4717 |
Unspecified |
| scaffold14051 |
43756 |
43975 |
+ |
RS5626 |
Unspecified |
| scaffold14051 |
44004 |
44701 |
+ |
RS2421 |
Unspecified |
| scaffold14051 |
44707 |
45100 |
+ |
RS4717 |
Unspecified |
| scaffold14051 |
44763 |
45677 |
- |
RS2024 |
Unspecified |
| scaffold14051 |
45944 |
46229 |
+ |
RS6497 |
Unspecified |
| scaffold14051 |
47034 |
47081 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14051 |
48357 |
48639 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold14051 |
48968 |
49000 |
+ |
(TGAATT)n |
Simple_repeat |
| scaffold14051 |
49049 |
49103 |
+ |
(TGA)n |
Simple_repeat |
| scaffold14051 |
49182 |
49235 |
+ |
GA-rich |
Low_complexity |
| scaffold14051 |
49588 |
49641 |
+ |
Alfare1_I-int |
LTR/Copia? |
| scaffold14051 |
49660 |
49691 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold14051 |
49781 |
49821 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
50009 |
50046 |
+ |
(A)n |
Simple_repeat |
| scaffold14051 |
50057 |
50095 |
+ |
(CAC)n |
Simple_repeat |
| scaffold14051 |
51146 |
51182 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
51908 |
51945 |
+ |
Gypsy-34_SB-I |
LTR/Gypsy |
| scaffold14051 |
51942 |
52692 |
+ |
PL166 |
Unspecified |
| scaffold14051 |
52719 |
52764 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold14051 |
53190 |
53251 |
+ |
(TGATCT)n |
Simple_repeat |
| scaffold14051 |
53480 |
53536 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
53623 |
53698 |
+ |
(AATAATTT)n |
Simple_repeat |
| scaffold14051 |
53687 |
53721 |
+ |
(ATACAT)n |
Simple_repeat |
| scaffold14051 |
54200 |
54382 |
+ |
(TAAGAA)n |
Simple_repeat |
| scaffold14051 |
54383 |
56108 |
+ |
(TGAATAG)n |
Simple_repeat |
| scaffold14051 |
54383 |
54435 |
+ |
(TGAATAG)n |
Simple_repeat |
| scaffold14051 |
54424 |
56108 |
- |
RS2 |
Unspecified |
| scaffold14051 |
56127 |
56410 |
+ |
RS6497 |
Unspecified |
| scaffold14051 |
56669 |
56894 |
- |
RS10250 |
Unspecified |
| scaffold14051 |
56918 |
57068 |
+ |
(AATTTGA)n |
Simple_repeat |
| scaffold14051 |
57069 |
57127 |
+ |
(AATTCT)n |
Simple_repeat |
| scaffold14051 |
57128 |
57306 |
+ |
(AATTTGA)n |
Simple_repeat |
| scaffold14051 |
57448 |
57481 |
+ |
(AACTT)n |
Simple_repeat |
| scaffold14051 |
57536 |
57941 |
+ |
RS8769 |
Unspecified |
| scaffold14051 |
59836 |
59888 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold14051 |
60729 |
60800 |
+ |
(CAAT)n |
Simple_repeat |
| scaffold14051 |
61250 |
61364 |
- |
Copia-4_SL-LTR |
LTR/Copia |
| scaffold14051 |
62769 |
63125 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold14051 |
63557 |
63726 |
+ |
RS8600 |
Unspecified |
| scaffold14051 |
63725 |
63765 |
+ |
RS1565 |
Unspecified |
| scaffold14051 |
63759 |
64986 |
- |
RS2023 |
Unspecified |
| scaffold14051 |
64981 |
65264 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold14051 |
65462 |
65744 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold14051 |
65799 |
65896 |
- |
RS2023 |
Unspecified |
| scaffold14051 |
66534 |
66818 |
+ |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold14051 |
67998 |
68540 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
68793 |
68829 |
+ |
(GAT)n |
Simple_repeat |
| scaffold14051 |
69065 |
69156 |
- |
Copia15-VV_I-int |
LTR/Copia |
| scaffold14051 |
69852 |
69924 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
70544 |
70595 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
72637 |
72656 |
+ |
(TTC)n |
Simple_repeat |
| scaffold14051 |
73333 |
73582 |
+ |
RS8600 |
Unspecified |
| scaffold14051 |
74047 |
74102 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold14051 |
75878 |
76095 |
+ |
RS11530 |
Unspecified |
| scaffold14051 |
76126 |
76511 |
+ |
RS6697 |
Unspecified |
| scaffold14051 |
76603 |
76619 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
76808 |
77070 |
- |
RS6229 |
Unspecified |
| scaffold14051 |
76854 |
77314 |
+ |
RS845 |
Unspecified |
| scaffold14051 |
77376 |
77545 |
+ |
RS1178 |
Unspecified |
| scaffold14051 |
77809 |
77918 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
78097 |
78115 |
+ |
(AAC)n |
Simple_repeat |
| scaffold14051 |
78601 |
78678 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
79009 |
79040 |
+ |
RS3519 |
Unspecified |
| scaffold14051 |
79042 |
79403 |
+ |
RS3519 |
Unspecified |
| scaffold14051 |
79359 |
79487 |
+ |
RS468 |
Unspecified |
| scaffold14051 |
79630 |
79660 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
79749 |
79777 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold14051 |
81040 |
81073 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
81259 |
81319 |
+ |
A-rich |
Low_complexity |
| scaffold14051 |
81432 |
81493 |
+ |
GA-rich |
Low_complexity |
| scaffold14051 |
81570 |
81597 |
+ |
GA-rich |
Low_complexity |
| scaffold14051 |
81600 |
81624 |
+ |
(GGAGA)n |
Simple_repeat |
| scaffold14051 |
81984 |
82004 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
82044 |
82062 |
+ |
(CGA)n |
Simple_repeat |
| scaffold14051 |
84723 |
84746 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
85681 |
85701 |
+ |
(TA)n |
Simple_repeat |
| scaffold14051 |
87342 |
87366 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
88256 |
88289 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
88425 |
88586 |
+ |
RS2719 |
Unspecified |
| scaffold14051 |
88938 |
88970 |
+ |
(T)n |
Simple_repeat |
| scaffold14051 |
89136 |
89437 |
- |
RS12789 |
Unspecified |
| scaffold14051 |
89787 |
90186 |
+ |
RS266 |
Unspecified |
| scaffold14051 |
90609 |
90635 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold14051 |
90656 |
90690 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold14051 |
91525 |
91554 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold14051 |
92264 |
92394 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
92945 |
93270 |
- |
RS6214 |
Unspecified |
| scaffold14051 |
93507 |
94111 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
94342 |
94539 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
95137 |
95173 |
+ |
(GTTCT)n |
Simple_repeat |
| scaffold14051 |
95235 |
95455 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
95481 |
97103 |
+ |
MEGY-I_MT |
LTR/Gypsy |
| scaffold14051 |
95481 |
96995 |
+ |
MEGY-I_MT |
LTR/Gypsy |