scaffold14247 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14247 |
3 |
431 |
+ |
(TTCTTT)n |
Simple_repeat |
| scaffold14247 |
394 |
431 |
+ |
(TTCTTT)n |
Simple_repeat |
| scaffold14247 |
1012 |
1604 |
+ |
PL956 |
Unspecified |
| scaffold14247 |
2876 |
2913 |
+ |
(TGTGAAT)n |
Simple_repeat |
| scaffold14247 |
4069 |
4926 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold14247 |
6193 |
6313 |
+ |
(ATG)n |
Simple_repeat |
| scaffold14247 |
6343 |
6363 |
+ |
(GAT)n |
Simple_repeat |
| scaffold14247 |
9277 |
9307 |
+ |
(TTTTTTA)n |
Simple_repeat |
| scaffold14247 |
9316 |
9360 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
10247 |
10413 |
+ |
RS4884 |
Unspecified |
| scaffold14247 |
10595 |
10658 |
+ |
(CAA)n |
Simple_repeat |
| scaffold14247 |
11265 |
11298 |
+ |
(AATTCT)n |
Simple_repeat |
| scaffold14247 |
11809 |
11871 |
+ |
(CTTCAT)n |
Simple_repeat |
| scaffold14247 |
12084 |
12156 |
+ |
(TGT)n |
Simple_repeat |
| scaffold14247 |
12161 |
12222 |
+ |
G-rich |
Low_complexity |
| scaffold14247 |
12236 |
12387 |
+ |
(TTG)n |
Simple_repeat |
| scaffold14247 |
12387 |
12484 |
- |
RS4674 |
Unspecified |
| scaffold14247 |
12605 |
12704 |
- |
Gypsy-3_PD-I |
LTR/Gypsy |
| scaffold14247 |
12681 |
12710 |
- |
DIASPORA_I-int |
LTR/Gypsy |
| scaffold14247 |
13234 |
13421 |
+ |
RS1201 |
Unspecified |
| scaffold14247 |
13783 |
13815 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
14291 |
14341 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold14247 |
14983 |
15206 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14247 |
14983 |
15027 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold14247 |
15010 |
15206 |
- |
RS725 |
Unspecified |
| scaffold14247 |
15071 |
15210 |
+ |
RS337 |
Unspecified |
| scaffold14247 |
15380 |
15509 |
+ |
(TAA)n |
Simple_repeat |
| scaffold14247 |
16824 |
16883 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
17405 |
17447 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
19215 |
19264 |
+ |
RS18111 |
Unspecified |
| scaffold14247 |
21163 |
21243 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold14247 |
26001 |
26059 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
26264 |
26317 |
+ |
(AAGCTA)n |
Simple_repeat |
| scaffold14247 |
26451 |
26482 |
+ |
GA-rich |
Low_complexity |
| scaffold14247 |
26689 |
26718 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
26938 |
27072 |
- |
RS5874 |
Unspecified |
| scaffold14247 |
27071 |
27336 |
- |
RS2382 |
Unspecified |
| scaffold14247 |
27342 |
27382 |
+ |
EnSpm2_HV |
DNA/CMC-EnSpm |
| scaffold14247 |
30235 |
30271 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
30554 |
30584 |
+ |
(ATTTG)n |
Simple_repeat |
| scaffold14247 |
30747 |
30799 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold14247 |
30962 |
31048 |
- |
RS6477 |
Unspecified |
| scaffold14247 |
31118 |
32110 |
+ |
RS5575 |
Unspecified |
| scaffold14247 |
35967 |
36061 |
+ |
PL852 |
Unspecified |
| scaffold14247 |
38151 |
38271 |
+ |
PL852 |
Unspecified |
| scaffold14247 |
38264 |
38354 |
+ |
PL852 |
Unspecified |
| scaffold14247 |
39345 |
39366 |
+ |
(AGG)n |
Simple_repeat |
| scaffold14247 |
39567 |
39740 |
+ |
(A)n |
Simple_repeat |
| scaffold14247 |
39695 |
39740 |
+ |
(A)n |
Simple_repeat |
| scaffold14247 |
39788 |
39848 |
+ |
RS12897 |
Unspecified |
| scaffold14247 |
40080 |
40223 |
+ |
RS7685 |
Unspecified |
| scaffold14247 |
43217 |
43681 |
+ |
G-rich |
Low_complexity |
| scaffold14247 |
43884 |
43915 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold14247 |
44281 |
44498 |
+ |
(GGTTAAG)n |
Simple_repeat |
| scaffold14247 |
45002 |
45212 |
- |
RS4986 |
Unspecified |
| scaffold14247 |
45032 |
45451 |
+ |
RS4377 |
Unspecified |
| scaffold14247 |
45598 |
45623 |
+ |
(GAG)n |
Simple_repeat |
| scaffold14247 |
46440 |
46486 |
+ |
(GAG)n |
Simple_repeat |
| scaffold14247 |
46941 |
47013 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
47063 |
47467 |
+ |
(GGTTAAG)n |
Simple_repeat |
| scaffold14247 |
47467 |
47521 |
- |
RS4857 |
Unspecified |
| scaffold14247 |
47655 |
47676 |
+ |
(CA)n |
Simple_repeat |
| scaffold14247 |
47701 |
47971 |
+ |
RS2031 |
Unspecified |
| scaffold14247 |
50837 |
50890 |
+ |
(TTCA)n |
Simple_repeat |
| scaffold14247 |
52452 |
52485 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
58407 |
58427 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
58686 |
58702 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
59510 |
59538 |
+ |
(TTA)n |
Simple_repeat |
| scaffold14247 |
62120 |
62145 |
+ |
(TTG)n |
Simple_repeat |
| scaffold14247 |
62911 |
62956 |
+ |
(CT)n |
Simple_repeat |
| scaffold14247 |
62972 |
63102 |
+ |
RS7146 |
Unspecified |
| scaffold14247 |
63324 |
63414 |
+ |
Gypsy3-ZM_I-int |
LTR/Gypsy |
| scaffold14247 |
63985 |
64052 |
+ |
Gypsy3-ZM_I-int |
LTR/Gypsy |
| scaffold14247 |
64101 |
64624 |
+ |
Gypsy-135_GM-I |
LTR/Gypsy |
| scaffold14247 |
64765 |
67357 |
+ |
ATGP3I |
LTR/Gypsy |
| scaffold14247 |
64765 |
67438 |
+ |
ATGP3I |
LTR/Gypsy |
| scaffold14247 |
67335 |
67438 |
- |
PL834 |
Unspecified |
| scaffold14247 |
68007 |
68145 |
- |
PL203 |
Unspecified |
| scaffold14247 |
69253 |
69491 |
- |
RS581 |
Unspecified |
| scaffold14247 |
69694 |
69829 |
+ |
RS1258 |
Unspecified |
| scaffold14247 |
69831 |
69878 |
+ |
RS1258 |
Unspecified |
| scaffold14247 |
70008 |
70045 |
+ |
(ATC)n |
Simple_repeat |
| scaffold14247 |
70156 |
70182 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
70681 |
70697 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
70947 |
71184 |
- |
RS13348 |
Unspecified |
| scaffold14247 |
71480 |
71532 |
+ |
(ATTTTTC)n |
Simple_repeat |
| scaffold14247 |
71750 |
72118 |
- |
RS132 |
Unspecified |
| scaffold14247 |
72279 |
72895 |
- |
RS340 |
Unspecified |
| scaffold14247 |
73083 |
74700 |
- |
RS265 |
Unspecified |
| scaffold14247 |
74737 |
74948 |
+ |
RS5314 |
Unspecified |
| scaffold14247 |
75797 |
76059 |
+ |
RS736 |
Unspecified |
| scaffold14247 |
76037 |
76136 |
- |
RS5314 |
Unspecified |
| scaffold14247 |
77024 |
77631 |
- |
RS984 |
Unspecified |
| scaffold14247 |
79327 |
79504 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
80250 |
80447 |
- |
RS1381 |
Unspecified |
| scaffold14247 |
81131 |
81727 |
+ |
RS706 |
Unspecified |
| scaffold14247 |
81735 |
81932 |
+ |
PL714 |
Unspecified |
| scaffold14247 |
82115 |
82159 |
+ |
(AAC)n |
Simple_repeat |
| scaffold14247 |
82395 |
82443 |
+ |
(ACA)n |
Simple_repeat |
| scaffold14247 |
83107 |
83164 |
+ |
(GAT)n |
Simple_repeat |
| scaffold14247 |
83238 |
83271 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14247 |
83701 |
83746 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14247 |
83968 |
84350 |
+ |
RS1368 |
Unspecified |
| scaffold14247 |
84311 |
84622 |
+ |
RS2107 |
Unspecified |
| scaffold14247 |
84622 |
84743 |
+ |
RS3802 |
Unspecified |
| scaffold14247 |
84648 |
84820 |
+ |
RS4244 |
Unspecified |
| scaffold14247 |
84715 |
85004 |
- |
RS5890 |
Unspecified |
| scaffold14247 |
85092 |
85163 |
+ |
(AACAGC)n |
Simple_repeat |
| scaffold14247 |
86278 |
86321 |
+ |
(CATA)n |
Simple_repeat |
| scaffold14247 |
86624 |
86970 |
+ |
RS9477 |
Unspecified |
| scaffold14247 |
86700 |
87146 |
+ |
RS2801 |
Unspecified |
| scaffold14247 |
87364 |
87403 |
+ |
(ACAACA)n |
Simple_repeat |
| scaffold14247 |
87432 |
87506 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold14247 |
87719 |
87777 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14247 |
87896 |
88057 |
- |
RS132 |
Unspecified |
| scaffold14247 |
88063 |
88119 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold14247 |
88283 |
88318 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
89524 |
89830 |
+ |
RS499 |
Unspecified |
| scaffold14247 |
90036 |
90067 |
+ |
(TCTTTA)n |
Simple_repeat |
| scaffold14247 |
90279 |
90589 |
+ |
RS11184 |
Unspecified |
| scaffold14247 |
90628 |
91149 |
- |
Copia34-PTR_I-int |
LTR/Copia |
| scaffold14247 |
91197 |
91497 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold14247 |
91713 |
92000 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold14247 |
92009 |
92242 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14247 |
92009 |
93071 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14247 |
92016 |
92180 |
- |
Copia-15_Mad-I |
LTR/Copia |
| scaffold14247 |
92174 |
93071 |
+ |
RS260 |
Unspecified |
| scaffold14247 |
93931 |
94545 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14247 |
94114 |
95346 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14247 |
94462 |
94490 |
+ |
(CAAGG)n |
Simple_repeat |
| scaffold14247 |
94670 |
95334 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold14247 |
96494 |
97152 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14247 |
97122 |
97237 |
+ |
Copia-100_Mad-I |
LTR/Copia |
| scaffold14247 |
97241 |
97584 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14247 |
98348 |
98399 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14247 |
99231 |
99544 |
- |
PL834 |
Unspecified |
| scaffold14247 |
99272 |
99542 |
- |
RS446 |
Unspecified |
| scaffold14247 |
99537 |
100339 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold14247 |
100702 |
101536 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold14247 |
101845 |
102120 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold14247 |
102236 |
103162 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14247 |
102588 |
102718 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold14247 |
102801 |
103105 |
- |
Copia-27_ST-I |
LTR/Copia |
| scaffold14247 |
103309 |
103374 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold14247 |
103480 |
103790 |
+ |
RS11184 |
Unspecified |
| scaffold14247 |
103988 |
104010 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold14247 |
104386 |
104677 |
- |
RS29 |
Unspecified |
| scaffold14247 |
104695 |
104826 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold14247 |
106499 |
106522 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
107905 |
107938 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
110860 |
110897 |
+ |
(TATATTA)n |
Simple_repeat |
| scaffold14247 |
112719 |
112804 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14247 |
113413 |
113450 |
+ |
(A)n |
Simple_repeat |
| scaffold14247 |
113578 |
113609 |
+ |
(T)n |
Simple_repeat |
| scaffold14247 |
113724 |
113745 |
+ |
(A)n |
Simple_repeat |
| scaffold14247 |
113966 |
114162 |
- |
PL293 |
Unspecified |
| scaffold14247 |
114982 |
115091 |
- |
RS1 |
Unspecified |
| scaffold14247 |
115874 |
115963 |
+ |
RS1975 |
Unspecified |
| scaffold14247 |
116031 |
116055 |
+ |
(A)n |
Simple_repeat |
| scaffold14247 |
116135 |
116271 |
+ |
(AT)n |
Simple_repeat |
| scaffold14247 |
116221 |
116271 |
+ |
(AT)n |
Simple_repeat |
| scaffold14247 |
116352 |
116423 |
+ |
RS1975 |
Unspecified |
| scaffold14247 |
116594 |
117153 |
+ |
PL329 |
Unspecified |
| scaffold14247 |
117175 |
117258 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold14247 |
117960 |
117986 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
118633 |
118673 |
+ |
A-rich |
Low_complexity |
| scaffold14247 |
118828 |
118882 |
+ |
(CTCCGC)n |
Simple_repeat |
| scaffold14247 |
119227 |
119355 |
+ |
RS1167 |
Unspecified |
| scaffold14247 |
119253 |
119355 |
- |
PL819 |
Unspecified |
| scaffold14247 |
119415 |
119776 |
+ |
PL268 |
Unspecified |
| scaffold14247 |
123004 |
123718 |
+ |
RS77 |
Unspecified |