scaffold1431 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1431 |
12 |
45 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
534 |
602 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
951 |
987 |
+ |
(CATACT)n |
Simple_repeat |
| scaffold1431 |
1425 |
1678 |
+ |
RS586 |
Unspecified |
| scaffold1431 |
1574 |
1692 |
- |
RS1172 |
Unspecified |
| scaffold1431 |
1786 |
1889 |
+ |
RS4300 |
Unspecified |
| scaffold1431 |
1800 |
2024 |
- |
RS1095 |
Unspecified |
| scaffold1431 |
2066 |
2133 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
2556 |
2577 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
2644 |
2665 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
2813 |
3103 |
+ |
RS1746 |
Unspecified |
| scaffold1431 |
2883 |
3142 |
- |
RS1746 |
Unspecified |
| scaffold1431 |
3456 |
3745 |
+ |
RS458 |
Unspecified |
| scaffold1431 |
4187 |
4601 |
- |
PL91 |
Unspecified |
| scaffold1431 |
5441 |
5474 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
5476 |
5736 |
- |
RS356 |
Unspecified |
| scaffold1431 |
5838 |
6199 |
+ |
RS4042 |
Unspecified |
| scaffold1431 |
7877 |
7905 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
7942 |
7994 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
8155 |
8175 |
+ |
(T)n |
Simple_repeat |
| scaffold1431 |
8490 |
8563 |
- |
hAT-14N1_ZM |
DNA/hAT-Tip100 |
| scaffold1431 |
8612 |
8858 |
+ |
RS6283 |
Unspecified |
| scaffold1431 |
9163 |
9196 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
9197 |
9247 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1431 |
10153 |
10358 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1431 |
10269 |
10358 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1431 |
10952 |
11150 |
+ |
RS9448 |
Unspecified |
| scaffold1431 |
11277 |
11340 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
11628 |
11770 |
+ |
RS4832 |
Unspecified |
| scaffold1431 |
12024 |
12293 |
+ |
RS3590 |
Unspecified |
| scaffold1431 |
12099 |
12328 |
+ |
RS160 |
Unspecified |
| scaffold1431 |
12788 |
12930 |
+ |
RS4832 |
Unspecified |
| scaffold1431 |
13184 |
13453 |
+ |
RS3590 |
Unspecified |
| scaffold1431 |
13259 |
13488 |
+ |
RS160 |
Unspecified |
| scaffold1431 |
13481 |
14133 |
+ |
RS1875 |
Unspecified |
| scaffold1431 |
15121 |
15182 |
+ |
(TCTATTT)n |
Simple_repeat |
| scaffold1431 |
15999 |
16060 |
+ |
(TATA)n |
Simple_repeat |
| scaffold1431 |
16853 |
16879 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1431 |
16887 |
16933 |
+ |
(TTTCTTG)n |
Simple_repeat |
| scaffold1431 |
18730 |
19382 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1431 |
19559 |
19613 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1431 |
20579 |
20613 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
20726 |
20753 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
21463 |
21502 |
+ |
G-rich |
Low_complexity |
| scaffold1431 |
23569 |
23603 |
+ |
(T)n |
Simple_repeat |
| scaffold1431 |
23707 |
23736 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
24281 |
24302 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
24492 |
24528 |
+ |
(T)n |
Simple_repeat |
| scaffold1431 |
24570 |
24609 |
+ |
(T)n |
Simple_repeat |
| scaffold1431 |
24610 |
24616 |
+ |
(TTTTATT)n |
Simple_repeat |
| scaffold1431 |
24970 |
25022 |
+ |
(AAG)n |
Simple_repeat |
| scaffold1431 |
25221 |
25258 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
25418 |
25464 |
+ |
(AATTTAT)n |
Simple_repeat |
| scaffold1431 |
25594 |
25646 |
+ |
ATRAN |
DNA? |
| scaffold1431 |
25595 |
25683 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold1431 |
25987 |
26039 |
+ |
ATRAN |
DNA? |
| scaffold1431 |
25988 |
26076 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold1431 |
26100 |
26245 |
- |
RS1166 |
Unspecified |
| scaffold1431 |
26225 |
26288 |
- |
RS18232 |
Unspecified |
| scaffold1431 |
26603 |
26801 |
+ |
PL9 |
Unspecified |
| scaffold1431 |
26802 |
27178 |
- |
RS545 |
Unspecified |
| scaffold1431 |
30589 |
30706 |
- |
RS2096 |
Unspecified |
| scaffold1431 |
31499 |
32176 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold1431 |
32157 |
32252 |
- |
Gypsy-137_GM-I |
LTR/Gypsy |
| scaffold1431 |
32425 |
33086 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1431 |
33258 |
33445 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1431 |
33633 |
34504 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1431 |
34805 |
34909 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1431 |
35769 |
36132 |
- |
RS2558 |
Unspecified |
| scaffold1431 |
36147 |
36183 |
+ |
(TTTCC)n |
Simple_repeat |
| scaffold1431 |
36213 |
36279 |
+ |
G-rich |
Low_complexity |
| scaffold1431 |
37646 |
37664 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
38912 |
38933 |
+ |
(A)n |
Simple_repeat |
| scaffold1431 |
39047 |
39515 |
+ |
PL582 |
Unspecified |
| scaffold1431 |
39607 |
39659 |
+ |
A-rich |
Low_complexity |
| scaffold1431 |
40621 |
40763 |
- |
RS1272 |
Unspecified |
| scaffold1431 |
41161 |
41387 |
+ |
(TTG)n |
Simple_repeat |
| scaffold1431 |
41533 |
42606 |
- |
RS265 |
Unspecified |
| scaffold1431 |
42725 |
43067 |
- |
Copia-38-I_ZM |
LTR/Copia |
| scaffold1431 |
43910 |
44059 |
+ |
RS101 |
Unspecified |
| scaffold1431 |
45909 |
45965 |
- |
PL381 |
Unspecified |
| scaffold1431 |
45915 |
47613 |
+ |
RS2 |
Unspecified |
| scaffold1431 |
47746 |
47812 |
+ |
(ATTCACT)n |
Simple_repeat |
| scaffold1431 |
47813 |
49097 |
+ |
RS658 |
Unspecified |
| scaffold1431 |
49098 |
50123 |
- |
PL834 |
Unspecified |
| scaffold1431 |
50125 |
50491 |
+ |
RS2725 |
Unspecified |
| scaffold1431 |
50490 |
50558 |
+ |
(CACTATT)n |
Simple_repeat |
| scaffold1431 |
50640 |
52721 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1431 |
50715 |
51334 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold1431 |
51359 |
51626 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold1431 |
51814 |
52679 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold1431 |
52732 |
52982 |
+ |
RS2297 |
Unspecified |
| scaffold1431 |
53243 |
53404 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1431 |
53613 |
53663 |
+ |
(TGTTAAT)n |
Simple_repeat |
| scaffold1431 |
53772 |
53855 |
+ |
(TG)n |
Simple_repeat |
| scaffold1431 |
53971 |
54091 |
+ |
Gypsy-22_SB-I |
LTR/Gypsy |
| scaffold1431 |
57073 |
57560 |
+ |
PL364 |
Unspecified |
| scaffold1431 |
57455 |
57749 |
+ |
RS3922 |
Unspecified |
| scaffold1431 |
57728 |
58222 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1431 |
57754 |
58212 |
+ |
Gypsy-20_BRa-I |
LTR/Gypsy |
| scaffold1431 |
58216 |
58357 |
+ |
RS3922 |
Unspecified |
| scaffold1431 |
58358 |
58830 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold1431 |
58947 |
59029 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold1431 |
59563 |
59630 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold1431 |
59701 |
60358 |
- |
RS169 |
Unspecified |
| scaffold1431 |
60347 |
61204 |
- |
RS409 |
Unspecified |
| scaffold1431 |
61206 |
61487 |
- |
RS409 |
Unspecified |
| scaffold1431 |
61504 |
61566 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold1431 |
62300 |
62447 |
+ |
(AAC)n |
Simple_repeat |
| scaffold1431 |
62787 |
62828 |
+ |
(CCTTCCT)n |
Simple_repeat |
| scaffold1431 |
62944 |
63133 |
+ |
RS10650 |
Unspecified |
| scaffold1431 |
67739 |
67841 |
- |
PIGY-LTR_PS |
LTR/Gypsy |