scaffold14556 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14556 |
1 |
1082 |
- |
RS305 |
Unspecified |
| scaffold14556 |
494 |
1331 |
- |
RS307 |
Unspecified |
| scaffold14556 |
1382 |
2306 |
- |
RS307 |
Unspecified |
| scaffold14556 |
3283 |
3336 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
3646 |
3701 |
+ |
(AATT)n |
Simple_repeat |
| scaffold14556 |
4258 |
4317 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
4492 |
4554 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
4764 |
4794 |
+ |
(ATAATG)n |
Simple_repeat |
| scaffold14556 |
6910 |
6932 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
6996 |
7024 |
+ |
(AATC)n |
Simple_repeat |
| scaffold14556 |
9828 |
9884 |
+ |
RS13020 |
Unspecified |
| scaffold14556 |
11096 |
11132 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
11312 |
11431 |
+ |
PL754 |
Unspecified |
| scaffold14556 |
11338 |
11446 |
- |
RS4475 |
Unspecified |
| scaffold14556 |
11847 |
12243 |
+ |
RS29 |
Unspecified |
| scaffold14556 |
12341 |
12468 |
+ |
RS3668 |
Unspecified |
| scaffold14556 |
13749 |
13858 |
- |
RS6086 |
Unspecified |
| scaffold14556 |
14031 |
14057 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
14574 |
14645 |
+ |
(TGAATTT)n |
Simple_repeat |
| scaffold14556 |
15473 |
15496 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold14556 |
15979 |
16641 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold14556 |
16859 |
18698 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold14556 |
16859 |
18743 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold14556 |
18679 |
18743 |
- |
RS18111 |
Unspecified |
| scaffold14556 |
21126 |
22384 |
+ |
Copia-4_GM-I |
LTR/Copia |
| scaffold14556 |
24389 |
24443 |
+ |
(AGATGA)n |
Simple_repeat |
| scaffold14556 |
25841 |
25891 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
25968 |
25996 |
+ |
(TGC)n |
Simple_repeat |
| scaffold14556 |
26215 |
26339 |
+ |
RS3988 |
Unspecified |
| scaffold14556 |
26340 |
26671 |
+ |
RS2543 |
Unspecified |
| scaffold14556 |
26751 |
26768 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
26817 |
27141 |
- |
RS2543 |
Unspecified |
| scaffold14556 |
27148 |
27253 |
+ |
RS5074 |
Unspecified |
| scaffold14556 |
27230 |
27405 |
+ |
RS6560 |
Unspecified |
| scaffold14556 |
27500 |
27554 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
27787 |
27810 |
+ |
(A)n |
Simple_repeat |
| scaffold14556 |
27831 |
28045 |
- |
RS13775 |
Unspecified |
| scaffold14556 |
28060 |
28093 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold14556 |
28291 |
28387 |
+ |
RS9025 |
Unspecified |
| scaffold14556 |
29028 |
29107 |
+ |
(CAACC)n |
Simple_repeat |
| scaffold14556 |
31662 |
31739 |
- |
RS8762 |
Unspecified |
| scaffold14556 |
31883 |
32156 |
+ |
PL582 |
Unspecified |
| scaffold14556 |
32358 |
32453 |
- |
RS2339 |
Unspecified |
| scaffold14556 |
32432 |
32678 |
+ |
RS202 |
Unspecified |
| scaffold14556 |
33049 |
33075 |
+ |
(A)n |
Simple_repeat |
| scaffold14556 |
33237 |
33573 |
- |
RS795 |
Unspecified |
| scaffold14556 |
33687 |
33880 |
+ |
RS429 |
Unspecified |
| scaffold14556 |
34856 |
34876 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
35323 |
35379 |
+ |
(TGGTGG)n |
Simple_repeat |
| scaffold14556 |
37362 |
37454 |
- |
RS12449 |
Unspecified |
| scaffold14556 |
37768 |
37865 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
38472 |
38507 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold14556 |
39155 |
39764 |
+ |
RS16737 |
Unspecified |
| scaffold14556 |
40172 |
40215 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
40419 |
40567 |
- |
PL712 |
Unspecified |
| scaffold14556 |
40917 |
41526 |
+ |
RS16737 |
Unspecified |
| scaffold14556 |
42758 |
42852 |
- |
RS18358 |
Unspecified |
| scaffold14556 |
43310 |
43330 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14556 |
43682 |
43724 |
+ |
(ATGG)n |
Simple_repeat |
| scaffold14556 |
43878 |
43909 |
+ |
(TTATTT)n |
Simple_repeat |
| scaffold14556 |
44667 |
44696 |
+ |
(GAATT)n |
Simple_repeat |
| scaffold14556 |
44964 |
45089 |
+ |
RS12750 |
Unspecified |
| scaffold14556 |
45105 |
45204 |
+ |
RS18358 |
Unspecified |
| scaffold14556 |
45515 |
45554 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
48565 |
48585 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
48808 |
48860 |
+ |
(ATC)n |
Simple_repeat |
| scaffold14556 |
48938 |
48968 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14556 |
48989 |
49089 |
+ |
(AGT)n |
Simple_repeat |
| scaffold14556 |
49333 |
49370 |
+ |
(GTT)n |
Simple_repeat |
| scaffold14556 |
49667 |
49705 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold14556 |
49914 |
49968 |
+ |
(TGT)n |
Simple_repeat |
| scaffold14556 |
50374 |
50780 |
- |
PL2 |
Unspecified |
| scaffold14556 |
51067 |
51108 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
51494 |
51675 |
+ |
RS178 |
Unspecified |
| scaffold14556 |
52410 |
52554 |
+ |
RS6138 |
Unspecified |
| scaffold14556 |
52628 |
52702 |
+ |
RS15342 |
Unspecified |
| scaffold14556 |
52787 |
52883 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold14556 |
53803 |
53947 |
+ |
RS6138 |
Unspecified |
| scaffold14556 |
53982 |
54815 |
+ |
RS14906 |
Unspecified |
| scaffold14556 |
55085 |
55235 |
+ |
RS17398 |
Unspecified |
| scaffold14556 |
55299 |
55561 |
+ |
RS15640 |
Unspecified |
| scaffold14556 |
55584 |
55740 |
+ |
RS15342 |
Unspecified |
| scaffold14556 |
55864 |
56450 |
+ |
RS16631 |
Unspecified |
| scaffold14556 |
56479 |
56694 |
+ |
RS16111 |
Unspecified |
| scaffold14556 |
56753 |
56973 |
+ |
RS18279 |
Unspecified |
| scaffold14556 |
57580 |
57693 |
+ |
RS17074 |
Unspecified |
| scaffold14556 |
57701 |
57921 |
+ |
RS16488 |
Unspecified |
| scaffold14556 |
58877 |
59956 |
+ |
RS665 |
Unspecified |
| scaffold14556 |
59686 |
60105 |
+ |
RS941 |
Unspecified |
| scaffold14556 |
60210 |
60245 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold14556 |
60281 |
60534 |
- |
RS842 |
Unspecified |
| scaffold14556 |
61012 |
61156 |
+ |
RS6138 |
Unspecified |
| scaffold14556 |
61191 |
62024 |
+ |
RS14906 |
Unspecified |
| scaffold14556 |
62294 |
62444 |
+ |
RS17398 |
Unspecified |
| scaffold14556 |
62508 |
62770 |
+ |
RS15640 |
Unspecified |
| scaffold14556 |
62793 |
62949 |
+ |
RS15342 |
Unspecified |
| scaffold14556 |
63073 |
63659 |
+ |
RS16631 |
Unspecified |
| scaffold14556 |
63688 |
63903 |
+ |
RS16111 |
Unspecified |
| scaffold14556 |
63962 |
64182 |
+ |
RS18279 |
Unspecified |
| scaffold14556 |
64795 |
64908 |
+ |
RS17074 |
Unspecified |
| scaffold14556 |
64916 |
65136 |
+ |
RS16488 |
Unspecified |
| scaffold14556 |
66387 |
66427 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold14556 |
66590 |
66777 |
- |
RS470 |
Unspecified |
| scaffold14556 |
68843 |
68888 |
+ |
(AGCACC)n |
Simple_repeat |
| scaffold14556 |
69543 |
69784 |
- |
RS4 |
Unspecified |
| scaffold14556 |
70825 |
71014 |
+ |
RS429 |
Unspecified |
| scaffold14556 |
71196 |
71222 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
72783 |
72818 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold14556 |
73572 |
73588 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
74339 |
74377 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
74485 |
74627 |
- |
RS1121 |
Unspecified |
| scaffold14556 |
75224 |
75478 |
+ |
RS758 |
Unspecified |
| scaffold14556 |
76472 |
76494 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
77760 |
77798 |
+ |
(GGAGTC)n |
Simple_repeat |
| scaffold14556 |
77813 |
77863 |
+ |
(GACAGG)n |
Simple_repeat |
| scaffold14556 |
77898 |
77916 |
+ |
(GGA)n |
Simple_repeat |
| scaffold14556 |
79394 |
79412 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
84125 |
84149 |
+ |
(AAAC)n |
Simple_repeat |
| scaffold14556 |
84636 |
84657 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14556 |
84714 |
84737 |
+ |
(TGA)n |
Simple_repeat |
| scaffold14556 |
85135 |
85182 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
85895 |
86280 |
+ |
RS1279 |
Unspecified |
| scaffold14556 |
86276 |
86415 |
- |
Gypsy-13_Mad-I |
LTR/Gypsy |
| scaffold14556 |
86468 |
86501 |
+ |
(TTC)n |
Simple_repeat |
| scaffold14556 |
87497 |
87514 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
87659 |
87929 |
- |
RS1 |
Unspecified |
| scaffold14556 |
87899 |
87933 |
+ |
RS1 |
Unspecified |
| scaffold14556 |
88918 |
89023 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
89123 |
89148 |
+ |
(TACAA)n |
Simple_repeat |
| scaffold14556 |
89589 |
89844 |
- |
RS4 |
Unspecified |
| scaffold14556 |
90453 |
90611 |
- |
RS459 |
Unspecified |
| scaffold14556 |
91082 |
91175 |
+ |
RS4475 |
Unspecified |
| scaffold14556 |
91221 |
91246 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
91509 |
91538 |
+ |
(CATTG)n |
Simple_repeat |
| scaffold14556 |
92086 |
92326 |
+ |
RS532 |
Unspecified |
| scaffold14556 |
92127 |
92342 |
+ |
RS6927 |
Unspecified |
| scaffold14556 |
92414 |
92470 |
+ |
(AAGAGTA)n |
Simple_repeat |
| scaffold14556 |
92541 |
92615 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold14556 |
92619 |
92745 |
+ |
(TTAACGG)n |
Simple_repeat |
| scaffold14556 |
92916 |
92945 |
+ |
(GAATT)n |
Simple_repeat |
| scaffold14556 |
93276 |
93413 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14556 |
93276 |
93327 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold14556 |
93303 |
93413 |
- |
RS18111 |
Unspecified |
| scaffold14556 |
93421 |
93518 |
+ |
RS4475 |
Unspecified |
| scaffold14556 |
93812 |
93837 |
+ |
(AATA)n |
Simple_repeat |
| scaffold14556 |
94035 |
94143 |
+ |
(AAT)n |
Simple_repeat |
| scaffold14556 |
94441 |
94530 |
- |
RS3146 |
Unspecified |
| scaffold14556 |
95090 |
95332 |
- |
RS237 |
Unspecified |
| scaffold14556 |
95318 |
95539 |
- |
RS537 |
Unspecified |
| scaffold14556 |
95872 |
95933 |
+ |
A-rich |
Low_complexity |
| scaffold14556 |
96153 |
96422 |
+ |
RS1056 |
Unspecified |
| scaffold14556 |
96509 |
96575 |
- |
RS1347 |
Unspecified |
| scaffold14556 |
97398 |
97821 |
- |
RS58 |
Unspecified |
| scaffold14556 |
97807 |
97868 |
- |
RS617 |
Unspecified |
| scaffold14556 |
97809 |
97880 |
+ |
RS724 |
Unspecified |
| scaffold14556 |
97852 |
97899 |
- |
RS617 |
Unspecified |
| scaffold14556 |
98112 |
98169 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold14556 |
99176 |
99206 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
99208 |
99303 |
+ |
PL422 |
Unspecified |
| scaffold14556 |
99966 |
99998 |
+ |
(T)n |
Simple_repeat |
| scaffold14556 |
100183 |
100240 |
- |
SINE2-1_STu |
SINE/tRNA |
| scaffold14556 |
100334 |
100400 |
+ |
RS1334 |
Unspecified |