scaffold14604 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14604 |
1 |
103 |
+ |
PL20 |
Unspecified |
| scaffold14604 |
477 |
680 |
+ |
RS28 |
Unspecified |
| scaffold14604 |
993 |
1091 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold14604 |
1190 |
1682 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold14604 |
1866 |
2241 |
- |
L1-5_EPa |
LINE/L1 |
| scaffold14604 |
2531 |
3215 |
- |
ATLINE1_9 |
LINE/L1 |
| scaffold14604 |
3312 |
3328 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
3436 |
3720 |
- |
RS1857 |
Unspecified |
| scaffold14604 |
3879 |
3925 |
+ |
(AATTAT)n |
Simple_repeat |
| scaffold14604 |
3924 |
4113 |
+ |
A-rich |
Low_complexity |
| scaffold14604 |
4069 |
4113 |
+ |
A-rich |
Low_complexity |
| scaffold14604 |
4201 |
4401 |
- |
PL466 |
Unspecified |
| scaffold14604 |
4578 |
4742 |
- |
RS10787 |
Unspecified |
| scaffold14604 |
4720 |
4821 |
+ |
PL855 |
Unspecified |
| scaffold14604 |
4725 |
4814 |
+ |
PL661 |
Unspecified |
| scaffold14604 |
4935 |
5043 |
- |
L1-7_STu |
LINE/L1 |
| scaffold14604 |
6958 |
6997 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
7201 |
7225 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
8217 |
8248 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
11593 |
11662 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
12962 |
12999 |
+ |
(GCA)n |
Simple_repeat |
| scaffold14604 |
13369 |
13396 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
14184 |
15920 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold14604 |
18286 |
18315 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
18594 |
18793 |
- |
PL6 |
Unspecified |
| scaffold14604 |
18811 |
18897 |
+ |
RS18078 |
Unspecified |
| scaffold14604 |
19018 |
19056 |
+ |
A-rich |
Low_complexity |
| scaffold14604 |
19278 |
19343 |
+ |
RS13301 |
Unspecified |
| scaffold14604 |
19984 |
20004 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
20173 |
20203 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
20875 |
20929 |
+ |
(TACAT)n |
Simple_repeat |
| scaffold14604 |
21402 |
21428 |
+ |
(A)n |
Simple_repeat |
| scaffold14604 |
21658 |
21757 |
- |
RS6409 |
Unspecified |
| scaffold14604 |
21683 |
21757 |
+ |
RS12466 |
Unspecified |
| scaffold14604 |
21756 |
21921 |
+ |
PL204 |
Unspecified |
| scaffold14604 |
21923 |
22013 |
- |
RS463 |
Unspecified |
| scaffold14604 |
22023 |
22090 |
- |
RS6409 |
Unspecified |
| scaffold14604 |
22317 |
22365 |
- |
Copia10-VV_LTR |
LTR/Copia |
| scaffold14604 |
22465 |
23738 |
- |
RS60 |
Unspecified |
| scaffold14604 |
25106 |
25179 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold14604 |
27553 |
27705 |
+ |
RS10786 |
Unspecified |
| scaffold14604 |
27625 |
27764 |
+ |
PL249 |
Unspecified |
| scaffold14604 |
27835 |
27875 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
28512 |
28531 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
28703 |
28742 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
28962 |
29027 |
+ |
(TTGATTT)n |
Simple_repeat |
| scaffold14604 |
33764 |
33804 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold14604 |
34040 |
34095 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold14604 |
34358 |
34404 |
+ |
(ACTTTTT)n |
Simple_repeat |
| scaffold14604 |
35070 |
35167 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold14604 |
35754 |
35945 |
- |
RS10745 |
Unspecified |
| scaffold14604 |
36104 |
36122 |
+ |
(A)n |
Simple_repeat |
| scaffold14604 |
36701 |
36741 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold14604 |
36905 |
37328 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold14604 |
38063 |
38105 |
+ |
(A)n |
Simple_repeat |
| scaffold14604 |
42081 |
42162 |
- |
RS4281 |
Unspecified |
| scaffold14604 |
42124 |
42218 |
- |
RS2212 |
Unspecified |
| scaffold14604 |
42194 |
42275 |
- |
RS4281 |
Unspecified |
| scaffold14604 |
42237 |
42340 |
- |
RS2212 |
Unspecified |
| scaffold14604 |
42250 |
42524 |
- |
RS4281 |
Unspecified |
| scaffold14604 |
42534 |
42601 |
- |
Gypsy-194_ZM-I |
LTR/Gypsy |
| scaffold14604 |
42711 |
43883 |
- |
ltr_Roo |
ltr_Roo(TransposonPSI) |
| scaffold14604 |
42804 |
43583 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold14604 |
43945 |
45579 |
- |
Gypsy-36_BD-I |
LTR/Gypsy |
| scaffold14604 |
46759 |
46792 |
+ |
(GCTTCTC)n |
Simple_repeat |
| scaffold14604 |
48723 |
48750 |
+ |
(TCT)n |
Simple_repeat |
| scaffold14604 |
49525 |
49729 |
+ |
(TATG)n |
Simple_repeat |
| scaffold14604 |
49774 |
49807 |
+ |
(CTG)n |
Simple_repeat |
| scaffold14604 |
50215 |
50427 |
+ |
RS2931 |
Unspecified |
| scaffold14604 |
50215 |
50455 |
+ |
RS2931 |
Unspecified |
| scaffold14604 |
50394 |
51119 |
+ |
PL733 |
Unspecified |
| scaffold14604 |
51221 |
52128 |
- |
RS932 |
Unspecified |
| scaffold14604 |
51963 |
52188 |
- |
RS10268 |
Unspecified |
| scaffold14604 |
52189 |
52232 |
+ |
hAT-14N1_ZM |
DNA/hAT-Tip100 |
| scaffold14604 |
52314 |
52342 |
+ |
(A)n |
Simple_repeat |
| scaffold14604 |
53100 |
53125 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
53579 |
53645 |
+ |
(AACTTC)n |
Simple_repeat |
| scaffold14604 |
54665 |
54902 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold14604 |
55880 |
56151 |
+ |
RS1 |
Unspecified |
| scaffold14604 |
56355 |
56615 |
- |
RS365 |
Unspecified |
| scaffold14604 |
56962 |
57156 |
- |
RS2251 |
Unspecified |
| scaffold14604 |
57556 |
57656 |
+ |
RS16943 |
Unspecified |
| scaffold14604 |
57690 |
57794 |
+ |
RS14495 |
Unspecified |
| scaffold14604 |
57760 |
58110 |
- |
RS11939 |
Unspecified |
| scaffold14604 |
58213 |
58280 |
- |
RS11939 |
Unspecified |
| scaffold14604 |
59445 |
59771 |
+ |
RS2132 |
Unspecified |
| scaffold14604 |
59824 |
59891 |
- |
RS11939 |
Unspecified |
| scaffold14604 |
59989 |
60227 |
+ |
RS5099 |
Unspecified |
| scaffold14604 |
61003 |
61043 |
+ |
(ACACAC)n |
Simple_repeat |
| scaffold14604 |
65910 |
66240 |
- |
PL871 |
Unspecified |
| scaffold14604 |
66420 |
67185 |
- |
L1-1_PTr |
LINE/L1 |
| scaffold14604 |
70428 |
70583 |
+ |
(AATGA)n |
Simple_repeat |
| scaffold14604 |
70512 |
70583 |
+ |
(AATGA)n |
Simple_repeat |
| scaffold14604 |
71870 |
71933 |
- |
RS167 |
Unspecified |
| scaffold14604 |
71935 |
72211 |
+ |
RS970 |
Unspecified |
| scaffold14604 |
72376 |
72416 |
+ |
A-rich |
Low_complexity |
| scaffold14604 |
72520 |
72580 |
+ |
RS972 |
Unspecified |
| scaffold14604 |
72530 |
72580 |
+ |
RS9523 |
Unspecified |
| scaffold14604 |
72966 |
73011 |
+ |
RS18371 |
Unspecified |
| scaffold14604 |
72972 |
73031 |
- |
RS1854 |
Unspecified |
| scaffold14604 |
74025 |
74215 |
+ |
RS28 |
Unspecified |
| scaffold14604 |
76376 |
76420 |
+ |
A-rich |
Low_complexity |
| scaffold14604 |
78878 |
78922 |
- |
PL517 |
Unspecified |
| scaffold14604 |
79721 |
79753 |
+ |
(GGTGAT)n |
Simple_repeat |
| scaffold14604 |
79833 |
79860 |
+ |
(T)n |
Simple_repeat |
| scaffold14604 |
82428 |
82456 |
+ |
(CAA)n |
Simple_repeat |