scaffold14644 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold14644 |
1 |
260 |
+ |
RS30 |
Unspecified |
| scaffold14644 |
307 |
735 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14644 |
743 |
977 |
+ |
RS15131 |
Unspecified |
| scaffold14644 |
1029 |
1996 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14644 |
2090 |
3757 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold14644 |
2152 |
3702 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14644 |
4051 |
4187 |
+ |
COPI1_LTR |
LTR/Copia |
| scaffold14644 |
4324 |
4374 |
+ |
Copia-10_BD-I |
LTR/Copia |
| scaffold14644 |
6710 |
7239 |
- |
PL788 |
Unspecified |
| scaffold14644 |
9636 |
9795 |
- |
RS64 |
Unspecified |
| scaffold14644 |
10574 |
10604 |
+ |
(T)n |
Simple_repeat |
| scaffold14644 |
10896 |
11141 |
- |
RS402 |
Unspecified |
| scaffold14644 |
11146 |
12780 |
+ |
RS658 |
Unspecified |
| scaffold14644 |
12782 |
13280 |
+ |
Gypsy-135_GM-I |
LTR/Gypsy |
| scaffold14644 |
13598 |
13626 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold14644 |
13878 |
14234 |
- |
PL743 |
Unspecified |
| scaffold14644 |
14260 |
14329 |
+ |
(ATTTGT)n |
Simple_repeat |
| scaffold14644 |
14386 |
14408 |
+ |
(A)n |
Simple_repeat |
| scaffold14644 |
14843 |
15794 |
+ |
RS101 |
Unspecified |
| scaffold14644 |
15925 |
15999 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold14644 |
16030 |
16092 |
+ |
(TAT)n |
Simple_repeat |
| scaffold14644 |
17106 |
17163 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold14644 |
17185 |
17549 |
- |
RS3795 |
Unspecified |
| scaffold14644 |
17742 |
17767 |
+ |
(A)n |
Simple_repeat |
| scaffold14644 |
17830 |
17967 |
- |
RS241 |
Unspecified |
| scaffold14644 |
17983 |
18171 |
- |
RS1 |
Unspecified |
| scaffold14644 |
19695 |
19925 |
+ |
PL469 |
Unspecified |
| scaffold14644 |
22509 |
22561 |
+ |
(TCC)n |
Simple_repeat |
| scaffold14644 |
23127 |
23174 |
+ |
(TT)n |
Simple_repeat |
| scaffold14644 |
23175 |
23656 |
+ |
PL477 |
Unspecified |
| scaffold14644 |
24160 |
24273 |
- |
RS285 |
Unspecified |
| scaffold14644 |
25409 |
25435 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold14644 |
26710 |
26749 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold14644 |
27168 |
27208 |
+ |
A-rich |
Low_complexity |
| scaffold14644 |
27621 |
27658 |
+ |
(TAGAGA)n |
Simple_repeat |
| scaffold14644 |
29840 |
29877 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold14644 |
31070 |
31133 |
+ |
GA-rich |
Low_complexity |
| scaffold14644 |
31334 |
31368 |
+ |
(T)n |
Simple_repeat |
| scaffold14644 |
31398 |
31838 |
+ |
RS2429 |
Unspecified |
| scaffold14644 |
31799 |
32031 |
+ |
RS3295 |
Unspecified |
| scaffold14644 |
31830 |
32056 |
- |
RS3964 |
Unspecified |
| scaffold14644 |
32097 |
32719 |
+ |
RS1480 |
Unspecified |
| scaffold14644 |
32785 |
32851 |
- |
RS34 |
Unspecified |
| scaffold14644 |
32885 |
33032 |
- |
RS1115 |
Unspecified |
| scaffold14644 |
33080 |
33111 |
+ |
(T)n |
Simple_repeat |
| scaffold14644 |
33306 |
33342 |
+ |
(T)n |
Simple_repeat |
| scaffold14644 |
33679 |
33743 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold14644 |
34276 |
34598 |
- |
MTIS112A |
DNA/PIF-Harbinger |
| scaffold14644 |
35170 |
35213 |
+ |
A-rich |
Low_complexity |
| scaffold14644 |
35256 |
35430 |
- |
RS179 |
Unspecified |
| scaffold14644 |
36167 |
36298 |
+ |
RS522 |
Unspecified |
| scaffold14644 |
37896 |
38030 |
+ |
RS15847 |
Unspecified |
| scaffold14644 |
38140 |
38280 |
+ |
RS17099 |
Unspecified |
| scaffold14644 |
38318 |
38458 |
+ |
RS15750 |
Unspecified |
| scaffold14644 |
38462 |
38562 |
+ |
RS17746 |
Unspecified |
| scaffold14644 |
38657 |
38808 |
+ |
RS15577 |
Unspecified |
| scaffold14644 |
39019 |
39147 |
+ |
RS18120 |
Unspecified |
| scaffold14644 |
39668 |
39865 |
+ |
RS15365 |
Unspecified |
| scaffold14644 |
39909 |
40009 |
+ |
RS15619 |
Unspecified |
| scaffold14644 |
40106 |
40219 |
+ |
RS15120 |
Unspecified |
| scaffold14644 |
40522 |
40544 |
+ |
(A)n |
Simple_repeat |
| scaffold14644 |
40913 |
41017 |
- |
RS132 |
Unspecified |
| scaffold14644 |
42953 |
43053 |
+ |
RS18096 |
Unspecified |
| scaffold14644 |
44474 |
44608 |
+ |
RS15847 |
Unspecified |
| scaffold14644 |
44718 |
44858 |
+ |
RS17099 |
Unspecified |
| scaffold14644 |
44896 |
45036 |
+ |
RS15750 |
Unspecified |
| scaffold14644 |
45040 |
45140 |
+ |
RS17746 |
Unspecified |
| scaffold14644 |
45235 |
45386 |
+ |
RS15577 |
Unspecified |
| scaffold14644 |
45597 |
45725 |
+ |
RS18120 |
Unspecified |
| scaffold14644 |
46245 |
46442 |
+ |
RS15365 |
Unspecified |
| scaffold14644 |
46486 |
46586 |
+ |
RS15619 |
Unspecified |
| scaffold14644 |
46683 |
46796 |
+ |
RS15120 |
Unspecified |
| scaffold14644 |
47099 |
47121 |
+ |
(A)n |
Simple_repeat |
| scaffold14644 |
47490 |
47594 |
- |
RS132 |
Unspecified |
| scaffold14644 |
49530 |
49630 |
+ |
RS18096 |
Unspecified |
| scaffold14644 |
51721 |
51752 |
+ |
(ACCTA)n |
Simple_repeat |
| scaffold14644 |
53236 |
53269 |
+ |
A-rich |
Low_complexity |
| scaffold14644 |
53523 |
53547 |
+ |
(GTT)n |
Simple_repeat |
| scaffold14644 |
53638 |
53672 |
+ |
(ACC)n |
Simple_repeat |
| scaffold14644 |
54166 |
54223 |
+ |
RS458 |
Unspecified |
| scaffold14644 |
54447 |
54505 |
+ |
A-rich |
Low_complexity |
| scaffold14644 |
55389 |
55751 |
+ |
RS1919 |
Unspecified |
| scaffold14644 |
55453 |
55795 |
+ |
RS1919 |
Unspecified |
| scaffold14644 |
55710 |
55867 |
+ |
RS1919 |
Unspecified |
| scaffold14644 |
57547 |
57578 |
+ |
(AATTAG)n |
Simple_repeat |
| scaffold14644 |
57800 |
58233 |
- |
PL400 |
Unspecified |
| scaffold14644 |
58237 |
58302 |
+ |
(ATT)n |
Simple_repeat |
| scaffold14644 |
59467 |
59635 |
+ |
PL543 |
Unspecified |
| scaffold14644 |
61752 |
61806 |
+ |
GA-rich |
Low_complexity |
| scaffold14644 |
61971 |
61997 |
+ |
(ATA)n |
Simple_repeat |
| scaffold14644 |
62435 |
63139 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |