scaffold14955 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold14955 |
28 |
226 |
+ |
RAHAT |
DNA/hAT-Tip100 |
scaffold14955 |
239 |
308 |
- |
RS60 |
Unspecified |
scaffold14955 |
369 |
574 |
+ |
RAHAT |
DNA/hAT-Tip100 |
scaffold14955 |
632 |
721 |
+ |
HAT-11_Mad |
DNA/hAT-Tip100 |
scaffold14955 |
1000 |
1130 |
- |
SZ-25_LTR |
LTR/Copia |
scaffold14955 |
4393 |
4446 |
+ |
(ATGTT)n |
Simple_repeat |
scaffold14955 |
4864 |
5020 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
scaffold14955 |
5154 |
5968 |
- |
Gypsy-20_BRa-I |
LTR/Gypsy |
scaffold14955 |
6710 |
8058 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
scaffold14955 |
8329 |
8406 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
scaffold14955 |
10497 |
10594 |
- |
SZ-25_LTR |
LTR/Copia |
scaffold14955 |
11132 |
11333 |
+ |
hAT-4_PTr |
DNA/hAT-Tip100 |
scaffold14955 |
11424 |
11475 |
+ |
(TT)n |
Simple_repeat |
scaffold14955 |
11671 |
13257 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
scaffold14955 |
11671 |
11899 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
scaffold14955 |
11815 |
13257 |
+ |
RS245 |
Unspecified |
scaffold14955 |
13506 |
13767 |
+ |
RS109 |
Unspecified |
scaffold14955 |
13757 |
13933 |
- |
RS369 |
Unspecified |
scaffold14955 |
13933 |
14610 |
+ |
Copia-65_Mad-I |
LTR/Copia |
scaffold14955 |
15153 |
15206 |
+ |
(TA)n |
Simple_repeat |
scaffold14955 |
15503 |
15625 |
- |
RS3314 |
Unspecified |
scaffold14955 |
15584 |
15807 |
+ |
RS851 |
Unspecified |
scaffold14955 |
15658 |
15972 |
+ |
RS1431 |
Unspecified |
scaffold14955 |
16230 |
16284 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold14955 |
16374 |
16619 |
- |
RS16888 |
Unspecified |
scaffold14955 |
16671 |
16704 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
17076 |
17107 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
17849 |
17972 |
+ |
GA-rich |
Low_complexity |
scaffold14955 |
18728 |
18773 |
+ |
(TATGAA)n |
Simple_repeat |
scaffold14955 |
20338 |
20357 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
20395 |
20425 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
22904 |
22943 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
23821 |
23850 |
+ |
(ATTT)n |
Simple_repeat |
scaffold14955 |
26537 |
26555 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
27185 |
27372 |
+ |
RS522 |
Unspecified |
scaffold14955 |
27264 |
27418 |
+ |
RS6556 |
Unspecified |
scaffold14955 |
31175 |
31343 |
- |
RS503 |
Unspecified |
scaffold14955 |
31408 |
31845 |
- |
PL400 |
Unspecified |
scaffold14955 |
31864 |
31888 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
31888 |
31941 |
- |
RS1010 |
Unspecified |
scaffold14955 |
31960 |
31998 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
32135 |
32391 |
+ |
RS1 |
Unspecified |
scaffold14955 |
32534 |
32565 |
+ |
(TTAATT)n |
Simple_repeat |
scaffold14955 |
33159 |
33200 |
+ |
(A)n |
Simple_repeat |
scaffold14955 |
33219 |
33652 |
+ |
PL400 |
Unspecified |
scaffold14955 |
33717 |
33885 |
+ |
RS503 |
Unspecified |
scaffold14955 |
34311 |
34364 |
- |
LT1_EPa |
LTR? |
scaffold14955 |
35248 |
35290 |
+ |
(TGTACTT)n |
Simple_repeat |
scaffold14955 |
37473 |
37632 |
- |
RS6556 |
Unspecified |
scaffold14955 |
37750 |
37988 |
- |
RS15131 |
Unspecified |
scaffold14955 |
38473 |
38700 |
+ |
RS18 |
Unspecified |
scaffold14955 |
38845 |
38873 |
+ |
(A)n |
Simple_repeat |
scaffold14955 |
41464 |
41831 |
- |
RS1067 |
Unspecified |
scaffold14955 |
42681 |
42789 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold14955 |
42734 |
42789 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
scaffold14955 |
43506 |
43537 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
43593 |
43644 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
scaffold14955 |
43902 |
44044 |
- |
RS3382 |
Unspecified |
scaffold14955 |
44254 |
44294 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
scaffold14955 |
44552 |
44694 |
- |
RS3382 |
Unspecified |
scaffold14955 |
45757 |
45780 |
+ |
(T)n |
Simple_repeat |
scaffold14955 |
45862 |
45900 |
+ |
(AACTAA)n |
Simple_repeat |
scaffold14955 |
45911 |
45966 |
- |
Alfare1_I-int |
LTR/Copia? |
scaffold14955 |
46443 |
46599 |
- |
RS931 |
Unspecified |
scaffold14955 |
47383 |
47777 |
+ |
PL541 |
Unspecified |
scaffold14955 |
47929 |
47978 |
+ |
(TCTGCTC)n |
Simple_repeat |
scaffold14955 |
48734 |
48761 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
scaffold14955 |
48918 |
48954 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
49510 |
49545 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
49763 |
49957 |
- |
RS49 |
Unspecified |
scaffold14955 |
51176 |
51224 |
+ |
(TTGTTAA)n |
Simple_repeat |
scaffold14955 |
51771 |
51878 |
+ |
(GCATATAA)n |
Simple_repeat |
scaffold14955 |
51933 |
52700 |
- |
RS2725 |
Unspecified |
scaffold14955 |
51933 |
52950 |
- |
RS934 |
Unspecified |
scaffold14955 |
56147 |
56213 |
+ |
PL947 |
Unspecified |
scaffold14955 |
56214 |
56380 |
+ |
DS-RICE3N |
DNA/hAT-Ac |
scaffold14955 |
56391 |
56422 |
+ |
(TCGAGC)n |
Simple_repeat |
scaffold14955 |
56497 |
56553 |
+ |
(AATTTTT)n |
Simple_repeat |
scaffold14955 |
56580 |
56733 |
- |
hAT-N16_ZM |
DNA/hAT-Ac |
scaffold14955 |
57322 |
57429 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
scaffold14955 |
57496 |
58115 |
- |
PL909 |
Unspecified |
scaffold14955 |
58278 |
58346 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
58504 |
60381 |
+ |
gypsy |
gypsy(TransposonPSI) |
scaffold14955 |
58542 |
58587 |
+ |
Gypsy-14_SMo-I |
LTR/Gypsy |
scaffold14955 |
58561 |
59894 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
scaffold14955 |
60037 |
60181 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
scaffold14955 |
60699 |
61701 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
scaffold14955 |
61762 |
61831 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
scaffold14955 |
62264 |
63458 |
+ |
RS254 |
Unspecified |
scaffold14955 |
66507 |
66951 |
- |
RS374 |
Unspecified |
scaffold14955 |
66910 |
67168 |
- |
RS150 |
Unspecified |
scaffold14955 |
67169 |
67512 |
+ |
PL172 |
Unspecified |
scaffold14955 |
70756 |
70934 |
- |
ATHILA-1_SBi-I |
LTR/Gypsy |
scaffold14955 |
70992 |
71039 |
- |
Gypsy-39_PT-I |
LTR/Gypsy |
scaffold14955 |
71562 |
71588 |
- |
Gypsy-16_Mad-I |
LTR/Gypsy |
scaffold14955 |
74694 |
74730 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
75545 |
76341 |
- |
RS150 |
Unspecified |
scaffold14955 |
77765 |
79977 |
- |
RS150 |
Unspecified |
scaffold14955 |
79462 |
80340 |
+ |
RS672 |
Unspecified |
scaffold14955 |
81411 |
81586 |
- |
RS934 |
Unspecified |
scaffold14955 |
82596 |
82663 |
+ |
(TTTCAATA)n |
Simple_repeat |
scaffold14955 |
82876 |
83027 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
scaffold14955 |
83494 |
83538 |
+ |
(TTATTAA)n |
Simple_repeat |
scaffold14955 |
83821 |
83891 |
+ |
A-rich |
Low_complexity |
scaffold14955 |
84002 |
84044 |
+ |
(ATAAC)n |
Simple_repeat |
scaffold14955 |
84269 |
84330 |
+ |
(TAT)n |
Simple_repeat |
scaffold14955 |
84405 |
84737 |
- |
RS4686 |
Unspecified |
scaffold14955 |
85087 |
85120 |
+ |
(GTATTT)n |
Simple_repeat |
scaffold14955 |
86184 |
87574 |
- |
RS254 |
Unspecified |
scaffold14955 |
87572 |
87647 |
+ |
RS30 |
Unspecified |
scaffold14955 |
87648 |
88578 |
- |
RS420 |
Unspecified |
scaffold14955 |
87803 |
88833 |
- |
PL891 |
Unspecified |
scaffold14955 |
87987 |
89147 |
- |
PL405 |
Unspecified |
scaffold14955 |
89288 |
90692 |
+ |
RS260 |
Unspecified |
scaffold14955 |
90714 |
90760 |
+ |
(TTA)n |
Simple_repeat |
scaffold14955 |
90825 |
90862 |
+ |
(ATTATTT)n |
Simple_repeat |
scaffold14955 |
90934 |
91639 |
- |
PL475 |
Unspecified |
scaffold14955 |
92644 |
92676 |
+ |
(TTC)n |
Simple_repeat |
scaffold14955 |
93536 |
94937 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
scaffold14955 |
95171 |
95215 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
scaffold14955 |
98699 |
98744 |
+ |
Copia25-PTR_I-int |
LTR/Copia |