scaffold15020 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15020 |
1 |
119 |
+ |
PL827 |
Unspecified |
| scaffold15020 |
37 |
181 |
+ |
PL827 |
Unspecified |
| scaffold15020 |
66 |
219 |
+ |
RS48 |
Unspecified |
| scaffold15020 |
118 |
277 |
+ |
RS48 |
Unspecified |
| scaffold15020 |
176 |
334 |
+ |
RS48 |
Unspecified |
| scaffold15020 |
234 |
393 |
+ |
RS48 |
Unspecified |
| scaffold15020 |
1152 |
1199 |
+ |
(ATCCGAC)n |
Simple_repeat |
| scaffold15020 |
1342 |
1375 |
+ |
(TC)n |
Simple_repeat |
| scaffold15020 |
1812 |
1853 |
+ |
(ATT)n |
Simple_repeat |
| scaffold15020 |
2316 |
2356 |
+ |
(A)n |
Simple_repeat |
| scaffold15020 |
4265 |
4570 |
+ |
RS314 |
Unspecified |
| scaffold15020 |
4600 |
4651 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold15020 |
4814 |
4859 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold15020 |
5032 |
5086 |
+ |
RS17 |
Unspecified |
| scaffold15020 |
5163 |
5218 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold15020 |
5693 |
5739 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15020 |
6602 |
6633 |
+ |
(T)n |
Simple_repeat |
| scaffold15020 |
7273 |
7309 |
+ |
(A)n |
Simple_repeat |
| scaffold15020 |
7908 |
7939 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold15020 |
8731 |
8912 |
- |
RS178 |
Unspecified |
| scaffold15020 |
9092 |
9112 |
+ |
(A)n |
Simple_repeat |
| scaffold15020 |
10287 |
10406 |
- |
RS3241 |
Unspecified |
| scaffold15020 |
10408 |
10502 |
+ |
RS18358 |
Unspecified |
| scaffold15020 |
11078 |
11119 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold15020 |
11823 |
11896 |
+ |
(TAATTTT)n |
Simple_repeat |
| scaffold15020 |
12192 |
12534 |
- |
RS42 |
Unspecified |
| scaffold15020 |
12762 |
12807 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
13230 |
13304 |
+ |
(AT)n |
Simple_repeat |
| scaffold15020 |
14081 |
14332 |
+ |
RS17600 |
Unspecified |
| scaffold15020 |
14378 |
14437 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold15020 |
14462 |
14535 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold15020 |
15447 |
15540 |
- |
RS16382 |
Unspecified |
| scaffold15020 |
15890 |
16556 |
- |
RS95 |
Unspecified |
| scaffold15020 |
19175 |
20050 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold15020 |
21596 |
21646 |
+ |
(TAT)n |
Simple_repeat |
| scaffold15020 |
21793 |
21815 |
+ |
(TTA)n |
Simple_repeat |
| scaffold15020 |
21983 |
22031 |
+ |
(TATTTTA)n |
Simple_repeat |
| scaffold15020 |
22338 |
23149 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold15020 |
22338 |
22450 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold15020 |
22360 |
22467 |
+ |
(CAT)n |
Simple_repeat |
| scaffold15020 |
22360 |
23149 |
+ |
(CAT)n |
Simple_repeat |
| scaffold15020 |
22419 |
23149 |
+ |
PL439 |
Unspecified |
| scaffold15020 |
23846 |
23899 |
+ |
(TCATTTT)n |
Simple_repeat |
| scaffold15020 |
25903 |
25929 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold15020 |
26287 |
27135 |
+ |
RS6631 |
Unspecified |
| scaffold15020 |
28633 |
28677 |
+ |
(AACAAAC)n |
Simple_repeat |
| scaffold15020 |
28679 |
28685 |
+ |
(AACACA)n |
Simple_repeat |
| scaffold15020 |
28856 |
30655 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold15020 |
28881 |
30342 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold15020 |
30332 |
30486 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold15020 |
31028 |
32046 |
+ |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold15020 |
32113 |
32184 |
- |
PL888 |
Unspecified |
| scaffold15020 |
35067 |
35106 |
+ |
(TAATTAG)n |
Simple_repeat |
| scaffold15020 |
35124 |
36515 |
+ |
PL554 |
Unspecified |
| scaffold15020 |
36055 |
36870 |
+ |
PL921 |
Unspecified |
| scaffold15020 |
36282 |
37421 |
+ |
RS3063 |
Unspecified |
| scaffold15020 |
37445 |
38009 |
- |
RS2918 |
Unspecified |
| scaffold15020 |
38045 |
38074 |
+ |
(CCT)n |
Simple_repeat |
| scaffold15020 |
38337 |
38440 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold15020 |
41419 |
41592 |
+ |
PL522 |
Unspecified |
| scaffold15020 |
41584 |
41706 |
- |
RS9613 |
Unspecified |
| scaffold15020 |
41812 |
42029 |
+ |
Gypsy-32_PT-I |
LTR/Gypsy |
| scaffold15020 |
43279 |
43537 |
+ |
RS1 |
Unspecified |
| scaffold15020 |
43604 |
43835 |
- |
RS450 |
Unspecified |
| scaffold15020 |
44826 |
44855 |
+ |
(GTCGT)n |
Simple_repeat |
| scaffold15020 |
45242 |
45469 |
+ |
PL658 |
Unspecified |
| scaffold15020 |
45518 |
45589 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
45722 |
45789 |
- |
hAT-17N1_ZM |
DNA/hAT-Ac |
| scaffold15020 |
45908 |
45978 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
46385 |
46405 |
- |
hAT-17_ZM |
DNA/hAT-Ac |
| scaffold15020 |
46406 |
46494 |
+ |
JOUZHENA |
DNA/hAT-Ac |
| scaffold15020 |
46495 |
46568 |
- |
hAT-17_ZM |
DNA/hAT-Ac |
| scaffold15020 |
46559 |
46729 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold15020 |
46731 |
46951 |
- |
RS3984 |
Unspecified |
| scaffold15020 |
46962 |
47096 |
+ |
RS89 |
Unspecified |
| scaffold15020 |
47297 |
47357 |
+ |
RS2719 |
Unspecified |
| scaffold15020 |
47353 |
47458 |
- |
RS15113 |
Unspecified |
| scaffold15020 |
47448 |
47551 |
+ |
RS2719 |
Unspecified |
| scaffold15020 |
47631 |
47674 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
48195 |
48247 |
+ |
(TTTGG)n |
Simple_repeat |
| scaffold15020 |
48874 |
48909 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15020 |
50783 |
50818 |
+ |
(T)n |
Simple_repeat |
| scaffold15020 |
51930 |
51987 |
- |
LINE1-12_ZM |
LINE/L1 |
| scaffold15020 |
52213 |
52501 |
+ |
RS126 |
Unspecified |
| scaffold15020 |
53123 |
53192 |
- |
RS4949 |
Unspecified |
| scaffold15020 |
53228 |
53288 |
+ |
SINE2-1_STu |
SINE/tRNA |
| scaffold15020 |
53475 |
53502 |
+ |
(A)n |
Simple_repeat |
| scaffold15020 |
54124 |
54157 |
+ |
(TTACTAA)n |
Simple_repeat |
| scaffold15020 |
54425 |
54457 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
54734 |
54907 |
+ |
RS13061 |
Unspecified |
| scaffold15020 |
54904 |
55233 |
+ |
RS1920 |
Unspecified |
| scaffold15020 |
55337 |
55740 |
- |
PL223 |
Unspecified |
| scaffold15020 |
55851 |
55875 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold15020 |
57015 |
57175 |
- |
RS1704 |
Unspecified |
| scaffold15020 |
57033 |
57175 |
- |
RS1150 |
Unspecified |
| scaffold15020 |
57167 |
57304 |
+ |
RS1704 |
Unspecified |
| scaffold15020 |
57167 |
57286 |
+ |
RS1150 |
Unspecified |
| scaffold15020 |
57337 |
57615 |
+ |
PL942 |
Unspecified |
| scaffold15020 |
58887 |
58916 |
+ |
(ATT)n |
Simple_repeat |
| scaffold15020 |
58918 |
58946 |
+ |
(TTG)n |
Simple_repeat |
| scaffold15020 |
60360 |
60389 |
+ |
(ATT)n |
Simple_repeat |
| scaffold15020 |
60391 |
60425 |
+ |
(TTG)n |
Simple_repeat |
| scaffold15020 |
62429 |
62697 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold15020 |
62979 |
63062 |
- |
EnSpm-3_STu |
DNA/CMC-EnSpm |
| scaffold15020 |
63338 |
64367 |
+ |
RS1795 |
Unspecified |
| scaffold15020 |
64416 |
65086 |
+ |
RS1765 |
Unspecified |
| scaffold15020 |
64757 |
65215 |
+ |
RS1520 |
Unspecified |
| scaffold15020 |
65320 |
65343 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold15020 |
65344 |
65356 |
- |
EnSpm1n_AT |
DNA/CMC-EnSpm |
| scaffold15020 |
65357 |
65397 |
+ |
(TCT)n |
Simple_repeat |
| scaffold15020 |
65398 |
65427 |
+ |
ATCopia24I |
LTR/Copia |
| scaffold15020 |
65428 |
65438 |
- |
EnSpm1n_AT |
DNA/CMC-EnSpm |
| scaffold15020 |
65590 |
65843 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold15020 |
66182 |
66221 |
+ |
A-rich |
Low_complexity |
| scaffold15020 |
66441 |
66505 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold15020 |
66613 |
67460 |
- |
EnSpm-2_STu |
DNA/CMC-EnSpm |
| scaffold15020 |
67486 |
68982 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold15020 |
67539 |
68481 |
- |
EnSpm-6_STu |
DNA/CMC-EnSpm |
| scaffold15020 |
68985 |
69581 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold15020 |
69864 |
69977 |
- |
EnSpm-13_VV |
DNA/CMC-EnSpm |
| scaffold15020 |
70127 |
70293 |
+ |
(CAA)n |
Simple_repeat |
| scaffold15020 |
70306 |
70383 |
+ |
(ACA)n |
Simple_repeat |