scaffold15112 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15112 |
2260 |
2307 |
- |
Copia-61_GM-I |
LTR/Copia |
| scaffold15112 |
3393 |
3510 |
- |
PL196 |
Unspecified |
| scaffold15112 |
4616 |
4666 |
+ |
A-rich |
Low_complexity |
| scaffold15112 |
4719 |
5097 |
+ |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold15112 |
5240 |
5478 |
+ |
Gypsy-52_Mad-I |
LTR/Gypsy |
| scaffold15112 |
5543 |
5741 |
+ |
RTIP1_I-int |
LTR/Gypsy |
| scaffold15112 |
6035 |
6805 |
+ |
RTIP1_I-int |
LTR/Gypsy |
| scaffold15112 |
6982 |
7085 |
+ |
RTIP1_I-int |
LTR/Gypsy |
| scaffold15112 |
7176 |
7254 |
+ |
ATGP5LTR |
LTR/Gypsy |
| scaffold15112 |
7188 |
7257 |
+ |
Copia-90_Mad-I |
LTR/Copia |
| scaffold15112 |
9828 |
10111 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold15112 |
12452 |
12610 |
+ |
PL196 |
Unspecified |
| scaffold15112 |
13060 |
13153 |
- |
SZ-25_LTR |
LTR/Copia |
| scaffold15112 |
13958 |
13964 |
+ |
(CTTTG)n |
Simple_repeat |
| scaffold15112 |
13965 |
14016 |
+ |
(TTTC)n |
Simple_repeat |
| scaffold15112 |
16480 |
16534 |
+ |
(TATGT)n |
Simple_repeat |
| scaffold15112 |
16894 |
17093 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold15112 |
17227 |
17531 |
- |
Gypsy16-VV_I-int |
LTR/Gypsy |
| scaffold15112 |
17884 |
18023 |
- |
Gypsy-35_BD-I |
LTR/Gypsy |
| scaffold15112 |
18078 |
18479 |
- |
Gypsy-35_BD-I |
LTR/Gypsy |
| scaffold15112 |
21866 |
21992 |
- |
Copia-62_GM-LTR |
LTR/Copia |
| scaffold15112 |
22377 |
22433 |
+ |
(CCTGGA)n |
Simple_repeat |
| scaffold15112 |
22944 |
23010 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15112 |
23973 |
24000 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold15112 |
25706 |
25736 |
+ |
(TGCT)n |
Simple_repeat |
| scaffold15112 |
27458 |
27713 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold15112 |
27701 |
28738 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold15112 |
30252 |
30920 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold15112 |
30252 |
31148 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold15112 |
30824 |
31148 |
- |
PL816 |
Unspecified |
| scaffold15112 |
32710 |
32776 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15112 |
33665 |
33716 |
+ |
(ATGTGG)n |
Simple_repeat |
| scaffold15112 |
33846 |
33936 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold15112 |
34056 |
34120 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold15112 |
34099 |
34134 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold15112 |
34410 |
34590 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold15112 |
34604 |
34639 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold15112 |
34678 |
34718 |
+ |
(GATT)n |
Simple_repeat |
| scaffold15112 |
37279 |
37304 |
+ |
(A)n |
Simple_repeat |
| scaffold15112 |
37351 |
37400 |
+ |
A-rich |
Low_complexity |
| scaffold15112 |
37809 |
37883 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold15112 |
38850 |
38934 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15112 |
38947 |
39036 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold15112 |
39187 |
39486 |
- |
PL9 |
Unspecified |
| scaffold15112 |
44182 |
44228 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold15112 |
44461 |
44489 |
+ |
(GTGGTT)n |
Simple_repeat |
| scaffold15112 |
44640 |
44756 |
+ |
RS3422 |
Unspecified |
| scaffold15112 |
44676 |
44854 |
+ |
RS8495 |
Unspecified |
| scaffold15112 |
45289 |
45876 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold15112 |
45602 |
45660 |
- |
ATMU13 |
DNA/MULE-MuDR |
| scaffold15112 |
45935 |
46122 |
+ |
RS13257 |
Unspecified |
| scaffold15112 |
46862 |
47049 |
+ |
RS13257 |
Unspecified |
| scaffold15112 |
47709 |
47954 |
- |
RS3422 |
Unspecified |
| scaffold15112 |
48920 |
49054 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold15112 |
49644 |
49836 |
- |
RS16 |
Unspecified |
| scaffold15112 |
49933 |
49966 |
+ |
(GTTCT)n |
Simple_repeat |
| scaffold15112 |
50041 |
50691 |
+ |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold15112 |
50737 |
50888 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold15112 |
51274 |
52451 |
+ |
Gypsy3-VV_I-int |
LTR/Gypsy |
| scaffold15112 |
52792 |
52858 |
+ |
(CATAA)n |
Simple_repeat |
| scaffold15112 |
54164 |
54566 |
+ |
RS698 |
Unspecified |
| scaffold15112 |
55313 |
55421 |
+ |
(TCA)n |
Simple_repeat |
| scaffold15112 |
56626 |
56681 |
+ |
(TCCAGGA)n |
Simple_repeat |
| scaffold15112 |
57108 |
57283 |
+ |
RS698 |
Unspecified |
| scaffold15112 |
58992 |
59054 |
+ |
Atlantys1_I-int |
LTR/Gypsy |