scaffold15260 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15260 |
1 |
51 |
+ |
RS1323 |
Unspecified |
| scaffold15260 |
1135 |
1172 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15260 |
1308 |
1339 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold15260 |
1725 |
2319 |
- |
RIRE1_LTR |
LTR/Copia |
| scaffold15260 |
3088 |
3247 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold15260 |
3963 |
4035 |
- |
OARE1_I-int |
LTR/Copia |
| scaffold15260 |
4367 |
4584 |
+ |
Gypsy-118_GM-I |
LTR/Gypsy |
| scaffold15260 |
4690 |
4719 |
+ |
(GAATA)n |
Simple_repeat |
| scaffold15260 |
7058 |
7159 |
+ |
(AATTCAT)n |
Simple_repeat |
| scaffold15260 |
8504 |
8535 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold15260 |
12895 |
12932 |
+ |
(A)n |
Simple_repeat |
| scaffold15260 |
13653 |
13702 |
+ |
(TAAGAGG)n |
Simple_repeat |
| scaffold15260 |
15421 |
15464 |
+ |
RS421 |
Unspecified |
| scaffold15260 |
15902 |
15932 |
+ |
(A)n |
Simple_repeat |
| scaffold15260 |
16516 |
17494 |
+ |
PL544 |
Unspecified |
| scaffold15260 |
17739 |
17783 |
- |
RS6470 |
Unspecified |
| scaffold15260 |
17773 |
18066 |
- |
PL760 |
Unspecified |
| scaffold15260 |
18576 |
18686 |
+ |
RS5961 |
Unspecified |
| scaffold15260 |
19474 |
19502 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold15260 |
19579 |
19634 |
+ |
(AAC)n |
Simple_repeat |
| scaffold15260 |
21122 |
21217 |
+ |
MuDR-8_VV |
DNA/MULE-MuDR |
| scaffold15260 |
22243 |
22370 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold15260 |
24904 |
24945 |
+ |
(T)n |
Simple_repeat |
| scaffold15260 |
25244 |
25282 |
+ |
(AACT)n |
Simple_repeat |
| scaffold15260 |
25384 |
25421 |
+ |
(TTTTCTT)n |
Simple_repeat |
| scaffold15260 |
25586 |
25690 |
+ |
(AATTC)n |
Simple_repeat |
| scaffold15260 |
26020 |
26071 |
+ |
(T)n |
Simple_repeat |
| scaffold15260 |
26079 |
26141 |
+ |
(CAC)n |
Simple_repeat |
| scaffold15260 |
26151 |
26185 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold15260 |
26344 |
26481 |
- |
RS3637 |
Unspecified |
| scaffold15260 |
26717 |
26752 |
+ |
(GGT)n |
Simple_repeat |
| scaffold15260 |
26829 |
26919 |
- |
PL476 |
Unspecified |
| scaffold15260 |
26933 |
26995 |
- |
PL476 |
Unspecified |
| scaffold15260 |
26998 |
27055 |
+ |
RS750 |
Unspecified |
| scaffold15260 |
27057 |
27195 |
- |
PL476 |
Unspecified |
| scaffold15260 |
27211 |
27255 |
+ |
(ATT)n |
Simple_repeat |
| scaffold15260 |
27614 |
27906 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold15260 |
28511 |
28555 |
+ |
(ATAACT)n |
Simple_repeat |
| scaffold15260 |
28663 |
29611 |
+ |
PL526 |
Unspecified |
| scaffold15260 |
29061 |
29780 |
+ |
(AGGCGCCCT)n |
Simple_repeat |
| scaffold15260 |
29729 |
29780 |
+ |
(AGGCGCCCT)n |
Simple_repeat |
| scaffold15260 |
29944 |
29991 |
+ |
(TTGACT)n |
Simple_repeat |
| scaffold15260 |
30108 |
30169 |
- |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold15260 |
30672 |
30765 |
- |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold15260 |
30798 |
30874 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold15260 |
31270 |
31333 |
+ |
(CTCCCT)n |
Simple_repeat |
| scaffold15260 |
32957 |
33017 |
+ |
GA-rich |
Low_complexity |
| scaffold15260 |
33041 |
33114 |
- |
RS1026 |
Unspecified |
| scaffold15260 |
33143 |
33183 |
+ |
(TT)n |
Simple_repeat |
| scaffold15260 |
33648 |
33698 |
+ |
(AACT)n |
Simple_repeat |
| scaffold15260 |
33708 |
33862 |
- |
RS11629 |
Unspecified |
| scaffold15260 |
33748 |
34704 |
+ |
PL526 |
Unspecified |
| scaffold15260 |
34143 |
34873 |
+ |
(AGGCGCCCT)n |
Simple_repeat |
| scaffold15260 |
34822 |
34873 |
+ |
(AGGCGCCCT)n |
Simple_repeat |
| scaffold15260 |
35037 |
35084 |
+ |
(TTGACT)n |
Simple_repeat |
| scaffold15260 |
35726 |
35764 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
37044 |
37078 |
+ |
(ATTATTA)n |
Simple_repeat |
| scaffold15260 |
37078 |
37413 |
- |
cacta |
cacta(TransposonPSI) |
| scaffold15260 |
37507 |
37636 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
37736 |
37794 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
37926 |
37944 |
+ |
(T)n |
Simple_repeat |
| scaffold15260 |
38221 |
38287 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
38221 |
38513 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
38270 |
38513 |
+ |
RS2381 |
Unspecified |
| scaffold15260 |
38514 |
38560 |
- |
RS8311 |
Unspecified |
| scaffold15260 |
38913 |
38965 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
40313 |
41903 |
- |
Copia-12_Pru-I |
LTR/Copia |
| scaffold15260 |
42468 |
42567 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15260 |
42666 |
43388 |
- |
RS438 |
Unspecified |
| scaffold15260 |
43967 |
45611 |
+ |
(ACA)n |
Simple_repeat |
| scaffold15260 |
43967 |
44033 |
+ |
(ACA)n |
Simple_repeat |
| scaffold15260 |
44015 |
45611 |
+ |
RS211 |
Unspecified |
| scaffold15260 |
45787 |
46221 |
- |
Copia-44_ST-I |
LTR/Copia |
| scaffold15260 |
46273 |
46423 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold15260 |
47589 |
47987 |
- |
RS288 |
Unspecified |
| scaffold15260 |
48746 |
48780 |
+ |
(TTTTTC)n |
Simple_repeat |
| scaffold15260 |
50374 |
50686 |
+ |
RS9040 |
Unspecified |
| scaffold15260 |
50716 |
50859 |
- |
RS8034 |
Unspecified |
| scaffold15260 |
51697 |
51808 |
+ |
(TTG)n |
Simple_repeat |
| scaffold15260 |
52568 |
52812 |
- |
RS8595 |
Unspecified |
| scaffold15260 |
52823 |
53438 |
- |
RS8100 |
Unspecified |
| scaffold15260 |
53482 |
54031 |
- |
RS4324 |
Unspecified |
| scaffold15260 |
54038 |
54729 |
- |
RS8344 |
Unspecified |
| scaffold15260 |
55371 |
55764 |
- |
RS446 |
Unspecified |
| scaffold15260 |
56167 |
56340 |
- |
PL783 |
Unspecified |
| scaffold15260 |
56724 |
57671 |
- |
ATIS112A |
DNA/PIF-Harbinger |
| scaffold15260 |
58344 |
58407 |
+ |
A-rich |
Low_complexity |
| scaffold15260 |
58636 |
58672 |
+ |
(CTTCAT)n |
Simple_repeat |
| scaffold15260 |
60222 |
60461 |
+ |
PL154 |
Unspecified |
| scaffold15260 |
60462 |
60765 |
- |
RS446 |
Unspecified |
| scaffold15260 |
61257 |
61640 |
+ |
RS3292 |
Unspecified |