scaffold1530 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1530 |
1 |
90 |
- |
RS4680 |
Unspecified |
| scaffold1530 |
1444 |
1489 |
+ |
(TTTTATC)n |
Simple_repeat |
| scaffold1530 |
1505 |
1555 |
+ |
(TGTTAT)n |
Simple_repeat |
| scaffold1530 |
2074 |
2098 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold1530 |
2333 |
2369 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
2686 |
2718 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
3097 |
3158 |
- |
PL51 |
Unspecified |
| scaffold1530 |
3702 |
4296 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold1530 |
4233 |
4296 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold1530 |
4869 |
4932 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1530 |
4967 |
5013 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1530 |
5038 |
5137 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1530 |
5188 |
5277 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1530 |
5686 |
5713 |
+ |
(TACT)n |
Simple_repeat |
| scaffold1530 |
5904 |
5996 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold1530 |
6030 |
6379 |
- |
RS704 |
Unspecified |
| scaffold1530 |
6723 |
6759 |
+ |
(TTTTATTTT)n |
Simple_repeat |
| scaffold1530 |
7104 |
7201 |
+ |
RS86 |
Unspecified |
| scaffold1530 |
7210 |
7227 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
7325 |
7367 |
+ |
MuDR-5_VV |
DNA/MULE-MuDR |
| scaffold1530 |
7632 |
7662 |
+ |
(TA)n |
Simple_repeat |
| scaffold1530 |
8207 |
8232 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold1530 |
8575 |
8647 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold1530 |
8752 |
8798 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
8827 |
9002 |
- |
RS17860 |
Unspecified |
| scaffold1530 |
9057 |
9300 |
- |
RS4 |
Unspecified |
| scaffold1530 |
9499 |
9535 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1530 |
10367 |
10622 |
+ |
RS736 |
Unspecified |
| scaffold1530 |
10743 |
10778 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
10925 |
10982 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold1530 |
11624 |
11801 |
- |
RS5 |
Unspecified |
| scaffold1530 |
11827 |
11972 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1530 |
11973 |
12043 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1530 |
12203 |
12384 |
- |
RS79 |
Unspecified |
| scaffold1530 |
13794 |
13813 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
14456 |
14648 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1530 |
14649 |
14738 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1530 |
15562 |
15655 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold1530 |
16123 |
16269 |
- |
RS8202 |
Unspecified |
| scaffold1530 |
16306 |
16471 |
+ |
RS86 |
Unspecified |
| scaffold1530 |
16667 |
16693 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
16830 |
16864 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1530 |
17110 |
17170 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold1530 |
17595 |
18108 |
+ |
PL6 |
Unspecified |
| scaffold1530 |
18508 |
18556 |
+ |
GA-rich |
Low_complexity |
| scaffold1530 |
18871 |
18965 |
- |
RS16382 |
Unspecified |
| scaffold1530 |
19196 |
19237 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1530 |
19316 |
19498 |
- |
RS178 |
Unspecified |
| scaffold1530 |
19841 |
19894 |
+ |
(TCATTA)n |
Simple_repeat |
| scaffold1530 |
19921 |
19943 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1530 |
20599 |
20967 |
- |
RS614 |
Unspecified |
| scaffold1530 |
22072 |
22116 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
25223 |
25409 |
- |
RS3396 |
Unspecified |
| scaffold1530 |
25476 |
25764 |
- |
RS2365 |
Unspecified |
| scaffold1530 |
25743 |
26064 |
+ |
RS2166 |
Unspecified |
| scaffold1530 |
28129 |
28174 |
+ |
(ATACTG)n |
Simple_repeat |
| scaffold1530 |
30736 |
30826 |
- |
RS16382 |
Unspecified |
| scaffold1530 |
31416 |
31480 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1530 |
32642 |
32694 |
+ |
HAT-9_Mad |
DNA/hAT-Ac |
| scaffold1530 |
32735 |
32817 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold1530 |
33136 |
33257 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1530 |
33311 |
33363 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1530 |
33657 |
34146 |
- |
RS2276 |
Unspecified |
| scaffold1530 |
35977 |
36011 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold1530 |
36135 |
36172 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
36641 |
36676 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1530 |
36831 |
36950 |
- |
RS8 |
Unspecified |
| scaffold1530 |
37571 |
37605 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
38511 |
38554 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
39191 |
39209 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
39385 |
39422 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold1530 |
39817 |
39854 |
+ |
(AAG)n |
Simple_repeat |
| scaffold1530 |
39953 |
39987 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
40055 |
40092 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
40875 |
40912 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
41032 |
41066 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1530 |
41278 |
41306 |
+ |
(T)n |
Simple_repeat |
| scaffold1530 |
41411 |
41502 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1530 |
41508 |
41603 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1530 |
42415 |
42497 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
42415 |
42444 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
42433 |
42497 |
- |
RS37 |
Unspecified |
| scaffold1530 |
44665 |
44974 |
+ |
PL959 |
Unspecified |
| scaffold1530 |
46485 |
46736 |
+ |
RS932 |
Unspecified |
| scaffold1530 |
46728 |
46983 |
+ |
RS932 |
Unspecified |
| scaffold1530 |
50056 |
50081 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
50177 |
50219 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold1530 |
50774 |
50814 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold1530 |
51287 |
51309 |
+ |
(TG)n |
Simple_repeat |
| scaffold1530 |
51569 |
51606 |
+ |
(GATTA)n |
Simple_repeat |
| scaffold1530 |
52496 |
52646 |
+ |
RS792 |
Unspecified |
| scaffold1530 |
53037 |
53059 |
+ |
(T)n |
Simple_repeat |
| scaffold1530 |
53371 |
53419 |
+ |
PL201 |
Unspecified |
| scaffold1530 |
53379 |
53561 |
- |
RS9351 |
Unspecified |
| scaffold1530 |
53640 |
53699 |
+ |
RS439 |
Unspecified |
| scaffold1530 |
53704 |
53964 |
- |
RS365 |
Unspecified |
| scaffold1530 |
53961 |
54407 |
+ |
RS439 |
Unspecified |
| scaffold1530 |
54420 |
54460 |
- |
RS439 |
Unspecified |
| scaffold1530 |
54762 |
54810 |
+ |
PL201 |
Unspecified |
| scaffold1530 |
54770 |
54953 |
- |
RS9351 |
Unspecified |
| scaffold1530 |
55040 |
55180 |
- |
RS7806 |
Unspecified |
| scaffold1530 |
55326 |
55518 |
- |
RS1796 |
Unspecified |
| scaffold1530 |
55475 |
55543 |
+ |
RS12517 |
Unspecified |
| scaffold1530 |
64170 |
64267 |
+ |
RS782 |
Unspecified |
| scaffold1530 |
64658 |
64677 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1530 |
65514 |
65646 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold1530 |
65725 |
65827 |
+ |
RS1126 |
Unspecified |
| scaffold1530 |
66273 |
66342 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1530 |
66365 |
66390 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1530 |
66394 |
66423 |
+ |
(ATGAAG)n |
Simple_repeat |
| scaffold1530 |
66421 |
66445 |
+ |
(AG)n |
Simple_repeat |
| scaffold1530 |
66610 |
66645 |
+ |
(T)n |
Simple_repeat |
| scaffold1530 |
67406 |
67457 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
67850 |
67878 |
+ |
(TCG)n |
Simple_repeat |
| scaffold1530 |
70175 |
70283 |
- |
RS5293 |
Unspecified |
| scaffold1530 |
72601 |
72666 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold1530 |
72805 |
72844 |
+ |
(ATCCTTCC)n |
Simple_repeat |
| scaffold1530 |
74257 |
74722 |
+ |
RS35 |
Unspecified |
| scaffold1530 |
74990 |
75098 |
- |
RS38 |
Unspecified |
| scaffold1530 |
75097 |
75470 |
+ |
RS8 |
Unspecified |
| scaffold1530 |
75461 |
75527 |
- |
RS38 |
Unspecified |
| scaffold1530 |
76140 |
76233 |
- |
RS16382 |
Unspecified |
| scaffold1530 |
76538 |
76694 |
- |
RS38 |
Unspecified |
| scaffold1530 |
76900 |
76928 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold1530 |
77576 |
77599 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold1530 |
77636 |
77699 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold1530 |
81178 |
81346 |
- |
PL441 |
Unspecified |
| scaffold1530 |
81379 |
81451 |
+ |
STOWAWAY12_SB |
DNA/TcMar-Stowaway |
| scaffold1530 |
81634 |
82107 |
+ |
RS261 |
Unspecified |
| scaffold1530 |
82226 |
82285 |
+ |
(AATA)n |
Simple_repeat |
| scaffold1530 |
82875 |
83063 |
- |
RS5318 |
Unspecified |
| scaffold1530 |
83839 |
83862 |
+ |
(T)n |
Simple_repeat |
| scaffold1530 |
84249 |
84500 |
- |
RS4 |
Unspecified |
| scaffold1530 |
84971 |
85109 |
- |
PL422 |
Unspecified |
| scaffold1530 |
85399 |
85438 |
+ |
A-rich |
Low_complexity |
| scaffold1530 |
86714 |
86966 |
+ |
RS586 |
Unspecified |
| scaffold1530 |
87086 |
87126 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold1530 |
88281 |
88385 |
+ |
RS492 |
Unspecified |
| scaffold1530 |
88930 |
89000 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold1530 |
89055 |
89127 |
+ |
(CGTGC)n |
Simple_repeat |
| scaffold1530 |
89162 |
89245 |
+ |
RS492 |
Unspecified |
| scaffold1530 |
89263 |
89348 |
- |
RS9794 |
Unspecified |
| scaffold1530 |
89441 |
89583 |
- |
RS622 |
Unspecified |
| scaffold1530 |
91418 |
91523 |
+ |
RS16382 |
Unspecified |
| scaffold1530 |
91519 |
91591 |
- |
RS4475 |
Unspecified |
| scaffold1530 |
92324 |
94087 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1530 |
92331 |
93100 |
- |
Copia-79_Mad-I |
LTR/Copia |
| scaffold1530 |
93154 |
93188 |
+ |
(AACTAG)n |
Simple_repeat |
| scaffold1530 |
93331 |
93622 |
- |
Copia-79_Mad-I |
LTR/Copia |
| scaffold1530 |
93848 |
94663 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1530 |
94670 |
94817 |
- |
Copia-79_Mad-I |
LTR/Copia |
| scaffold1530 |
95208 |
95244 |
+ |
(TGA)n |
Simple_repeat |
| scaffold1530 |
95293 |
95327 |
+ |
(GAAT)n |
Simple_repeat |
| scaffold1530 |
95598 |
95649 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1530 |
96168 |
96265 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold1530 |
98612 |
98630 |
+ |
(A)n |
Simple_repeat |
| scaffold1530 |
98794 |
98818 |
+ |
(A)n |
Simple_repeat |