scaffold15685 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15685 |
5 |
72 |
+ |
RIRE1_LTR |
LTR/Copia |
| scaffold15685 |
708 |
754 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold15685 |
846 |
883 |
+ |
(CTTTTGT)n |
Simple_repeat |
| scaffold15685 |
1635 |
1733 |
+ |
Gypsy-29_PTr-LTR |
LTR/Gypsy |
| scaffold15685 |
2015 |
2044 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold15685 |
2023 |
2054 |
+ |
(TG)n |
Simple_repeat |
| scaffold15685 |
2491 |
2886 |
- |
RS2869 |
Unspecified |
| scaffold15685 |
2902 |
3497 |
- |
RS66 |
Unspecified |
| scaffold15685 |
3826 |
4104 |
- |
RS1943 |
Unspecified |
| scaffold15685 |
4167 |
4191 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold15685 |
4467 |
4531 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold15685 |
4544 |
5009 |
- |
RS1943 |
Unspecified |
| scaffold15685 |
4866 |
5093 |
- |
RS1582 |
Unspecified |
| scaffold15685 |
5095 |
5122 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
5123 |
5140 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold15685 |
5787 |
6028 |
+ |
RS4 |
Unspecified |
| scaffold15685 |
7009 |
7059 |
+ |
(TAT)n |
Simple_repeat |
| scaffold15685 |
8979 |
9002 |
+ |
(TAA)n |
Simple_repeat |
| scaffold15685 |
9489 |
9909 |
- |
PL385 |
Unspecified |
| scaffold15685 |
9994 |
10090 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15685 |
10245 |
10435 |
- |
RS13348 |
Unspecified |
| scaffold15685 |
10270 |
10467 |
+ |
RS757 |
Unspecified |
| scaffold15685 |
10609 |
10656 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
10779 |
10828 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
13643 |
13861 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold15685 |
13988 |
14153 |
- |
ATREP10A |
RC/Helitron |
| scaffold15685 |
14163 |
14286 |
+ |
(CCGAC)n |
Simple_repeat |
| scaffold15685 |
14461 |
14491 |
+ |
(CCGCC)n |
Simple_repeat |
| scaffold15685 |
14858 |
15062 |
+ |
RS799 |
Unspecified |
| scaffold15685 |
15438 |
15926 |
- |
RS7845 |
Unspecified |
| scaffold15685 |
15947 |
16182 |
- |
RS6057 |
Unspecified |
| scaffold15685 |
16799 |
16898 |
+ |
(CAA)n |
Simple_repeat |
| scaffold15685 |
17465 |
17670 |
+ |
RS7053 |
Unspecified |
| scaffold15685 |
18865 |
18912 |
+ |
(TGA)n |
Simple_repeat |
| scaffold15685 |
19039 |
19403 |
- |
RS6841 |
Unspecified |
| scaffold15685 |
19465 |
19909 |
- |
PL672 |
Unspecified |
| scaffold15685 |
20138 |
20160 |
+ |
(A)n |
Simple_repeat |
| scaffold15685 |
20166 |
20202 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
21034 |
21407 |
- |
RS2931 |
Unspecified |
| scaffold15685 |
22698 |
24000 |
+ |
RS12 |
Unspecified |
| scaffold15685 |
24038 |
24114 |
+ |
(TTTTGG)n |
Simple_repeat |
| scaffold15685 |
24230 |
24282 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold15685 |
25016 |
25109 |
+ |
(CATA)n |
Simple_repeat |
| scaffold15685 |
25519 |
25580 |
+ |
(CAT)n |
Simple_repeat |
| scaffold15685 |
26047 |
26066 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
26122 |
26263 |
- |
RS1170 |
Unspecified |
| scaffold15685 |
26857 |
27130 |
- |
RS1251 |
Unspecified |
| scaffold15685 |
27469 |
27555 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
28530 |
28581 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
28634 |
29395 |
- |
RS2699 |
Unspecified |
| scaffold15685 |
28895 |
29980 |
- |
RS646 |
Unspecified |
| scaffold15685 |
29981 |
30091 |
- |
RS646 |
Unspecified |
| scaffold15685 |
30932 |
31025 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15685 |
31833 |
31881 |
+ |
(TGTTTAT)n |
Simple_repeat |
| scaffold15685 |
32521 |
32542 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold15685 |
32754 |
32783 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
33127 |
33137 |
+ |
(TCTTTTA)n |
Simple_repeat |
| scaffold15685 |
33138 |
33159 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
33160 |
33166 |
+ |
(TCTTTTA)n |
Simple_repeat |
| scaffold15685 |
33306 |
33334 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold15685 |
34392 |
34450 |
+ |
Helitron-3_Mad |
RC/Helitron |
| scaffold15685 |
34725 |
34915 |
- |
RS11936 |
Unspecified |
| scaffold15685 |
34808 |
35032 |
+ |
RS4164 |
Unspecified |
| scaffold15685 |
35055 |
35098 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
35578 |
36089 |
+ |
RS458 |
Unspecified |
| scaffold15685 |
36202 |
36227 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
36344 |
36382 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
36776 |
36834 |
+ |
(TAT)n |
Simple_repeat |
| scaffold15685 |
37257 |
37297 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
37413 |
37515 |
+ |
PL277 |
Unspecified |
| scaffold15685 |
37425 |
37515 |
- |
RS283 |
Unspecified |
| scaffold15685 |
37528 |
37732 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold15685 |
37879 |
38067 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold15685 |
38081 |
38437 |
- |
RS283 |
Unspecified |
| scaffold15685 |
38469 |
38504 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
38542 |
38698 |
+ |
RS79 |
Unspecified |
| scaffold15685 |
38699 |
38795 |
+ |
RS79 |
Unspecified |
| scaffold15685 |
39351 |
39428 |
+ |
(TTTTCT)n |
Simple_repeat |
| scaffold15685 |
40372 |
40390 |
+ |
(A)n |
Simple_repeat |
| scaffold15685 |
40912 |
40935 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold15685 |
41339 |
41544 |
+ |
RS18405 |
Unspecified |
| scaffold15685 |
41339 |
41508 |
- |
RS16888 |
Unspecified |
| scaffold15685 |
43107 |
43136 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
45075 |
45116 |
+ |
(ATA)n |
Simple_repeat |
| scaffold15685 |
45745 |
45781 |
+ |
(A)n |
Simple_repeat |
| scaffold15685 |
46161 |
46443 |
- |
RS1239 |
Unspecified |
| scaffold15685 |
47051 |
47273 |
+ |
PL9 |
Unspecified |
| scaffold15685 |
48992 |
49119 |
- |
PL271 |
Unspecified |
| scaffold15685 |
48992 |
49103 |
- |
PL6 |
Unspecified |
| scaffold15685 |
50654 |
50690 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15685 |
51042 |
51068 |
+ |
(GTGCT)n |
Simple_repeat |
| scaffold15685 |
51773 |
51791 |
+ |
(A)n |
Simple_repeat |
| scaffold15685 |
52070 |
52168 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold15685 |
52236 |
52268 |
+ |
(CAT)n |
Simple_repeat |
| scaffold15685 |
53192 |
53509 |
+ |
(TTAACAA)n |
Simple_repeat |
| scaffold15685 |
53474 |
53509 |
+ |
(TTAACAA)n |
Simple_repeat |
| scaffold15685 |
54002 |
54091 |
+ |
A-rich |
Low_complexity |
| scaffold15685 |
54783 |
54980 |
+ |
RS324 |
Unspecified |
| scaffold15685 |
56527 |
56550 |
+ |
(A)n |
Simple_repeat |
| scaffold15685 |
57207 |
57330 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold15685 |
57569 |
57615 |
+ |
(T)n |
Simple_repeat |
| scaffold15685 |
57686 |
57734 |
- |
RS1718 |
Unspecified |