scaffold15741 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15741 |
28 |
201 |
- |
PL911 |
Unspecified |
| scaffold15741 |
200 |
510 |
+ |
RS799 |
Unspecified |
| scaffold15741 |
513 |
893 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold15741 |
888 |
1193 |
+ |
RS14110 |
Unspecified |
| scaffold15741 |
1201 |
1348 |
+ |
RS37 |
Unspecified |
| scaffold15741 |
1784 |
1829 |
+ |
(ACTCT)n |
Simple_repeat |
| scaffold15741 |
3285 |
3336 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold15741 |
3863 |
4300 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold15741 |
4221 |
4275 |
+ |
(GTTTTTA)n |
Simple_repeat |
| scaffold15741 |
4676 |
4874 |
- |
RS1829 |
Unspecified |
| scaffold15741 |
5591 |
5617 |
+ |
(T)n |
Simple_repeat |
| scaffold15741 |
6057 |
6080 |
+ |
(CTA)n |
Simple_repeat |
| scaffold15741 |
6927 |
6948 |
+ |
(AT)n |
Simple_repeat |
| scaffold15741 |
7433 |
7526 |
+ |
GA-rich |
Low_complexity |
| scaffold15741 |
7753 |
8005 |
+ |
RS193 |
Unspecified |
| scaffold15741 |
9655 |
9690 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
10863 |
12609 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold15741 |
12743 |
14232 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold15741 |
14286 |
14942 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold15741 |
14749 |
14887 |
- |
COP3_I_MT-int |
LTR/Copia |
| scaffold15741 |
16127 |
16380 |
- |
RS1149 |
Unspecified |
| scaffold15741 |
17136 |
17169 |
+ |
RS698 |
Unspecified |
| scaffold15741 |
17173 |
17209 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold15741 |
17359 |
17393 |
+ |
(TTGGT)n |
Simple_repeat |
| scaffold15741 |
17494 |
17703 |
+ |
RS1365 |
Unspecified |
| scaffold15741 |
18086 |
18729 |
+ |
RS644 |
Unspecified |
| scaffold15741 |
19976 |
20023 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
20748 |
20793 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold15741 |
21258 |
21655 |
+ |
PL436 |
Unspecified |
| scaffold15741 |
22142 |
22172 |
+ |
(AATTTT)n |
Simple_repeat |
| scaffold15741 |
23282 |
23381 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold15741 |
23406 |
23454 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold15741 |
24269 |
24316 |
- |
Gypsy-9_EPa-I |
LTR/Gypsy |
| scaffold15741 |
24930 |
25263 |
- |
Gypsy-33_VV-I |
LTR/Gypsy |
| scaffold15741 |
25600 |
26007 |
- |
RS326 |
Unspecified |
| scaffold15741 |
26005 |
28615 |
+ |
RS51 |
Unspecified |
| scaffold15741 |
27680 |
28837 |
- |
PL956 |
Unspecified |
| scaffold15741 |
29286 |
29315 |
+ |
GA-rich |
Low_complexity |
| scaffold15741 |
29969 |
30079 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold15741 |
32381 |
32452 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
32640 |
33986 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold15741 |
34080 |
34253 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold15741 |
34507 |
34811 |
+ |
PL901 |
Unspecified |
| scaffold15741 |
34811 |
35747 |
+ |
RS402 |
Unspecified |
| scaffold15741 |
35862 |
36138 |
+ |
RS2915 |
Unspecified |
| scaffold15741 |
36034 |
36773 |
+ |
RS3578 |
Unspecified |
| scaffold15741 |
36783 |
36846 |
+ |
(T)n |
Simple_repeat |
| scaffold15741 |
37002 |
37235 |
+ |
RS2531 |
Unspecified |
| scaffold15741 |
37160 |
37415 |
+ |
RS3199 |
Unspecified |
| scaffold15741 |
37338 |
37612 |
- |
RS3283 |
Unspecified |
| scaffold15741 |
38088 |
38175 |
+ |
(GGT)n |
Simple_repeat |
| scaffold15741 |
38186 |
38220 |
+ |
(CT)n |
Simple_repeat |
| scaffold15741 |
38424 |
38453 |
+ |
(T)n |
Simple_repeat |
| scaffold15741 |
38541 |
38574 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
38585 |
39069 |
+ |
RS402 |
Unspecified |
| scaffold15741 |
40067 |
40243 |
+ |
RS2915 |
Unspecified |
| scaffold15741 |
40230 |
40905 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold15741 |
40948 |
41175 |
+ |
Gypsy-26_VV-I |
LTR/Gypsy |
| scaffold15741 |
41250 |
42749 |
- |
PL888 |
Unspecified |
| scaffold15741 |
41810 |
43249 |
+ |
PL554 |
Unspecified |
| scaffold15741 |
42787 |
43577 |
+ |
PL921 |
Unspecified |
| scaffold15741 |
43016 |
44159 |
+ |
RS3063 |
Unspecified |
| scaffold15741 |
44111 |
45886 |
- |
RS2918 |
Unspecified |
| scaffold15741 |
46198 |
46250 |
+ |
(CTCACAA)n |
Simple_repeat |
| scaffold15741 |
46359 |
46435 |
+ |
(CAC)n |
Simple_repeat |
| scaffold15741 |
46891 |
47233 |
- |
RS7566 |
Unspecified |
| scaffold15741 |
48395 |
48441 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold15741 |
49481 |
49512 |
+ |
(T)n |
Simple_repeat |
| scaffold15741 |
51543 |
53726 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold15741 |
51825 |
51966 |
+ |
L1-2_STu |
LINE/L1 |
| scaffold15741 |
52309 |
52383 |
+ |
SHALINE2_MT |
LINE/L1 |
| scaffold15741 |
52579 |
52861 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold15741 |
52831 |
53572 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold15741 |
53778 |
53918 |
+ |
L1-22_CPa |
LINE/L1 |
| scaffold15741 |
54950 |
54967 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
54968 |
54978 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold15741 |
54979 |
55006 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
55007 |
55022 |
+ |
(AATATA)n |
Simple_repeat |
| scaffold15741 |
55316 |
55554 |
- |
PL229 |
Unspecified |
| scaffold15741 |
56835 |
56895 |
+ |
RS526 |
Unspecified |
| scaffold15741 |
58460 |
58504 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
61985 |
62016 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
62174 |
62248 |
+ |
(TATC)n |
Simple_repeat |
| scaffold15741 |
62216 |
62248 |
+ |
(TATC)n |
Simple_repeat |
| scaffold15741 |
62753 |
62798 |
+ |
(TACTA)n |
Simple_repeat |
| scaffold15741 |
62838 |
63150 |
+ |
RS2794 |
Unspecified |
| scaffold15741 |
63481 |
63705 |
- |
RS10532 |
Unspecified |
| scaffold15741 |
63707 |
63916 |
+ |
RS4498 |
Unspecified |
| scaffold15741 |
64447 |
64486 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
64489 |
64519 |
+ |
(T)n |
Simple_repeat |
| scaffold15741 |
65223 |
65506 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold15741 |
66626 |
67091 |
+ |
RS1210 |
Unspecified |
| scaffold15741 |
67502 |
67574 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
67827 |
67869 |
+ |
(ACTATA)n |
Simple_repeat |
| scaffold15741 |
68294 |
68322 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
69088 |
69153 |
+ |
(GTGTT)n |
Simple_repeat |
| scaffold15741 |
69401 |
69444 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
69967 |
70196 |
- |
PL920 |
Unspecified |
| scaffold15741 |
71215 |
71692 |
- |
RS3216 |
Unspecified |
| scaffold15741 |
71928 |
71982 |
+ |
(ATTAC)n |
Simple_repeat |
| scaffold15741 |
72003 |
72984 |
- |
RS1447 |
Unspecified |
| scaffold15741 |
73309 |
73397 |
+ |
(GCAACGA)n |
Simple_repeat |
| scaffold15741 |
74363 |
74402 |
+ |
(ATTC)n |
Simple_repeat |
| scaffold15741 |
74697 |
74788 |
- |
RS488 |
Unspecified |
| scaffold15741 |
74969 |
74993 |
+ |
(GT)n |
Simple_repeat |
| scaffold15741 |
75152 |
75171 |
+ |
(TTG)n |
Simple_repeat |
| scaffold15741 |
76119 |
76781 |
- |
PL816 |
Unspecified |
| scaffold15741 |
76878 |
76929 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold15741 |
77051 |
77503 |
+ |
RS226 |
Unspecified |
| scaffold15741 |
77998 |
78035 |
+ |
A-rich |
Low_complexity |
| scaffold15741 |
79703 |
79782 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold15741 |
79754 |
79798 |
+ |
(TATACT)n |
Simple_repeat |
| scaffold15741 |
80385 |
80937 |
+ |
LINE1I_MT |
LINE/L1 |
| scaffold15741 |
82778 |
82864 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15741 |
82868 |
83220 |
- |
PL714 |
Unspecified |
| scaffold15741 |
83209 |
83526 |
+ |
RS535 |
Unspecified |