scaffold15970 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold15970 |
1 |
171 |
- |
RS5557 |
Unspecified |
scaffold15970 |
263 |
381 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold15970 |
431 |
535 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold15970 |
563 |
726 |
- |
RS11508 |
Unspecified |
scaffold15970 |
1282 |
1731 |
- |
RS3522 |
Unspecified |
scaffold15970 |
1496 |
1769 |
- |
RS6736 |
Unspecified |
scaffold15970 |
3291 |
3312 |
+ |
(A)n |
Simple_repeat |
scaffold15970 |
3291 |
3387 |
+ |
(A)n |
Simple_repeat |
scaffold15970 |
3305 |
3387 |
- |
RS6152 |
Unspecified |
scaffold15970 |
3432 |
3972 |
- |
PL476 |
Unspecified |
scaffold15970 |
4590 |
4651 |
+ |
(TTAGTAT)n |
Simple_repeat |
scaffold15970 |
4679 |
4696 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
5244 |
5274 |
+ |
(ATTTT)n |
Simple_repeat |
scaffold15970 |
5602 |
5630 |
+ |
(AGAC)n |
Simple_repeat |
scaffold15970 |
5878 |
5924 |
+ |
(ATT)n |
Simple_repeat |
scaffold15970 |
6372 |
6393 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
6486 |
6525 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
6760 |
6887 |
+ |
PL480 |
Unspecified |
scaffold15970 |
6777 |
6891 |
- |
RS665 |
Unspecified |
scaffold15970 |
6970 |
7005 |
+ |
(TAGAT)n |
Simple_repeat |
scaffold15970 |
7009 |
7048 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
7170 |
7206 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
7780 |
8273 |
- |
RS6525 |
Unspecified |
scaffold15970 |
8272 |
8343 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
9066 |
9262 |
- |
RS2570 |
Unspecified |
scaffold15970 |
9112 |
9190 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
9263 |
9439 |
+ |
RS371 |
Unspecified |
scaffold15970 |
9439 |
9834 |
- |
RS2570 |
Unspecified |
scaffold15970 |
12541 |
12706 |
- |
RS2570 |
Unspecified |
scaffold15970 |
12710 |
12750 |
- |
RS2570 |
Unspecified |
scaffold15970 |
12747 |
12908 |
- |
RS8829 |
Unspecified |
scaffold15970 |
15625 |
15653 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
15894 |
16046 |
- |
RS4757 |
Unspecified |
scaffold15970 |
16672 |
16705 |
+ |
(TTTTTG)n |
Simple_repeat |
scaffold15970 |
16706 |
17065 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
16706 |
16726 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
16717 |
17065 |
+ |
RS6139 |
Unspecified |
scaffold15970 |
17714 |
18874 |
- |
LINE |
LINE(TransposonPSI) |
scaffold15970 |
19098 |
19225 |
+ |
RS94 |
Unspecified |
scaffold15970 |
20649 |
21082 |
- |
RS3615 |
Unspecified |
scaffold15970 |
21081 |
21313 |
+ |
PL883 |
Unspecified |
scaffold15970 |
21316 |
21696 |
- |
Copia-4_GM-I |
LTR/Copia |
scaffold15970 |
21708 |
23505 |
- |
Copia-4_GM-I |
LTR/Copia |
scaffold15970 |
24906 |
26747 |
- |
Copia-4_GM-I |
LTR/Copia |
scaffold15970 |
26804 |
27313 |
- |
RS7618 |
Unspecified |
scaffold15970 |
27002 |
27624 |
+ |
PL883 |
Unspecified |
scaffold15970 |
27641 |
27926 |
- |
RS5557 |
Unspecified |
scaffold15970 |
28000 |
28080 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold15970 |
28143 |
28206 |
+ |
(TTCAG)n |
Simple_repeat |
scaffold15970 |
28235 |
28397 |
- |
RS11508 |
Unspecified |
scaffold15970 |
29128 |
29304 |
+ |
PL635 |
Unspecified |
scaffold15970 |
29305 |
29408 |
+ |
RS1763 |
Unspecified |
scaffold15970 |
29821 |
30063 |
- |
PL371 |
Unspecified |
scaffold15970 |
30114 |
30565 |
- |
RS3522 |
Unspecified |
scaffold15970 |
30328 |
30605 |
- |
RS6736 |
Unspecified |
scaffold15970 |
32117 |
32361 |
- |
RS5430 |
Unspecified |
scaffold15970 |
32374 |
33010 |
+ |
RS1980 |
Unspecified |
scaffold15970 |
32893 |
33149 |
+ |
RS2486 |
Unspecified |
scaffold15970 |
33338 |
33383 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
33442 |
33498 |
- |
RS15010 |
Unspecified |
scaffold15970 |
33533 |
33564 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
33976 |
34272 |
+ |
RS1085 |
Unspecified |
scaffold15970 |
34276 |
34412 |
- |
RS6152 |
Unspecified |
scaffold15970 |
34591 |
35158 |
+ |
PL782 |
Unspecified |
scaffold15970 |
36226 |
36643 |
- |
RS2570 |
Unspecified |
scaffold15970 |
36388 |
36715 |
+ |
RS10497 |
Unspecified |
scaffold15970 |
37145 |
37276 |
+ |
RS6465 |
Unspecified |
scaffold15970 |
40111 |
40291 |
- |
RS11720 |
Unspecified |
scaffold15970 |
40766 |
40911 |
- |
RS2570 |
Unspecified |
scaffold15970 |
40983 |
41030 |
+ |
(GTTTTAT)n |
Simple_repeat |
scaffold15970 |
41254 |
41320 |
- |
RS512 |
Unspecified |
scaffold15970 |
41453 |
41607 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
41577 |
41607 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
42072 |
42187 |
- |
RS3522 |
Unspecified |
scaffold15970 |
42190 |
42943 |
- |
RS604 |
Unspecified |
scaffold15970 |
42450 |
43011 |
+ |
PL781 |
Unspecified |
scaffold15970 |
42840 |
43035 |
- |
RS604 |
Unspecified |
scaffold15970 |
42900 |
43054 |
+ |
RS62 |
Unspecified |
scaffold15970 |
42918 |
43081 |
+ |
PL781 |
Unspecified |
scaffold15970 |
42940 |
43105 |
+ |
PL781 |
Unspecified |
scaffold15970 |
43036 |
43171 |
+ |
RS2364 |
Unspecified |
scaffold15970 |
43225 |
43253 |
+ |
(CATT)n |
Simple_repeat |
scaffold15970 |
43698 |
43739 |
+ |
(CAG)n |
Simple_repeat |
scaffold15970 |
43775 |
43884 |
+ |
(CA)n |
Simple_repeat |
scaffold15970 |
44271 |
44350 |
+ |
(TGA)n |
Simple_repeat |
scaffold15970 |
44469 |
44531 |
+ |
(TTA)n |
Simple_repeat |
scaffold15970 |
44624 |
44943 |
- |
RS3522 |
Unspecified |
scaffold15970 |
44651 |
44983 |
- |
RS6736 |
Unspecified |
scaffold15970 |
46737 |
46822 |
- |
RS6152 |
Unspecified |
scaffold15970 |
46871 |
46903 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
47962 |
48595 |
- |
RS2570 |
Unspecified |
scaffold15970 |
48452 |
48613 |
- |
RS8829 |
Unspecified |
scaffold15970 |
49989 |
50016 |
+ |
(TTGGG)n |
Simple_repeat |
scaffold15970 |
50086 |
50137 |
+ |
RS617 |
Unspecified |
scaffold15970 |
50132 |
50318 |
+ |
RS617 |
Unspecified |
scaffold15970 |
50319 |
50352 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
50596 |
50729 |
- |
RS2530 |
Unspecified |
scaffold15970 |
51049 |
51150 |
- |
RS12696 |
Unspecified |
scaffold15970 |
51347 |
51384 |
+ |
(ATCAATT)n |
Simple_repeat |
scaffold15970 |
51394 |
53039 |
- |
Copia-31_GM-I |
LTR/Copia |
scaffold15970 |
53489 |
54622 |
- |
Copia-31_GM-I |
LTR/Copia |
scaffold15970 |
54934 |
55188 |
- |
Copia-31_GM-I |
LTR/Copia |
scaffold15970 |
54976 |
55188 |
- |
Copia-31_GM-I |
LTR/Copia |
scaffold15970 |
55189 |
55261 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold15970 |
55935 |
56062 |
- |
RS1049 |
Unspecified |
scaffold15970 |
58105 |
58136 |
+ |
(AATAA)n |
Simple_repeat |
scaffold15970 |
58791 |
58852 |
+ |
(AATATG)n |
Simple_repeat |
scaffold15970 |
58853 |
58880 |
+ |
(T)n |
Simple_repeat |
scaffold15970 |
58900 |
58956 |
+ |
(ATGATA)n |
Simple_repeat |
scaffold15970 |
59062 |
59179 |
+ |
RS10497 |
Unspecified |
scaffold15970 |
59062 |
59151 |
- |
RS2570 |
Unspecified |
scaffold15970 |
59329 |
59465 |
+ |
RS5557 |
Unspecified |
scaffold15970 |
59679 |
59915 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold15970 |
59916 |
59988 |
- |
Copia-3_PTri-I |
LTR/Copia |
scaffold15970 |
60888 |
61049 |
+ |
RS2920 |
Unspecified |
scaffold15970 |
61185 |
61236 |
+ |
PL169 |
Unspecified |
scaffold15970 |
61185 |
61228 |
- |
RS13394 |
Unspecified |
scaffold15970 |
61263 |
61297 |
+ |
(TTTTAA)n |
Simple_repeat |
scaffold15970 |
61451 |
61867 |
- |
RS743 |
Unspecified |
scaffold15970 |
61860 |
62297 |
+ |
RS1683 |
Unspecified |
scaffold15970 |
63173 |
63226 |
+ |
RS735 |
Unspecified |
scaffold15970 |
63229 |
63339 |
- |
RS4384 |
Unspecified |
scaffold15970 |
63566 |
63601 |
+ |
(ATTTAA)n |
Simple_repeat |
scaffold15970 |
63664 |
63785 |
- |
RS5593 |
Unspecified |
scaffold15970 |
63950 |
64017 |
+ |
Copia-24_ST-I |
LTR/Copia |
scaffold15970 |
64389 |
64527 |
+ |
Copia-24_ST-I |
LTR/Copia |
scaffold15970 |
64695 |
65019 |
- |
RS2862 |
Unspecified |
scaffold15970 |
67754 |
68965 |
+ |
RS23 |
Unspecified |
scaffold15970 |
68389 |
69235 |
+ |
PL706 |
Unspecified |
scaffold15970 |
69046 |
69294 |
+ |
RS2187 |
Unspecified |
scaffold15970 |
75101 |
75266 |
+ |
RS359 |
Unspecified |
scaffold15970 |
75886 |
76214 |
- |
RS2862 |
Unspecified |
scaffold15970 |
76091 |
77482 |
- |
RS408 |
Unspecified |
scaffold15970 |
77824 |
77892 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold15970 |
78307 |
79157 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold15970 |
79530 |
81083 |
+ |
Copia-16_CP-I |
LTR/Copia |
scaffold15970 |
81161 |
81322 |
+ |
RS2920 |
Unspecified |
scaffold15970 |
82524 |
82559 |
+ |
(AGCTGC)n |
Simple_repeat |
scaffold15970 |
82608 |
82645 |
+ |
(AAC)n |
Simple_repeat |
scaffold15970 |
83109 |
83169 |
+ |
(AACTC)n |
Simple_repeat |
scaffold15970 |
83512 |
83638 |
- |
RS11268 |
Unspecified |
scaffold15970 |
83870 |
83906 |
+ |
(A)n |
Simple_repeat |
scaffold15970 |
86330 |
86382 |
+ |
(ATATAG)n |
Simple_repeat |
scaffold15970 |
86465 |
86716 |
- |
RS283 |
Unspecified |
scaffold15970 |
88121 |
88184 |
+ |
RS10284 |
Unspecified |
scaffold15970 |
88182 |
88217 |
+ |
(ACCAGG)n |
Simple_repeat |
scaffold15970 |
88371 |
88426 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
88453 |
88652 |
+ |
RS3649 |
Unspecified |
scaffold15970 |
89455 |
89632 |
- |
RS283 |
Unspecified |
scaffold15970 |
89823 |
89885 |
+ |
(TTGTTTA)n |
Simple_repeat |
scaffold15970 |
90074 |
90117 |
+ |
(TTA)n |
Simple_repeat |
scaffold15970 |
90808 |
90864 |
+ |
PL942 |
Unspecified |
scaffold15970 |
90965 |
91016 |
+ |
(AAT)n |
Simple_repeat |
scaffold15970 |
93905 |
94216 |
- |
RS2570 |
Unspecified |
scaffold15970 |
94249 |
94388 |
- |
RS2570 |
Unspecified |
scaffold15970 |
95201 |
95343 |
+ |
RS8572 |
Unspecified |
scaffold15970 |
95282 |
95383 |
+ |
RS11636 |
Unspecified |
scaffold15970 |
96788 |
96894 |
- |
RS1884 |
Unspecified |
scaffold15970 |
96820 |
97070 |
- |
RS9495 |
Unspecified |
scaffold15970 |
97124 |
98151 |
- |
Copia-40_ST-I |
LTR/Copia |
scaffold15970 |
98594 |
99488 |
- |
Copia-51_ST-I |
LTR/Copia |
scaffold15970 |
99551 |
99921 |
- |
Copia-51_ST-I |
LTR/Copia |
scaffold15970 |
100316 |
101017 |
- |
Copia-51_ST-I |
LTR/Copia |
scaffold15970 |
101174 |
101220 |
+ |
A-rich |
Low_complexity |
scaffold15970 |
101394 |
101500 |
- |
RS1884 |
Unspecified |
scaffold15970 |
101426 |
101674 |
- |
RS9495 |
Unspecified |
scaffold15970 |
102710 |
102879 |
- |
RS6308 |
Unspecified |