scaffold15986 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold15986 |
200 |
285 |
+ |
COP14_I_MT-int |
LTR/Copia |
| scaffold15986 |
286 |
343 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold15986 |
796 |
838 |
+ |
(ATAAC)n |
Simple_repeat |
| scaffold15986 |
847 |
888 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
1179 |
1226 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15986 |
1640 |
1985 |
- |
RS1963 |
Unspecified |
| scaffold15986 |
2891 |
2920 |
+ |
(TG)n |
Simple_repeat |
| scaffold15986 |
3867 |
3925 |
+ |
RS4623 |
Unspecified |
| scaffold15986 |
4454 |
4481 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold15986 |
4845 |
4882 |
+ |
(GATGAA)n |
Simple_repeat |
| scaffold15986 |
4957 |
5002 |
+ |
(TAG)n |
Simple_repeat |
| scaffold15986 |
5159 |
5560 |
+ |
RS1834 |
Unspecified |
| scaffold15986 |
5884 |
6808 |
+ |
(TG)n |
Simple_repeat |
| scaffold15986 |
6730 |
6808 |
+ |
(TG)n |
Simple_repeat |
| scaffold15986 |
7266 |
7350 |
+ |
(TG)n |
Simple_repeat |
| scaffold15986 |
8420 |
8451 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
9292 |
9315 |
+ |
(TA)n |
Simple_repeat |
| scaffold15986 |
10733 |
10785 |
+ |
(TTTGTAA)n |
Simple_repeat |
| scaffold15986 |
11116 |
11154 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold15986 |
11159 |
11234 |
+ |
(TT)n |
Simple_repeat |
| scaffold15986 |
11364 |
11422 |
+ |
(TTTCTAC)n |
Simple_repeat |
| scaffold15986 |
13105 |
13287 |
- |
Copia-35_GM-LTR |
LTR/Copia |
| scaffold15986 |
13384 |
13544 |
- |
RS3533 |
Unspecified |
| scaffold15986 |
13572 |
13867 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold15986 |
13860 |
13867 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold15986 |
13868 |
13902 |
+ |
(TA)n |
Simple_repeat |
| scaffold15986 |
13923 |
14020 |
- |
RS2464 |
Unspecified |
| scaffold15986 |
14207 |
14255 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold15986 |
14326 |
14354 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold15986 |
14859 |
14893 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
15370 |
16091 |
- |
RS217 |
Unspecified |
| scaffold15986 |
16077 |
16623 |
- |
RS217 |
Unspecified |
| scaffold15986 |
16692 |
16769 |
+ |
(TTC)n |
Simple_repeat |
| scaffold15986 |
16791 |
16938 |
+ |
RS10931 |
Unspecified |
| scaffold15986 |
17021 |
17141 |
+ |
RS1893 |
Unspecified |
| scaffold15986 |
17143 |
17285 |
- |
RS1753 |
Unspecified |
| scaffold15986 |
17164 |
17546 |
- |
PL344 |
Unspecified |
| scaffold15986 |
17547 |
18158 |
- |
PL344 |
Unspecified |
| scaffold15986 |
18206 |
18253 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
18591 |
18666 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
18956 |
19450 |
+ |
RS403 |
Unspecified |
| scaffold15986 |
19045 |
20319 |
- |
RS57 |
Unspecified |
| scaffold15986 |
20646 |
20762 |
- |
RS10876 |
Unspecified |
| scaffold15986 |
21770 |
22966 |
- |
RS934 |
Unspecified |
| scaffold15986 |
21927 |
22966 |
+ |
RS1941 |
Unspecified |
| scaffold15986 |
22968 |
23586 |
+ |
PL510 |
Unspecified |
| scaffold15986 |
24043 |
24408 |
+ |
RS330 |
Unspecified |
| scaffold15986 |
24410 |
24736 |
+ |
PL255 |
Unspecified |
| scaffold15986 |
24736 |
24812 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
24811 |
24852 |
+ |
GA-rich |
Low_complexity |
| scaffold15986 |
25294 |
25329 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold15986 |
25460 |
25476 |
+ |
(A)n |
Simple_repeat |
| scaffold15986 |
25547 |
26107 |
+ |
PL408 |
Unspecified |
| scaffold15986 |
26106 |
26673 |
+ |
(AT)n |
Simple_repeat |
| scaffold15986 |
26645 |
26673 |
+ |
(AT)n |
Simple_repeat |
| scaffold15986 |
27168 |
27353 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold15986 |
28612 |
28911 |
- |
RS476 |
Unspecified |
| scaffold15986 |
29190 |
29234 |
+ |
(TAATTA)n |
Simple_repeat |
| scaffold15986 |
29412 |
29525 |
- |
RS11471 |
Unspecified |
| scaffold15986 |
29629 |
29702 |
+ |
(TAT)n |
Simple_repeat |
| scaffold15986 |
29817 |
29989 |
+ |
RS12127 |
Unspecified |
| scaffold15986 |
30605 |
30724 |
+ |
RS10706 |
Unspecified |
| scaffold15986 |
30897 |
30957 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold15986 |
31355 |
31442 |
+ |
hAT-13_VVi |
DNA/hAT-Ac |
| scaffold15986 |
33386 |
33554 |
+ |
RS11216 |
Unspecified |
| scaffold15986 |
33793 |
33975 |
+ |
RS12927 |
Unspecified |
| scaffold15986 |
34035 |
34135 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
36259 |
36287 |
+ |
(A)n |
Simple_repeat |
| scaffold15986 |
36668 |
36879 |
+ |
Novosib-6_CR |
DNA/Novosib |
| scaffold15986 |
37841 |
37936 |
+ |
(TGA)n |
Simple_repeat |
| scaffold15986 |
38677 |
38715 |
+ |
(CTTTGTA)n |
Simple_repeat |
| scaffold15986 |
38677 |
38886 |
+ |
(CTTTGTA)n |
Simple_repeat |
| scaffold15986 |
38706 |
38886 |
- |
RS12927 |
Unspecified |
| scaffold15986 |
39129 |
39297 |
- |
RS11216 |
Unspecified |
| scaffold15986 |
39704 |
39734 |
+ |
GA-rich |
Low_complexity |
| scaffold15986 |
39826 |
39852 |
+ |
(GT)n |
Simple_repeat |
| scaffold15986 |
39842 |
39898 |
+ |
(GTA)n |
Simple_repeat |
| scaffold15986 |
40219 |
40264 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
41059 |
41090 |
+ |
(AAATCG)n |
Simple_repeat |
| scaffold15986 |
41482 |
41628 |
+ |
(GTT)n |
Simple_repeat |
| scaffold15986 |
42232 |
42273 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
43080 |
43930 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold15986 |
43080 |
43143 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold15986 |
43118 |
43930 |
- |
PL874 |
Unspecified |
| scaffold15986 |
44007 |
44769 |
+ |
PL344 |
Unspecified |
| scaffold15986 |
44328 |
44853 |
+ |
RS3286 |
Unspecified |
| scaffold15986 |
45164 |
45189 |
+ |
(AGAGC)n |
Simple_repeat |
| scaffold15986 |
45524 |
45589 |
+ |
(TGT)n |
Simple_repeat |
| scaffold15986 |
45590 |
45642 |
+ |
(TTA)n |
Simple_repeat |
| scaffold15986 |
45643 |
45653 |
+ |
(TGT)n |
Simple_repeat |
| scaffold15986 |
45676 |
45753 |
+ |
(GATGAA)n |
Simple_repeat |
| scaffold15986 |
45857 |
46360 |
+ |
PL799 |
Unspecified |
| scaffold15986 |
46367 |
46399 |
+ |
(TTA)n |
Simple_repeat |
| scaffold15986 |
46405 |
46461 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
46699 |
46775 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
47439 |
47484 |
- |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold15986 |
47705 |
48242 |
+ |
RS403 |
Unspecified |
| scaffold15986 |
48103 |
48536 |
- |
RS189 |
Unspecified |
| scaffold15986 |
48555 |
48956 |
+ |
PL13 |
Unspecified |
| scaffold15986 |
48773 |
49074 |
- |
RS7703 |
Unspecified |
| scaffold15986 |
49194 |
49250 |
+ |
(TTAATAA)n |
Simple_repeat |
| scaffold15986 |
49437 |
49481 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold15986 |
49741 |
49789 |
- |
RS217 |
Unspecified |
| scaffold15986 |
49799 |
49916 |
+ |
RS6922 |
Unspecified |
| scaffold15986 |
49817 |
49944 |
+ |
RS5449 |
Unspecified |
| scaffold15986 |
50188 |
50386 |
+ |
RS9409 |
Unspecified |
| scaffold15986 |
50503 |
50614 |
+ |
RS12525 |
Unspecified |
| scaffold15986 |
51437 |
51470 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
51918 |
52113 |
- |
RS11275 |
Unspecified |
| scaffold15986 |
52598 |
52922 |
- |
RS3490 |
Unspecified |
| scaffold15986 |
55112 |
55303 |
+ |
RS13513 |
Unspecified |
| scaffold15986 |
55328 |
55440 |
- |
RS10792 |
Unspecified |
| scaffold15986 |
55617 |
55645 |
+ |
(A)n |
Simple_repeat |
| scaffold15986 |
55689 |
55733 |
+ |
(A)n |
Simple_repeat |
| scaffold15986 |
56042 |
56180 |
- |
RS16354 |
Unspecified |
| scaffold15986 |
56177 |
56220 |
+ |
(AAT)n |
Simple_repeat |
| scaffold15986 |
56463 |
56932 |
+ |
RS1864 |
Unspecified |
| scaffold15986 |
57068 |
57165 |
+ |
RS6787 |
Unspecified |
| scaffold15986 |
57667 |
57784 |
+ |
RS15618 |
Unspecified |
| scaffold15986 |
57904 |
57940 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
57989 |
58124 |
- |
RS6265 |
Unspecified |
| scaffold15986 |
58004 |
58186 |
+ |
RS2769 |
Unspecified |
| scaffold15986 |
58232 |
58308 |
+ |
RS2769 |
Unspecified |
| scaffold15986 |
58379 |
58537 |
+ |
RS4315 |
Unspecified |
| scaffold15986 |
59019 |
59059 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold15986 |
59206 |
59277 |
+ |
RS1878 |
Unspecified |
| scaffold15986 |
59271 |
59392 |
+ |
RS2326 |
Unspecified |
| scaffold15986 |
60379 |
60453 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold15986 |
60900 |
60950 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold15986 |
61025 |
61499 |
+ |
PL350 |
Unspecified |
| scaffold15986 |
61800 |
61831 |
+ |
(AACTAA)n |
Simple_repeat |
| scaffold15986 |
62181 |
62207 |
+ |
A-rich |
Low_complexity |
| scaffold15986 |
63090 |
63135 |
+ |
A-rich |
Low_complexity |