scaffold16050 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold16050 |
2 |
45 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
| scaffold16050 |
165 |
1406 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold16050 |
426 |
752 |
+ |
GmCOPIA10_I-int |
LTR/Copia |
| scaffold16050 |
1692 |
2321 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold16050 |
2488 |
2762 |
+ |
Copia-37-I_ZM |
LTR/Copia |
| scaffold16050 |
3482 |
3993 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold16050 |
4240 |
4287 |
+ |
COPIA2-I_LC |
LTR/Copia |
| scaffold16050 |
4396 |
4820 |
+ |
RS17793 |
Unspecified |
| scaffold16050 |
4895 |
4930 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16050 |
5140 |
5430 |
- |
RS2694 |
Unspecified |
| scaffold16050 |
5432 |
5759 |
+ |
RS2743 |
Unspecified |
| scaffold16050 |
5954 |
6159 |
+ |
(A)n |
Simple_repeat |
| scaffold16050 |
5954 |
5982 |
+ |
(A)n |
Simple_repeat |
| scaffold16050 |
5978 |
6159 |
+ |
RS4486 |
Unspecified |
| scaffold16050 |
6592 |
6862 |
+ |
RS5160 |
Unspecified |
| scaffold16050 |
6846 |
7516 |
+ |
RS4474 |
Unspecified |
| scaffold16050 |
7666 |
7936 |
+ |
RS5160 |
Unspecified |
| scaffold16050 |
7920 |
8590 |
+ |
RS4474 |
Unspecified |
| scaffold16050 |
8835 |
8879 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
8888 |
9118 |
+ |
RS8968 |
Unspecified |
| scaffold16050 |
9012 |
9131 |
+ |
RS4656 |
Unspecified |
| scaffold16050 |
9126 |
9255 |
- |
PL470 |
Unspecified |
| scaffold16050 |
15748 |
16036 |
+ |
RS516 |
Unspecified |
| scaffold16050 |
16182 |
16281 |
- |
RS5786 |
Unspecified |
| scaffold16050 |
16205 |
16280 |
+ |
RS1599 |
Unspecified |
| scaffold16050 |
16445 |
16492 |
+ |
RS18 |
Unspecified |
| scaffold16050 |
16745 |
16764 |
+ |
(A)n |
Simple_repeat |
| scaffold16050 |
20634 |
20673 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
23550 |
23624 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold16050 |
25109 |
25197 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold16050 |
25426 |
25516 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold16050 |
25588 |
25710 |
- |
PL255 |
Unspecified |
| scaffold16050 |
27955 |
27973 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16050 |
28522 |
28642 |
- |
RS908 |
Unspecified |
| scaffold16050 |
28637 |
28932 |
- |
RS574 |
Unspecified |
| scaffold16050 |
29795 |
29967 |
+ |
RS1874 |
Unspecified |
| scaffold16050 |
30210 |
30256 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
30238 |
30272 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold16050 |
30306 |
30657 |
- |
PL6 |
Unspecified |
| scaffold16050 |
33476 |
34001 |
+ |
PL661 |
Unspecified |
| scaffold16050 |
34635 |
34658 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
35369 |
35395 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
35746 |
35775 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold16050 |
35797 |
35823 |
+ |
(CATA)n |
Simple_repeat |
| scaffold16050 |
38597 |
38625 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold16050 |
38726 |
38752 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold16050 |
39488 |
39543 |
+ |
GA-rich |
Low_complexity |
| scaffold16050 |
39991 |
40020 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold16050 |
41994 |
42168 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold16050 |
42360 |
42556 |
+ |
(TCGGG)n |
Simple_repeat |
| scaffold16050 |
42818 |
42845 |
+ |
(ATAG)n |
Simple_repeat |
| scaffold16050 |
42901 |
42938 |
+ |
(AGAAG)n |
Simple_repeat |
| scaffold16050 |
44409 |
44433 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
44971 |
44997 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
46537 |
46654 |
- |
RS4300 |
Unspecified |
| scaffold16050 |
46657 |
46812 |
- |
RS4300 |
Unspecified |
| scaffold16050 |
47559 |
47843 |
+ |
RS1095 |
Unspecified |
| scaffold16050 |
48170 |
48242 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
48221 |
48275 |
+ |
(ATG)n |
Simple_repeat |
| scaffold16050 |
49085 |
49112 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold16050 |
53014 |
53050 |
+ |
(A)n |
Simple_repeat |
| scaffold16050 |
53791 |
53825 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold16050 |
53992 |
54068 |
+ |
(TTATCTT)n |
Simple_repeat |
| scaffold16050 |
54343 |
54363 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
55878 |
56040 |
+ |
RS133 |
Unspecified |
| scaffold16050 |
56043 |
56215 |
- |
RS133 |
Unspecified |
| scaffold16050 |
56308 |
56774 |
+ |
PL675 |
Unspecified |
| scaffold16050 |
56872 |
56901 |
+ |
(GGTCAA)n |
Simple_repeat |
| scaffold16050 |
57277 |
57389 |
+ |
Copia-69_GM-LTR |
LTR/Copia |
| scaffold16050 |
57425 |
57476 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
57714 |
57789 |
+ |
A-rich |
Low_complexity |
| scaffold16050 |
57964 |
57982 |
+ |
(T)n |
Simple_repeat |
| scaffold16050 |
58199 |
58268 |
- |
hAT-1N_PTr |
DNA/hAT-Ac |
| scaffold16050 |
58913 |
58968 |
+ |
A-rich |
Low_complexity |