scaffold16070 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold16070 |
1 |
102 |
+ |
PL452 |
Unspecified |
| scaffold16070 |
1097 |
1129 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold16070 |
1683 |
1963 |
+ |
RS1256 |
Unspecified |
| scaffold16070 |
1806 |
1995 |
+ |
RS1256 |
Unspecified |
| scaffold16070 |
2065 |
2126 |
+ |
(CAC)n |
Simple_repeat |
| scaffold16070 |
2831 |
3016 |
- |
RS1140 |
Unspecified |
| scaffold16070 |
3628 |
3709 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold16070 |
4754 |
4850 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16070 |
5087 |
5161 |
+ |
(AATAAT)n |
Simple_repeat |
| scaffold16070 |
5171 |
5201 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16070 |
5739 |
5789 |
- |
PL178 |
Unspecified |
| scaffold16070 |
5806 |
5964 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold16070 |
6214 |
6375 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold16070 |
6649 |
6907 |
- |
RS237 |
Unspecified |
| scaffold16070 |
6906 |
7057 |
+ |
RS35 |
Unspecified |
| scaffold16070 |
7158 |
7187 |
+ |
(AAC)n |
Simple_repeat |
| scaffold16070 |
8052 |
8069 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
8288 |
8334 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
13279 |
13336 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16070 |
13556 |
13590 |
+ |
(GTCGTT)n |
Simple_repeat |
| scaffold16070 |
15093 |
15236 |
- |
RS549 |
Unspecified |
| scaffold16070 |
15556 |
15614 |
+ |
(TCAGG)n |
Simple_repeat |
| scaffold16070 |
15859 |
15895 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold16070 |
16228 |
16441 |
+ |
PL141 |
Unspecified |
| scaffold16070 |
16437 |
16482 |
- |
PL7 |
Unspecified |
| scaffold16070 |
16483 |
16896 |
+ |
PL3 |
Unspecified |
| scaffold16070 |
16978 |
17158 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold16070 |
17447 |
17566 |
+ |
PL331 |
Unspecified |
| scaffold16070 |
21181 |
21213 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold16070 |
23580 |
23762 |
- |
RS12287 |
Unspecified |
| scaffold16070 |
24112 |
24186 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16070 |
24318 |
24381 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
26566 |
26607 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16070 |
26656 |
26701 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
27197 |
27340 |
- |
PL223 |
Unspecified |
| scaffold16070 |
27339 |
27645 |
- |
PL223 |
Unspecified |
| scaffold16070 |
28535 |
28595 |
+ |
(TCTGCT)n |
Simple_repeat |
| scaffold16070 |
32214 |
32219 |
+ |
(AACA)n |
Simple_repeat |
| scaffold16070 |
32220 |
32251 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
32252 |
32282 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
32523 |
32545 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
34093 |
34710 |
- |
Gypsy8-VV_I-int |
LTR/Gypsy |
| scaffold16070 |
34877 |
35201 |
- |
Gypsy8-VV_I-int |
LTR/Gypsy |
| scaffold16070 |
35267 |
35352 |
+ |
PL693 |
Unspecified |
| scaffold16070 |
36858 |
36893 |
+ |
(GTG)n |
Simple_repeat |
| scaffold16070 |
36993 |
37144 |
- |
RS4189 |
Unspecified |
| scaffold16070 |
38335 |
38393 |
- |
Gypsy-17_Mad-I |
LTR/Gypsy |
| scaffold16070 |
39529 |
39568 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16070 |
40275 |
40298 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16070 |
40489 |
41142 |
- |
PL441 |
Unspecified |
| scaffold16070 |
41454 |
41544 |
+ |
(TTG)n |
Simple_repeat |
| scaffold16070 |
41712 |
41795 |
+ |
RS286 |
Unspecified |
| scaffold16070 |
41891 |
41926 |
+ |
(T)n |
Simple_repeat |
| scaffold16070 |
42196 |
42342 |
- |
PL433 |
Unspecified |
| scaffold16070 |
42209 |
42359 |
+ |
RS15876 |
Unspecified |
| scaffold16070 |
42620 |
42865 |
- |
RS12434 |
Unspecified |
| scaffold16070 |
43406 |
43438 |
+ |
(T)n |
Simple_repeat |
| scaffold16070 |
43670 |
43720 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
45818 |
45894 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16070 |
45994 |
46078 |
+ |
(ACT)n |
Simple_repeat |
| scaffold16070 |
46256 |
46421 |
- |
RS5318 |
Unspecified |
| scaffold16070 |
46944 |
46976 |
+ |
RS2116 |
Unspecified |
| scaffold16070 |
46980 |
47291 |
- |
RS1650 |
Unspecified |
| scaffold16070 |
47749 |
49119 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold16070 |
50157 |
50191 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
51679 |
53437 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold16070 |
51842 |
53437 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold16070 |
53510 |
54877 |
- |
RIRE1_I-int |
LTR/Copia |
| scaffold16070 |
55316 |
55525 |
- |
RS13321 |
Unspecified |
| scaffold16070 |
56729 |
56755 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold16070 |
57448 |
57487 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold16070 |
59343 |
59446 |
+ |
RS2548 |
Unspecified |
| scaffold16070 |
59575 |
59630 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold16070 |
59876 |
60091 |
+ |
RS556 |
Unspecified |
| scaffold16070 |
60438 |
60493 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold16070 |
61193 |
61241 |
+ |
(ACCATA)n |
Simple_repeat |
| scaffold16070 |
61901 |
62906 |
- |
RS783 |
Unspecified |
| scaffold16070 |
62923 |
62987 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold16070 |
63871 |
63936 |
+ |
(TAATAA)n |
Simple_repeat |
| scaffold16070 |
65157 |
65229 |
+ |
(T)n |
Simple_repeat |
| scaffold16070 |
65328 |
65516 |
+ |
RS9540 |
Unspecified |
| scaffold16070 |
67258 |
67314 |
+ |
(TGAA)n |
Simple_repeat |
| scaffold16070 |
77820 |
77876 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
79284 |
79300 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
81284 |
81338 |
+ |
(TTTAACCCA)n |
Simple_repeat |
| scaffold16070 |
81377 |
81426 |
+ |
(TAATATTT)n |
Simple_repeat |
| scaffold16070 |
81592 |
81627 |
+ |
(TCGTG)n |
Simple_repeat |
| scaffold16070 |
82105 |
82122 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
82152 |
82186 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
83658 |
83795 |
+ |
(GCG)n |
Simple_repeat |
| scaffold16070 |
84159 |
84181 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
84202 |
84241 |
+ |
(ACC)n |
Simple_repeat |
| scaffold16070 |
84555 |
84604 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold16070 |
86757 |
87682 |
- |
PL445 |
Unspecified |
| scaffold16070 |
87755 |
87794 |
+ |
(ATACAA)n |
Simple_repeat |
| scaffold16070 |
88141 |
88459 |
+ |
RS4686 |
Unspecified |
| scaffold16070 |
88534 |
88595 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16070 |
88984 |
89043 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold16070 |
89341 |
89397 |
+ |
A-rich |
Low_complexity |
| scaffold16070 |
89404 |
89438 |
+ |
(ATACAT)n |
Simple_repeat |
| scaffold16070 |
91118 |
91478 |
- |
PL787 |
Unspecified |
| scaffold16070 |
92478 |
92968 |
+ |
RS2897 |
Unspecified |
| scaffold16070 |
92639 |
93046 |
+ |
RS5247 |
Unspecified |
| scaffold16070 |
92734 |
93118 |
+ |
RS5626 |
Unspecified |
| scaffold16070 |
93241 |
93944 |
+ |
RS2421 |
Unspecified |
| scaffold16070 |
93950 |
94260 |
+ |
RS4717 |
Unspecified |
| scaffold16070 |
94358 |
94621 |
+ |
RS264 |
Unspecified |
| scaffold16070 |
95289 |
95393 |
+ |
(GTTTA)n |
Simple_repeat |
| scaffold16070 |
95824 |
95903 |
+ |
(TC)n |
Simple_repeat |
| scaffold16070 |
95918 |
95955 |
+ |
(T)n |
Simple_repeat |
| scaffold16070 |
96852 |
96942 |
+ |
(CAG)n |
Simple_repeat |
| scaffold16070 |
99671 |
99689 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
101812 |
101843 |
+ |
(A)n |
Simple_repeat |
| scaffold16070 |
102436 |
102749 |
+ |
RS1547 |
Unspecified |
| scaffold16070 |
102996 |
103051 |
+ |
(ATTGA)n |
Simple_repeat |
| scaffold16070 |
104332 |
104382 |
+ |
(TGG)n |
Simple_repeat |
| scaffold16070 |
104388 |
104422 |
+ |
(TCTTCG)n |
Simple_repeat |
| scaffold16070 |
104484 |
104531 |
+ |
ATENSPM2 |
DNA/CMC-EnSpm |
| scaffold16070 |
104534 |
104801 |
+ |
RS3445 |
Unspecified |
| scaffold16070 |
104646 |
104904 |
+ |
RS12134 |
Unspecified |
| scaffold16070 |
104958 |
106387 |
+ |
EnSpm-1_EPa |
DNA/CMC-EnSpm |
| scaffold16070 |
106362 |
106398 |
+ |
EnSpm-2_STu |
DNA/CMC-EnSpm |