scaffold1611 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1611 |
388 |
460 |
+ |
RS14517 |
Unspecified |
| scaffold1611 |
440 |
559 |
+ |
RS4272 |
Unspecified |
| scaffold1611 |
1218 |
1399 |
+ |
RS79 |
Unspecified |
| scaffold1611 |
1686 |
1949 |
+ |
RS240 |
Unspecified |
| scaffold1611 |
2150 |
2189 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold1611 |
2296 |
2572 |
+ |
RS1 |
Unspecified |
| scaffold1611 |
2732 |
2753 |
+ |
(A)n |
Simple_repeat |
| scaffold1611 |
2953 |
2970 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
3046 |
3147 |
- |
RS4475 |
Unspecified |
| scaffold1611 |
3574 |
3673 |
- |
RS4475 |
Unspecified |
| scaffold1611 |
3908 |
3947 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold1611 |
5282 |
5319 |
+ |
(AGAACA)n |
Simple_repeat |
| scaffold1611 |
5330 |
5363 |
+ |
(CAT)n |
Simple_repeat |
| scaffold1611 |
7116 |
7147 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold1611 |
7409 |
7455 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold1611 |
7945 |
7994 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
10121 |
10151 |
+ |
(GACGA)n |
Simple_repeat |
| scaffold1611 |
14058 |
14099 |
+ |
(ACA)n |
Simple_repeat |
| scaffold1611 |
14739 |
14982 |
+ |
RS4 |
Unspecified |
| scaffold1611 |
15402 |
15483 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold1611 |
15618 |
15643 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1611 |
16213 |
16234 |
+ |
(A)n |
Simple_repeat |
| scaffold1611 |
17744 |
18035 |
+ |
RS16795 |
Unspecified |
| scaffold1611 |
18115 |
18273 |
+ |
RS16334 |
Unspecified |
| scaffold1611 |
18326 |
18430 |
+ |
RS14905 |
Unspecified |
| scaffold1611 |
20879 |
21187 |
+ |
RS14061 |
Unspecified |
| scaffold1611 |
21384 |
21433 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
22822 |
22975 |
- |
DS-RICE3N |
DNA/hAT-Ac |
| scaffold1611 |
24638 |
24662 |
+ |
(CCA)n |
Simple_repeat |
| scaffold1611 |
24989 |
25159 |
- |
RS11017 |
Unspecified |
| scaffold1611 |
26311 |
26327 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
26566 |
26594 |
+ |
A-rich |
Low_complexity |
| scaffold1611 |
28232 |
28261 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
31785 |
31850 |
+ |
RS34 |
Unspecified |
| scaffold1611 |
32182 |
32231 |
+ |
(CCGCAGT)n |
Simple_repeat |
| scaffold1611 |
32346 |
33062 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1611 |
32571 |
32617 |
+ |
(TCGGAT)n |
Simple_repeat |
| scaffold1611 |
32713 |
32785 |
+ |
(ATG)n |
Simple_repeat |
| scaffold1611 |
36064 |
36243 |
+ |
RS15240 |
Unspecified |
| scaffold1611 |
36306 |
36331 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
36669 |
36698 |
+ |
(ATCAAA)n |
Simple_repeat |
| scaffold1611 |
37286 |
37671 |
+ |
RS15726 |
Unspecified |
| scaffold1611 |
39038 |
39131 |
+ |
(GAT)n |
Simple_repeat |
| scaffold1611 |
39435 |
39552 |
+ |
GA-rich |
Low_complexity |
| scaffold1611 |
39643 |
39687 |
+ |
(AGTT)n |
Simple_repeat |
| scaffold1611 |
40954 |
41050 |
+ |
RS536 |
Unspecified |
| scaffold1611 |
41279 |
41332 |
+ |
GA-rich |
Low_complexity |
| scaffold1611 |
41970 |
41975 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold1611 |
41976 |
42006 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
42007 |
42012 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold1611 |
43290 |
43388 |
+ |
RS4475 |
Unspecified |
| scaffold1611 |
43295 |
43429 |
- |
PL754 |
Unspecified |
| scaffold1611 |
44063 |
44091 |
+ |
(TTGAT)n |
Simple_repeat |
| scaffold1611 |
44097 |
44122 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
48584 |
48682 |
- |
RS4475 |
Unspecified |
| scaffold1611 |
49473 |
49577 |
+ |
LT1_EPa |
LTR? |
| scaffold1611 |
50096 |
50124 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
50282 |
50485 |
- |
RS11959 |
Unspecified |
| scaffold1611 |
50764 |
50804 |
+ |
(TCACTAG)n |
Simple_repeat |
| scaffold1611 |
50919 |
50994 |
+ |
(GATGGT)n |
Simple_repeat |
| scaffold1611 |
51245 |
51284 |
+ |
A-rich |
Low_complexity |
| scaffold1611 |
52082 |
52176 |
- |
RS4475 |
Unspecified |
| scaffold1611 |
52180 |
52212 |
+ |
(T)n |
Simple_repeat |
| scaffold1611 |
52552 |
52584 |
+ |
(CCTCT)n |
Simple_repeat |
| scaffold1611 |
52624 |
52671 |
+ |
(TC)n |
Simple_repeat |
| scaffold1611 |
54207 |
54243 |
+ |
RS1848 |
Unspecified |
| scaffold1611 |
54214 |
54328 |
+ |
RS1 |
Unspecified |
| scaffold1611 |
54547 |
54588 |
- |
RS17262 |
Unspecified |
| scaffold1611 |
55596 |
55692 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold1611 |
55747 |
55782 |
+ |
(A)n |
Simple_repeat |
| scaffold1611 |
56045 |
56085 |
+ |
(ATATATA)n |
Simple_repeat |
| scaffold1611 |
56139 |
56178 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold1611 |
57229 |
57507 |
- |
RS518 |
Unspecified |
| scaffold1611 |
58296 |
58603 |
+ |
RS586 |
Unspecified |
| scaffold1611 |
58296 |
58513 |
- |
RS356 |
Unspecified |
| scaffold1611 |
58512 |
58615 |
- |
RS18072 |
Unspecified |
| scaffold1611 |
58725 |
58734 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold1611 |
58735 |
58761 |
+ |
(ATAAA)n |
Simple_repeat |
| scaffold1611 |
58762 |
58768 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold1611 |
62832 |
62895 |
- |
RS14620 |
Unspecified |
| scaffold1611 |
62956 |
62986 |
+ |
(TTAATA)n |
Simple_repeat |
| scaffold1611 |
63080 |
63112 |
+ |
(GTCTTC)n |
Simple_repeat |
| scaffold1611 |
63267 |
63359 |
+ |
RS1155 |
Unspecified |
| scaffold1611 |
63267 |
63341 |
+ |
RS9061 |
Unspecified |
| scaffold1611 |
63288 |
63432 |
+ |
RS1155 |
Unspecified |
| scaffold1611 |
109576 |
109883 |
- |
RS536 |
Unspecified |