scaffold16233 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold16233 |
427 |
713 |
+ |
RS6828 |
Unspecified |
| scaffold16233 |
1224 |
1302 |
+ |
RS195 |
Unspecified |
| scaffold16233 |
1295 |
2285 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold16233 |
2673 |
4505 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold16233 |
2762 |
4334 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold16233 |
3462 |
4179 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold16233 |
5418 |
5523 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold16233 |
6178 |
6283 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold16233 |
6796 |
6837 |
+ |
(TTGTAG)n |
Simple_repeat |
| scaffold16233 |
7268 |
7365 |
- |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold16233 |
8229 |
8927 |
- |
RS3148 |
Unspecified |
| scaffold16233 |
8928 |
9956 |
- |
RS3148 |
Unspecified |
| scaffold16233 |
11171 |
11225 |
+ |
(GTT)n |
Simple_repeat |
| scaffold16233 |
11522 |
11566 |
+ |
(TTTTCGT)n |
Simple_repeat |
| scaffold16233 |
11963 |
12337 |
- |
RS21 |
Unspecified |
| scaffold16233 |
12150 |
12892 |
- |
RS801 |
Unspecified |
| scaffold16233 |
12609 |
13019 |
- |
PL770 |
Unspecified |
| scaffold16233 |
13023 |
14020 |
+ |
RS2700 |
Unspecified |
| scaffold16233 |
13282 |
15059 |
- |
RS51 |
Unspecified |
| scaffold16233 |
14200 |
15855 |
+ |
PL647 |
Unspecified |
| scaffold16233 |
15912 |
15930 |
+ |
(AT)n |
Simple_repeat |
| scaffold16233 |
17329 |
18408 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold16233 |
17563 |
18152 |
- |
L1-20_CPa |
LINE/L1 |
| scaffold16233 |
18274 |
18327 |
- |
LINE1-42_ZM |
LINE/L1 |
| scaffold16233 |
18460 |
18661 |
+ |
PL86 |
Unspecified |
| scaffold16233 |
20822 |
21252 |
+ |
PL452 |
Unspecified |
| scaffold16233 |
22372 |
22407 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
22575 |
22607 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16233 |
23042 |
23078 |
+ |
GA-rich |
Low_complexity |
| scaffold16233 |
23649 |
23698 |
+ |
(CCA)n |
Simple_repeat |
| scaffold16233 |
23735 |
23770 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16233 |
24147 |
24370 |
- |
RS265 |
Unspecified |
| scaffold16233 |
24978 |
25012 |
+ |
(AGTAGG)n |
Simple_repeat |
| scaffold16233 |
25607 |
25665 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold16233 |
25776 |
26493 |
+ |
RS5536 |
Unspecified |
| scaffold16233 |
26723 |
26771 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16233 |
27533 |
27554 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
27555 |
27739 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16233 |
27740 |
27766 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
29021 |
29547 |
+ |
RS2055 |
Unspecified |
| scaffold16233 |
29434 |
29593 |
+ |
RS1094 |
Unspecified |
| scaffold16233 |
29468 |
29775 |
+ |
RS1094 |
Unspecified |
| scaffold16233 |
29683 |
29857 |
+ |
PL827 |
Unspecified |
| scaffold16233 |
29878 |
30044 |
+ |
RS48 |
Unspecified |
| scaffold16233 |
29943 |
30102 |
+ |
RS48 |
Unspecified |
| scaffold16233 |
30001 |
30160 |
+ |
RS48 |
Unspecified |
| scaffold16233 |
30897 |
30944 |
+ |
(ATCCGA)n |
Simple_repeat |
| scaffold16233 |
31080 |
31117 |
+ |
(TC)n |
Simple_repeat |
| scaffold16233 |
31297 |
31823 |
+ |
RS1781 |
Unspecified |
| scaffold16233 |
31657 |
32021 |
+ |
PL757 |
Unspecified |
| scaffold16233 |
31749 |
32066 |
+ |
RS1716 |
Unspecified |
| scaffold16233 |
32518 |
32612 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
33154 |
33746 |
+ |
RS5510 |
Unspecified |
| scaffold16233 |
33839 |
33876 |
+ |
(TGG)n |
Simple_repeat |
| scaffold16233 |
33959 |
34006 |
+ |
RS1078 |
Unspecified |
| scaffold16233 |
34292 |
34322 |
+ |
(TCAC)n |
Simple_repeat |
| scaffold16233 |
34348 |
34393 |
+ |
(AAACCAAA)n |
Simple_repeat |
| scaffold16233 |
36923 |
37069 |
+ |
RS17686 |
Unspecified |
| scaffold16233 |
39247 |
39508 |
- |
RS963 |
Unspecified |
| scaffold16233 |
39418 |
40044 |
- |
RS9388 |
Unspecified |
| scaffold16233 |
41281 |
41316 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
41489 |
41513 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
44320 |
44369 |
- |
hAT-12_VVi |
DNA/hAT-Tag1 |
| scaffold16233 |
44809 |
44825 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
45210 |
45248 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
45331 |
45356 |
+ |
(TTATGA)n |
Simple_repeat |
| scaffold16233 |
45482 |
45527 |
+ |
(ACC)n |
Simple_repeat |
| scaffold16233 |
45640 |
45742 |
+ |
(AATTG)n |
Simple_repeat |
| scaffold16233 |
45750 |
45805 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
45806 |
45831 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
46613 |
46638 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
49212 |
49244 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
49643 |
49670 |
+ |
(ATC)n |
Simple_repeat |
| scaffold16233 |
50417 |
50445 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold16233 |
50673 |
50743 |
+ |
(GGTTAGT)n |
Simple_repeat |
| scaffold16233 |
50716 |
50752 |
+ |
(GGT)n |
Simple_repeat |
| scaffold16233 |
50875 |
50896 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
51011 |
51042 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold16233 |
51272 |
51287 |
+ |
(AATA)n |
Simple_repeat |
| scaffold16233 |
51288 |
51330 |
+ |
(TATTAAG)n |
Simple_repeat |
| scaffold16233 |
51331 |
51340 |
+ |
(AATA)n |
Simple_repeat |
| scaffold16233 |
51353 |
51617 |
- |
RS109 |
Unspecified |
| scaffold16233 |
51864 |
51945 |
+ |
RS239 |
Unspecified |
| scaffold16233 |
51983 |
52041 |
+ |
(ATTTCA)n |
Simple_repeat |
| scaffold16233 |
52078 |
52098 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
52213 |
52252 |
+ |
(ATATCT)n |
Simple_repeat |
| scaffold16233 |
52253 |
52259 |
+ |
(ATAT)n |
Simple_repeat |
| scaffold16233 |
52706 |
52760 |
+ |
(AATTGTC)n |
Simple_repeat |
| scaffold16233 |
53384 |
53402 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
54558 |
55092 |
- |
RS10355 |
Unspecified |
| scaffold16233 |
55740 |
56007 |
- |
MuDR-22_VV |
DNA/MULE-MuDR |
| scaffold16233 |
55989 |
56379 |
- |
RS5889 |
Unspecified |
| scaffold16233 |
57046 |
57258 |
- |
MUDRAVI2 |
DNA/MULE-MuDR |
| scaffold16233 |
59781 |
59995 |
+ |
Copia-66_GM-LTR |
LTR/Copia |
| scaffold16233 |
60936 |
61060 |
+ |
Copia-86_VV-I |
LTR/Copia |
| scaffold16233 |
61102 |
61261 |
+ |
Copia-66_GM-I |
LTR/Copia |
| scaffold16233 |
66124 |
66283 |
+ |
RS1704 |
Unspecified |
| scaffold16233 |
67183 |
67316 |
+ |
(TCT)n |
Simple_repeat |
| scaffold16233 |
67242 |
67316 |
+ |
(TCT)n |
Simple_repeat |
| scaffold16233 |
67363 |
67389 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
67634 |
67917 |
- |
RS243 |
Unspecified |
| scaffold16233 |
67849 |
67933 |
- |
RS243 |
Unspecified |
| scaffold16233 |
69238 |
69772 |
- |
RS10355 |
Unspecified |
| scaffold16233 |
70250 |
70687 |
- |
MuDR-22_VV |
DNA/MULE-MuDR |
| scaffold16233 |
70669 |
71059 |
- |
RS5889 |
Unspecified |
| scaffold16233 |
71208 |
73220 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold16233 |
71469 |
71511 |
- |
MuDR-12_SBi |
DNA/MULE-MuDR |
| scaffold16233 |
71732 |
72633 |
- |
MUDRAVI2 |
DNA/MULE-MuDR |
| scaffold16233 |
73071 |
73147 |
+ |
(ATCATC)n |
Simple_repeat |
| scaffold16233 |
73859 |
73903 |
+ |
(TTTTGTG)n |
Simple_repeat |
| scaffold16233 |
74947 |
74988 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
74991 |
75073 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16233 |
76569 |
76605 |
+ |
(TTTGAT)n |
Simple_repeat |
| scaffold16233 |
76845 |
76929 |
+ |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold16233 |
77103 |
77148 |
+ |
(TCGTT)n |
Simple_repeat |
| scaffold16233 |
81181 |
81246 |
- |
PL625 |
Unspecified |
| scaffold16233 |
81201 |
82280 |
+ |
PL563 |
Unspecified |
| scaffold16233 |
82283 |
82460 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold16233 |
82376 |
82460 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold16233 |
83310 |
83389 |
+ |
PL408 |
Unspecified |
| scaffold16233 |
83694 |
83849 |
+ |
RS6872 |
Unspecified |
| scaffold16233 |
84039 |
84222 |
+ |
RS6159 |
Unspecified |
| scaffold16233 |
84138 |
84345 |
+ |
RS7227 |
Unspecified |
| scaffold16233 |
84726 |
84866 |
- |
RS191 |
Unspecified |
| scaffold16233 |
87238 |
88168 |
- |
L1-15_GM |
LINE/L1 |
| scaffold16233 |
88739 |
89429 |
+ |
RS541 |
Unspecified |
| scaffold16233 |
91633 |
91668 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
92498 |
92570 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16233 |
93793 |
93899 |
- |
L1-5_GM |
LINE/L1 |
| scaffold16233 |
94356 |
94594 |
+ |
RS10374 |
Unspecified |
| scaffold16233 |
94658 |
94722 |
+ |
(TA)n |
Simple_repeat |
| scaffold16233 |
94695 |
94736 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold16233 |
94894 |
94924 |
+ |
(AT)n |
Simple_repeat |
| scaffold16233 |
94894 |
95169 |
+ |
(AT)n |
Simple_repeat |
| scaffold16233 |
94915 |
95169 |
- |
RS2394 |
Unspecified |
| scaffold16233 |
95170 |
95198 |
+ |
(TA)n |
Simple_repeat |
| scaffold16233 |
95231 |
95262 |
+ |
(AAATAA)n |
Simple_repeat |
| scaffold16233 |
95345 |
95374 |
+ |
(ACT)n |
Simple_repeat |
| scaffold16233 |
95444 |
95707 |
- |
RS41 |
Unspecified |
| scaffold16233 |
95740 |
95771 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16233 |
96031 |
96091 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16233 |
96997 |
97033 |
+ |
(TGT)n |
Simple_repeat |
| scaffold16233 |
97900 |
98146 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold16233 |
98418 |
98475 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
99438 |
99466 |
+ |
(ATCAA)n |
Simple_repeat |
| scaffold16233 |
100654 |
100705 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold16233 |
101522 |
101551 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold16233 |
101802 |
101838 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
102002 |
102388 |
- |
RS512 |
Unspecified |
| scaffold16233 |
102573 |
102605 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
103392 |
103433 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
103498 |
103536 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold16233 |
104533 |
104591 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
104649 |
104680 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold16233 |
104731 |
104762 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold16233 |
104913 |
104963 |
+ |
(TGG)n |
Simple_repeat |
| scaffold16233 |
105695 |
105786 |
+ |
LTR-7_Mad-LTR |
LTR |
| scaffold16233 |
105839 |
105856 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
105938 |
106179 |
+ |
RS4 |
Unspecified |
| scaffold16233 |
107130 |
107315 |
- |
RS43 |
Unspecified |
| scaffold16233 |
107793 |
107816 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
108021 |
108159 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold16233 |
108160 |
108193 |
+ |
(ATGA)n |
Simple_repeat |
| scaffold16233 |
108764 |
108837 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
108993 |
109297 |
+ |
RS4863 |
Unspecified |
| scaffold16233 |
109391 |
109423 |
+ |
(TTTTAT)n |
Simple_repeat |
| scaffold16233 |
110543 |
110955 |
+ |
PL771 |
Unspecified |
| scaffold16233 |
111238 |
111304 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold16233 |
111351 |
111453 |
+ |
RS8 |
Unspecified |
| scaffold16233 |
114347 |
114361 |
+ |
(TCATCC)n |
Simple_repeat |
| scaffold16233 |
114362 |
114414 |
+ |
(TCGTCA)n |
Simple_repeat |
| scaffold16233 |
114415 |
114460 |
+ |
(TCATCC)n |
Simple_repeat |
| scaffold16233 |
114464 |
114498 |
+ |
(TCA)n |
Simple_repeat |
| scaffold16233 |
118069 |
118083 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
118084 |
118107 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
119002 |
119059 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
119109 |
119159 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
119504 |
119542 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
120265 |
120297 |
+ |
(TATT)n |
Simple_repeat |
| scaffold16233 |
124012 |
124041 |
+ |
(AACA)n |
Simple_repeat |
| scaffold16233 |
125814 |
126009 |
- |
RS3031 |
Unspecified |
| scaffold16233 |
135508 |
135528 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
139442 |
139463 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
139748 |
139779 |
+ |
GA-rich |
Low_complexity |
| scaffold16233 |
140059 |
140106 |
+ |
(ATTTCAG)n |
Simple_repeat |
| scaffold16233 |
140547 |
140725 |
+ |
RS870 |
Unspecified |
| scaffold16233 |
140832 |
140904 |
+ |
RS1450 |
Unspecified |
| scaffold16233 |
141635 |
141708 |
+ |
RS4475 |
Unspecified |
| scaffold16233 |
142218 |
142392 |
+ |
RS503 |
Unspecified |
| scaffold16233 |
142376 |
142573 |
- |
RS152 |
Unspecified |
| scaffold16233 |
142749 |
142787 |
+ |
(CTCTC)n |
Simple_repeat |
| scaffold16233 |
145390 |
145430 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
145447 |
145548 |
+ |
(CCG)n |
Simple_repeat |
| scaffold16233 |
147834 |
147927 |
- |
RS4475 |
Unspecified |
| scaffold16233 |
147841 |
147958 |
+ |
PL754 |
Unspecified |
| scaffold16233 |
148427 |
148958 |
+ |
PL692 |
Unspecified |
| scaffold16233 |
148958 |
148974 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
149332 |
149575 |
+ |
RS4 |
Unspecified |
| scaffold16233 |
150061 |
150150 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
150831 |
150967 |
- |
RS15655 |
Unspecified |
| scaffold16233 |
150848 |
151714 |
- |
RS77 |
Unspecified |
| scaffold16233 |
151742 |
151854 |
- |
RS741 |
Unspecified |
| scaffold16233 |
151792 |
152426 |
- |
RS944 |
Unspecified |
| scaffold16233 |
152373 |
152529 |
+ |
RS12377 |
Unspecified |
| scaffold16233 |
152686 |
152716 |
+ |
(TATG)n |
Simple_repeat |
| scaffold16233 |
152776 |
152806 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold16233 |
153157 |
153419 |
- |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold16233 |
153444 |
154907 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold16233 |
153468 |
154508 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16233 |
154557 |
154589 |
+ |
(TTCCTG)n |
Simple_repeat |
| scaffold16233 |
154971 |
155594 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16233 |
155714 |
156810 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16233 |
157078 |
157179 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16233 |
157408 |
157941 |
- |
RS822 |
Unspecified |
| scaffold16233 |
157918 |
158021 |
- |
RS3227 |
Unspecified |
| scaffold16233 |
157940 |
158118 |
- |
RS4334 |
Unspecified |
| scaffold16233 |
158466 |
158889 |
+ |
RS3896 |
Unspecified |
| scaffold16233 |
158947 |
159094 |
- |
RS1082 |
Unspecified |
| scaffold16233 |
159373 |
159410 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
159765 |
159783 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
161135 |
161184 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
161612 |
162530 |
+ |
RS1408 |
Unspecified |
| scaffold16233 |
162692 |
162731 |
- |
RS148 |
Unspecified |
| scaffold16233 |
163302 |
163412 |
- |
RS8070 |
Unspecified |
| scaffold16233 |
163567 |
163795 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold16233 |
164707 |
166034 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold16233 |
166297 |
167949 |
+ |
Copia-31_GM-I |
LTR/Copia |
| scaffold16233 |
167944 |
168053 |
- |
RS8070 |
Unspecified |
| scaffold16233 |
168788 |
168808 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
170012 |
170045 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
170220 |
170372 |
+ |
Copia-67_ZM-I |
LTR/Copia |
| scaffold16233 |
172106 |
172154 |
+ |
RS17600 |
Unspecified |
| scaffold16233 |
172116 |
172384 |
- |
RS17600 |
Unspecified |
| scaffold16233 |
172626 |
173165 |
+ |
RS354 |
Unspecified |
| scaffold16233 |
172848 |
173206 |
+ |
RS946 |
Unspecified |
| scaffold16233 |
172980 |
173242 |
+ |
RS3316 |
Unspecified |
| scaffold16233 |
173025 |
173359 |
- |
RS2051 |
Unspecified |
| scaffold16233 |
173297 |
173478 |
+ |
RS354 |
Unspecified |
| scaffold16233 |
173675 |
173873 |
+ |
PL28 |
Unspecified |
| scaffold16233 |
173914 |
173973 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold16233 |
174583 |
174634 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold16233 |
174696 |
175043 |
+ |
PL307 |
Unspecified |
| scaffold16233 |
176083 |
176222 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16233 |
176848 |
176892 |
+ |
(GAGAGTA)n |
Simple_repeat |
| scaffold16233 |
177152 |
177175 |
+ |
(TTC)n |
Simple_repeat |
| scaffold16233 |
177483 |
177521 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold16233 |
178316 |
178365 |
+ |
(TTGTTTA)n |
Simple_repeat |
| scaffold16233 |
181828 |
181903 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
182005 |
182056 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
183045 |
183097 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
183137 |
183199 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16233 |
183411 |
183463 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
183638 |
183676 |
+ |
(TAGTTTA)n |
Simple_repeat |
| scaffold16233 |
184078 |
184189 |
- |
RS18 |
Unspecified |
| scaffold16233 |
184380 |
184421 |
+ |
RS17600 |
Unspecified |
| scaffold16233 |
184388 |
184664 |
- |
RS17600 |
Unspecified |
| scaffold16233 |
184743 |
184948 |
- |
RS86 |
Unspecified |
| scaffold16233 |
185665 |
185726 |
+ |
RS148 |
Unspecified |
| scaffold16233 |
185719 |
185934 |
+ |
RS148 |
Unspecified |
| scaffold16233 |
186115 |
186178 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
189912 |
189959 |
+ |
(CTCTTCC)n |
Simple_repeat |
| scaffold16233 |
192107 |
192169 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold16233 |
192469 |
192650 |
+ |
RS79 |
Unspecified |
| scaffold16233 |
192998 |
193210 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
193162 |
193210 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
193525 |
193541 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
193940 |
193980 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
194195 |
194230 |
+ |
(TTTAATT)n |
Simple_repeat |
| scaffold16233 |
194332 |
194377 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
194471 |
194511 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16233 |
195679 |
195875 |
+ |
RS3031 |
Unspecified |
| scaffold16233 |
196418 |
196446 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
196505 |
196638 |
+ |
RS1626 |
Unspecified |
| scaffold16233 |
196653 |
196822 |
+ |
RS507 |
Unspecified |
| scaffold16233 |
196816 |
197008 |
+ |
PL621 |
Unspecified |
| scaffold16233 |
200049 |
200266 |
+ |
RS581 |
Unspecified |
| scaffold16233 |
200838 |
201107 |
- |
RS41 |
Unspecified |
| scaffold16233 |
201153 |
201263 |
- |
RS1 |
Unspecified |
| scaffold16233 |
201254 |
201496 |
- |
RS1 |
Unspecified |
| scaffold16233 |
201466 |
201503 |
+ |
RS1 |
Unspecified |
| scaffold16233 |
202033 |
202226 |
+ |
PL622 |
Unspecified |
| scaffold16233 |
202627 |
202656 |
+ |
(CTT)n |
Simple_repeat |
| scaffold16233 |
202944 |
202983 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold16233 |
203188 |
203234 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16233 |
203510 |
203549 |
+ |
(TTTTTTTA)n |
Simple_repeat |
| scaffold16233 |
203681 |
203745 |
+ |
(TGTTTT)n |
Simple_repeat |
| scaffold16233 |
206512 |
206643 |
- |
RS1369 |
Unspecified |
| scaffold16233 |
206833 |
207022 |
- |
RS3871 |
Unspecified |
| scaffold16233 |
207021 |
207262 |
+ |
RS445 |
Unspecified |
| scaffold16233 |
207317 |
207337 |
+ |
(ATCCTC)n |
Simple_repeat |
| scaffold16233 |
207338 |
207378 |
+ |
(TCC)n |
Simple_repeat |
| scaffold16233 |
208074 |
208106 |
+ |
(TCC)n |
Simple_repeat |
| scaffold16233 |
208313 |
208368 |
+ |
(CATTT)n |
Simple_repeat |
| scaffold16233 |
208486 |
208627 |
- |
RS12919 |
Unspecified |
| scaffold16233 |
208903 |
208943 |
+ |
(TCC)n |
Simple_repeat |
| scaffold16233 |
209308 |
209480 |
+ |
RS1362 |
Unspecified |
| scaffold16233 |
209520 |
209817 |
- |
RS1436 |
Unspecified |
| scaffold16233 |
210523 |
210557 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold16233 |
210880 |
210927 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold16233 |
211427 |
211521 |
- |
RS1607 |
Unspecified |
| scaffold16233 |
211514 |
211674 |
- |
RS2719 |
Unspecified |
| scaffold16233 |
211522 |
211693 |
+ |
RS233 |
Unspecified |
| scaffold16233 |
212122 |
212477 |
- |
RS11660 |
Unspecified |
| scaffold16233 |
212967 |
212995 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
214052 |
214244 |
- |
RS12248 |
Unspecified |
| scaffold16233 |
216366 |
216529 |
- |
RS8233 |
Unspecified |
| scaffold16233 |
216430 |
216744 |
- |
RS6639 |
Unspecified |
| scaffold16233 |
217421 |
217621 |
+ |
RS5099 |
Unspecified |
| scaffold16233 |
217622 |
218247 |
+ |
RS1210 |
Unspecified |
| scaffold16233 |
218145 |
218478 |
- |
RS732 |
Unspecified |
| scaffold16233 |
218181 |
218478 |
- |
RS4278 |
Unspecified |
| scaffold16233 |
221406 |
221727 |
- |
PL60 |
Unspecified |
| scaffold16233 |
222849 |
223104 |
+ |
RS47 |
Unspecified |
| scaffold16233 |
222958 |
223129 |
- |
RS16831 |
Unspecified |
| scaffold16233 |
223303 |
223339 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
225202 |
225632 |
+ |
RS303 |
Unspecified |
| scaffold16233 |
225724 |
225763 |
+ |
(ACTAATC)n |
Simple_repeat |
| scaffold16233 |
225774 |
225819 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
226063 |
226106 |
+ |
(TTCTT)n |
Simple_repeat |
| scaffold16233 |
227565 |
227683 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16233 |
228683 |
228747 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
229952 |
229990 |
+ |
(CCATCA)n |
Simple_repeat |
| scaffold16233 |
231246 |
232025 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold16233 |
231246 |
232299 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold16233 |
231551 |
231739 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
231981 |
232554 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
232239 |
232554 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
232609 |
233779 |
+ |
RS110 |
Unspecified |
| scaffold16233 |
233138 |
234421 |
- |
RS405 |
Unspecified |
| scaffold16233 |
234067 |
235011 |
- |
RS168 |
Unspecified |
| scaffold16233 |
235003 |
235159 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
235362 |
236669 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
237486 |
237526 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
238012 |
239367 |
+ |
Gypsy-121_GM-I |
LTR/Gypsy |
| scaffold16233 |
240166 |
240430 |
+ |
RS356 |
Unspecified |
| scaffold16233 |
240769 |
240802 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
240935 |
241503 |
- |
PL469 |
Unspecified |
| scaffold16233 |
241511 |
241546 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
241660 |
241684 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
241857 |
241897 |
+ |
(TTTCATA)n |
Simple_repeat |
| scaffold16233 |
241932 |
241994 |
+ |
(AATATAA)n |
Simple_repeat |
| scaffold16233 |
242833 |
242868 |
+ |
(TAATA)n |
Simple_repeat |
| scaffold16233 |
243144 |
243938 |
+ |
PL617 |
Unspecified |
| scaffold16233 |
244206 |
244255 |
+ |
(CCGGC)n |
Simple_repeat |
| scaffold16233 |
244397 |
244427 |
+ |
(CCGGAC)n |
Simple_repeat |
| scaffold16233 |
244466 |
244600 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
244819 |
245157 |
+ |
RS510 |
Unspecified |
| scaffold16233 |
248061 |
249474 |
+ |
RS1686 |
Unspecified |
| scaffold16233 |
249489 |
249527 |
+ |
(GCTTT)n |
Simple_repeat |
| scaffold16233 |
249528 |
249543 |
+ |
(CGTTTT)n |
Simple_repeat |
| scaffold16233 |
250108 |
250151 |
+ |
(GCTTGT)n |
Simple_repeat |
| scaffold16233 |
253829 |
254815 |
+ |
PL465 |
Unspecified |
| scaffold16233 |
255026 |
255116 |
+ |
(CGA)n |
Simple_repeat |
| scaffold16233 |
256580 |
256628 |
+ |
(ATTTGAA)n |
Simple_repeat |
| scaffold16233 |
259674 |
259695 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
259893 |
260059 |
+ |
G-rich |
Low_complexity |
| scaffold16233 |
260065 |
260089 |
+ |
(GGGTC)n |
Simple_repeat |
| scaffold16233 |
260265 |
260369 |
+ |
G-rich |
Low_complexity |
| scaffold16233 |
263008 |
263074 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
263775 |
264039 |
- |
RS106 |
Unspecified |
| scaffold16233 |
264079 |
264270 |
- |
RS475 |
Unspecified |
| scaffold16233 |
264267 |
264820 |
+ |
PL560 |
Unspecified |
| scaffold16233 |
264821 |
264869 |
- |
RS475 |
Unspecified |
| scaffold16233 |
264882 |
265010 |
+ |
PL169 |
Unspecified |
| scaffold16233 |
265021 |
265382 |
+ |
RS6506 |
Unspecified |
| scaffold16233 |
265383 |
265400 |
+ |
(A)n |
Simple_repeat |
| scaffold16233 |
265730 |
265793 |
- |
PL296 |
Unspecified |
| scaffold16233 |
265802 |
265841 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
266038 |
266069 |
+ |
A-rich |
Low_complexity |
| scaffold16233 |
266260 |
266314 |
+ |
PL169 |
Unspecified |
| scaffold16233 |
266425 |
266451 |
+ |
(TAACT)n |
Simple_repeat |
| scaffold16233 |
266590 |
266624 |
+ |
(ATATTAT)n |
Simple_repeat |
| scaffold16233 |
266625 |
266659 |
+ |
(AT)n |
Simple_repeat |
| scaffold16233 |
266660 |
266670 |
+ |
(ATATTAT)n |
Simple_repeat |
| scaffold16233 |
269082 |
269788 |
+ |
RS1439 |
Unspecified |
| scaffold16233 |
269790 |
270437 |
+ |
RS203 |
Unspecified |
| scaffold16233 |
270437 |
270653 |
+ |
RS5762 |
Unspecified |
| scaffold16233 |
270649 |
271119 |
+ |
RS2941 |
Unspecified |
| scaffold16233 |
271308 |
271329 |
+ |
(T)n |
Simple_repeat |
| scaffold16233 |
271924 |
271973 |
+ |
(TTGTTTA)n |
Simple_repeat |
| scaffold16233 |
272182 |
272226 |
- |
PL265 |
Unspecified |
| scaffold16233 |
275113 |
275147 |
+ |
(TTTCA)n |
Simple_repeat |
| scaffold16233 |
275187 |
275231 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold16233 |
276245 |
276271 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold16233 |
276391 |
276456 |
- |
RS15154 |
Unspecified |