scaffold1641 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1641 |
515 |
554 |
+ |
(ATTTTAA)n |
Simple_repeat |
| scaffold1641 |
1014 |
1103 |
+ |
A-rich |
Low_complexity |
| scaffold1641 |
1660 |
1722 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold1641 |
2003 |
2080 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold1641 |
3185 |
3286 |
- |
RS31 |
Unspecified |
| scaffold1641 |
3503 |
3627 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1641 |
4105 |
4215 |
+ |
Gypsy22-ZM_I-int |
LTR/Gypsy |
| scaffold1641 |
4390 |
4438 |
+ |
(GTTTTT)n |
Simple_repeat |
| scaffold1641 |
4836 |
5086 |
+ |
PL21 |
Unspecified |
| scaffold1641 |
7251 |
7327 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold1641 |
7332 |
7843 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold1641 |
7332 |
7441 |
+ |
(TTATAC)n |
Simple_repeat |
| scaffold1641 |
7390 |
7843 |
+ |
PL49 |
Unspecified |
| scaffold1641 |
7492 |
7963 |
+ |
RS6457 |
Unspecified |
| scaffold1641 |
8011 |
8135 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold1641 |
8738 |
9031 |
- |
RS3768 |
Unspecified |
| scaffold1641 |
10022 |
10364 |
- |
RS1740 |
Unspecified |
| scaffold1641 |
12698 |
12731 |
+ |
(TTGTGT)n |
Simple_repeat |
| scaffold1641 |
13721 |
14891 |
+ |
RS149 |
Unspecified |
| scaffold1641 |
14567 |
14952 |
+ |
RS911 |
Unspecified |
| scaffold1641 |
15121 |
15249 |
+ |
RS911 |
Unspecified |
| scaffold1641 |
15661 |
15768 |
- |
Ogre-VP1_I-int |
LTR/Gypsy |
| scaffold1641 |
16502 |
16603 |
- |
Ogre-PT1_I-int |
LTR/Gypsy |
| scaffold1641 |
17302 |
17333 |
+ |
(TTTGTT)n |
Simple_repeat |
| scaffold1641 |
17517 |
17599 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold1641 |
18546 |
18761 |
+ |
RS2155 |
Unspecified |
| scaffold1641 |
21817 |
22355 |
- |
RS81 |
Unspecified |
| scaffold1641 |
22112 |
22385 |
- |
RS644 |
Unspecified |
| scaffold1641 |
22418 |
22466 |
+ |
(GTTTTT)n |
Simple_repeat |
| scaffold1641 |
23774 |
23969 |
- |
RS5434 |
Unspecified |
| scaffold1641 |
25690 |
25864 |
+ |
RS10222 |
Unspecified |
| scaffold1641 |
26071 |
26777 |
+ |
RS1547 |
Unspecified |
| scaffold1641 |
26784 |
26823 |
+ |
(CAATCA)n |
Simple_repeat |
| scaffold1641 |
27307 |
28909 |
+ |
RS658 |
Unspecified |
| scaffold1641 |
29113 |
29173 |
+ |
(CTGTTG)n |
Simple_repeat |
| scaffold1641 |
29191 |
29227 |
+ |
(GCTTCGT)n |
Simple_repeat |
| scaffold1641 |
29474 |
29657 |
+ |
RS1064 |
Unspecified |
| scaffold1641 |
29561 |
30540 |
- |
RS44 |
Unspecified |
| scaffold1641 |
30187 |
30617 |
- |
RS784 |
Unspecified |
| scaffold1641 |
32287 |
33322 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold1641 |
33812 |
34004 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold1641 |
34044 |
34391 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold1641 |
34086 |
34382 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold1641 |
34468 |
35402 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold1641 |
35376 |
35420 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold1641 |
35576 |
35693 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold1641 |
35752 |
36042 |
+ |
RS535 |
Unspecified |
| scaffold1641 |
40156 |
40193 |
+ |
(TTTGT)n |
Simple_repeat |
| scaffold1641 |
40194 |
40221 |
+ |
(TTTGC)n |
Simple_repeat |
| scaffold1641 |
41919 |
42519 |
+ |
RS1210 |
Unspecified |
| scaffold1641 |
42403 |
43172 |
+ |
RS246 |
Unspecified |
| scaffold1641 |
42537 |
43172 |
+ |
PL219 |
Unspecified |
| scaffold1641 |
43626 |
44217 |
- |
PL411 |
Unspecified |
| scaffold1641 |
44218 |
44347 |
+ |
RS2619 |
Unspecified |
| scaffold1641 |
44990 |
45097 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold1641 |
47527 |
48956 |
- |
RS1496 |
Unspecified |
| scaffold1641 |
47990 |
50059 |
+ |
RS934 |
Unspecified |
| scaffold1641 |
48421 |
50059 |
+ |
RS658 |
Unspecified |
| scaffold1641 |
50191 |
50248 |
+ |
GA-rich |
Low_complexity |
| scaffold1641 |
50334 |
50360 |
+ |
(TCCCT)n |
Simple_repeat |
| scaffold1641 |
50485 |
50932 |
+ |
PL2 |
Unspecified |
| scaffold1641 |
51149 |
51173 |
+ |
(CAAA)n |
Simple_repeat |
| scaffold1641 |
51213 |
51270 |
+ |
(TTTTTAT)n |
Simple_repeat |
| scaffold1641 |
51750 |
51776 |
+ |
(T)n |
Simple_repeat |
| scaffold1641 |
51872 |
51960 |
+ |
(TTTATG)n |
Simple_repeat |
| scaffold1641 |
60250 |
60612 |
- |
RS8 |
Unspecified |
| scaffold1641 |
60771 |
60821 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold1641 |
61167 |
61448 |
- |
RS469 |
Unspecified |
| scaffold1641 |
61211 |
61485 |
- |
RS3106 |
Unspecified |
| scaffold1641 |
61788 |
61824 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold1641 |
61953 |
62137 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold1641 |
62176 |
64476 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold1641 |
63873 |
64224 |
- |
RS14 |
Unspecified |
| scaffold1641 |
64643 |
65273 |
+ |
PL532 |
Unspecified |
| scaffold1641 |
65246 |
65425 |
+ |
RS81 |
Unspecified |
| scaffold1641 |
66554 |
66730 |
- |
RS1539 |
Unspecified |
| scaffold1641 |
66728 |
66824 |
- |
Gypsy10-PTR_I-int |
LTR/Gypsy |
| scaffold1641 |
66960 |
67091 |
- |
Gypsy10-PTR_I-int |
LTR/Gypsy |
| scaffold1641 |
67208 |
67934 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |