scaffold16480 Repeat List
genome start end strand repeat-name repeat-class
scaffold16480 934 960 + (GAGGA)n Simple_repeat
scaffold16480 2899 3572 + A-rich Low_complexity
scaffold16480 3932 3977 + (ATT)n Simple_repeat
scaffold16480 5830 5865 + A-rich Low_complexity
scaffold16480 6635 6663 + (T)n Simple_repeat
scaffold16480 7410 7426 + (T)n Simple_repeat
scaffold16480 7459 7649 + RS15227 Unspecified
scaffold16480 7834 8023 + RS16487 Unspecified
scaffold16480 8365 8430 + (GTTCA)n Simple_repeat
scaffold16480 8582 8666 + (CTGAA)n Simple_repeat
scaffold16480 11875 11913 + (TTCATTT)n Simple_repeat
scaffold16480 13202 13254 + RS13851 Unspecified
scaffold16480 13235 13299 - RS9584 Unspecified
scaffold16480 14708 14733 + (T)n Simple_repeat
scaffold16480 16010 16089 + (ATG)n Simple_repeat
scaffold16480 17719 17750 + Gypsy-74_PTr-I LTR/Gypsy
scaffold16480 17833 17905 + (ATTTT)n Simple_repeat
scaffold16480 18026 18063 + RS4809 Unspecified
scaffold16480 19347 19385 + Copia-11_Pru-I LTR/Copia
scaffold16480 20913 20932 + (T)n Simple_repeat
scaffold16480 22251 22284 + (T)n Simple_repeat
scaffold16480 26876 26905 + A-rich Low_complexity
scaffold16480 27274 27341 + A-rich Low_complexity
scaffold16480 27678 27770 + A-rich Low_complexity
scaffold16480 27771 27776 + (AATAA)n Simple_repeat
scaffold16480 36823 36844 + (T)n Simple_repeat
scaffold16480 37011 37139 + A-rich Low_complexity
scaffold16480 37636 37657 + (A)n Simple_repeat
scaffold16480 37830 37852 + (T)n Simple_repeat
scaffold16480 38377 38395 + (A)n Simple_repeat
scaffold16480 38645 38685 + GA-rich Low_complexity
scaffold16480 38806 38832 + (A)n Simple_repeat
scaffold16480 38905 39343 + PL3 Unspecified
scaffold16480 39598 39649 + (TATAAT)n Simple_repeat
scaffold16480 40746 40790 + (TTTTTAA)n Simple_repeat
scaffold16480 44546 44583 + (AT)n Simple_repeat
scaffold16480 48284 48716 + RS2021 Unspecified
scaffold16480 48888 48944 + A-rich Low_complexity
scaffold16480 49068 49097 + A-rich Low_complexity
scaffold16480 50119 50163 + (ATTAT)n Simple_repeat
scaffold16480 50208 50301 + (TTATT)n Simple_repeat
scaffold16480 50292 50301 + (TTATT)n Simple_repeat
scaffold16480 50302 50328 + (T)n Simple_repeat
scaffold16480 50530 50747 + RS209 Unspecified
scaffold16480 51393 51428 + (A)n Simple_repeat
scaffold16480 52803 52847 + (ATTAT)n Simple_repeat
scaffold16480 52892 52985 + (TTATT)n Simple_repeat
scaffold16480 52976 52985 + (TTATT)n Simple_repeat
scaffold16480 52986 53012 + (T)n Simple_repeat
scaffold16480 53214 53431 + RS209 Unspecified
scaffold16480 53733 53857 - Copia-3_PTri-I LTR/Copia
scaffold16480 53858 53924 - Copia-3_PTri-I LTR/Copia
scaffold16480 57187 57214 + (GTCGT)n Simple_repeat
scaffold16480 57242 57608 + RS1042 Unspecified
scaffold16480 57772 57836 + (TTAA)n Simple_repeat
scaffold16480 58852 58919 + (ATTTT)n Simple_repeat
scaffold16480 60339 60368 + (A)n Simple_repeat
scaffold16480 61566 61787 + (CCTGCA)n Simple_repeat
scaffold16480 68056 68120 + (AATC)n Simple_repeat
scaffold16480 68272 68331 + (ATT)n Simple_repeat
scaffold16480 69392 69460 + A-rich Low_complexity
scaffold16480 69503 69533 + (TATCTT)n Simple_repeat
scaffold16480 70287 70321 + (ATATCAA)n Simple_repeat
scaffold16480 70656 70801 - RS2106 Unspecified
scaffold16480 71145 71333 - PL157 Unspecified
scaffold16480 71173 71336 + PL737 Unspecified
scaffold16480 71374 71672 + RS1220 Unspecified
scaffold16480 72130 72316 - PL390 Unspecified
scaffold16480 73815 73856 + (TTTG)n Simple_repeat
scaffold16480 77081 77123 + A-rich Low_complexity
scaffold16480 77525 77958 + PL531 Unspecified
scaffold16480 78118 78141 + (A)n Simple_repeat
scaffold16480 78431 78525 + RS4475 Unspecified
scaffold16480 78956 79007 + (TTTT)n Simple_repeat
scaffold16480 80814 80919 + RS16382 Unspecified
scaffold16480 82307 82337 + (TTTAA)n Simple_repeat
scaffold16480 82461 82510 + (ATTTA)n Simple_repeat
scaffold16480 82716 82754 + (TGATCATGA)n Simple_repeat
scaffold16480 82834 82910 + (TTTATT)n Simple_repeat
scaffold16480 86992 87087 + (CTGAA)n Simple_repeat
scaffold16480 87119 87188 + (CTGAA)n Simple_repeat
scaffold16480 87119 87215 + (CTGAA)n Simple_repeat
scaffold16480 87172 87215 - RS15316 Unspecified
scaffold16480 87626 87792 - RS12249 Unspecified
scaffold16480 87883 88024 + RS1450 Unspecified
scaffold16480 88455 88596 - RS54 Unspecified
scaffold16480 88654 88835 - RS79 Unspecified
scaffold16480 89902 89955 + (TTA)n Simple_repeat
scaffold16480 90553 90806 + RS356 Unspecified
scaffold16480 91757 91807 + (ATTAT)n Simple_repeat
scaffold16480 92050 92188 - RS1759 Unspecified
scaffold16480 92768 92847 - RS418 Unspecified
scaffold16480 93250 93401 + RS1 Unspecified
scaffold16480 94546 95382 + TY1_Copia TY1_Copia(TransposonPSI)
scaffold16480 94555 95039 + Copia-30-I_VV LTR/Copia
scaffold16480 95552 96789 + Copia-30-I_VV LTR/Copia
scaffold16480 97277 98797 + Copia-30-I_VV LTR/Copia
scaffold16480 99090 99432 + RS595 Unspecified
scaffold16480 99815 99909 - RS16382 Unspecified
scaffold16480 100485 100534 + (TTTAA)n Simple_repeat
scaffold16480 101653 101938 - RS1275 Unspecified
scaffold16480 103474 103502 + (ATTGAA)n Simple_repeat
scaffold16480 103653 103686 + (GGTAGCT)n Simple_repeat
scaffold16480 104504 104540 + (TTTATTT)n Simple_repeat
scaffold16480 105138 105234 + G-rich Low_complexity
scaffold16480 105458 105545 + (GTCGG)n Simple_repeat
scaffold16480 106141 106231 - RS13929 Unspecified
scaffold16480 106151 106229 + PL754 Unspecified
scaffold16480 106544 106578 + (T)n Simple_repeat
scaffold16480 107796 107864 + PL572 Unspecified
scaffold16480 107801 107875 - PL130 Unspecified
scaffold16480 107808 107935 + (T)n Simple_repeat
scaffold16480 107811 107878 + RS29 Unspecified
scaffold16480 107885 107935 + (T)n Simple_repeat
scaffold16480 109125 109400 - RS2968 Unspecified
scaffold16480 109852 110676 - LINE LINE(TransposonPSI)
scaffold16480 110178 110502 - L1-6_Mad LINE/L1
scaffold16480 110873 111009 + PL572 Unspecified
scaffold16480 110888 111281 + RS29 Unspecified
scaffold16480 110888 111189 + RS873 Unspecified
scaffold16480 111621 111676 + (TTA)n Simple_repeat
scaffold16480 112811 112880 + (TTTACAT)n Simple_repeat
scaffold16480 112880 112928 + (ATAA)n Simple_repeat
scaffold16480 114132 114164 + (ACCCGG)n Simple_repeat
scaffold16480 114731 114888 + (TATATAC)n Simple_repeat
scaffold16480 114731 114792 + (TATATAC)n Simple_repeat
scaffold16480 114776 114888 - RS212 Unspecified
scaffold16480 115011 115073 + A-rich Low_complexity
scaffold16480 116208 116250 + (AATAACA)n Simple_repeat
scaffold16480 116878 116899 + (ATTT)n Simple_repeat
scaffold16480 117748 117804 + A-rich Low_complexity
scaffold16480 117915 117971 + (A)n Simple_repeat
scaffold16480 118205 118301 + (A)n Simple_repeat
scaffold16480 118663 118686 + (ACC)n Simple_repeat
scaffold16480 118949 119034 - PL473 Unspecified
scaffold16480 119833 119851 + (ATT)n Simple_repeat
scaffold16480 120581 120608 + A-rich Low_complexity
scaffold16480 124613 124648 + (ATAATT)n Simple_repeat
scaffold16480 125033 125424 + RS29 Unspecified
scaffold16480 126395 126422 + (CATCG)n Simple_repeat
scaffold16480 134708 134724 + (A)n Simple_repeat
scaffold16480 137013 137082 + GA-rich Low_complexity
scaffold16480 137143 137183 + (TAT)n Simple_repeat
scaffold16480 137335 137545 + RS18 Unspecified
scaffold16480 137566 137598 + A-rich Low_complexity
scaffold16480 137735 137762 + (ATAA)n Simple_repeat
scaffold16480 137965 138036 + A-rich Low_complexity
scaffold16480 138084 138328 + RS4 Unspecified
scaffold16480 138471 138510 + (AAT)n Simple_repeat
scaffold16480 138759 138807 + (TTG)n Simple_repeat
scaffold16480 139016 140599 - Copia-30-I_VV LTR/Copia
scaffold16480 140966 142279 - Copia-30-I_VV LTR/Copia
scaffold16480 143211 143259 + (CTACTC)n Simple_repeat
scaffold16480 143972 143995 + (T)n Simple_repeat
scaffold16480 144317 144469 + RS15876 Unspecified
scaffold16480 144471 144578 + RS15876 Unspecified
scaffold16480 144825 145018 + RS4644 Unspecified
scaffold16480 145104 145221 + RS4522 Unspecified
scaffold16480 145545 145746 + A-rich Low_complexity
scaffold16480 145696 145746 + A-rich Low_complexity
scaffold16480 145815 147157 + RS385 Unspecified
scaffold16480 148794 149422 - Copia-30-I_VV LTR/Copia
scaffold16480 150864 150919 + (ATT)n Simple_repeat
scaffold16480 151582 151629 + (TTA)n Simple_repeat
scaffold16480 152342 152389 + A-rich Low_complexity
scaffold16480 152831 152865 + (CTCGAAT)n Simple_repeat
scaffold16480 153536 153729 - RS29 Unspecified
scaffold16480 154714 154739 + (T)n Simple_repeat
scaffold16480 154916 154933 + (A)n Simple_repeat
scaffold16480 155082 155282 + RS4 Unspecified
scaffold16480 155657 155841 + RS16888 Unspecified
scaffold16480 156002 156054 + (TTTA)n Simple_repeat
scaffold16480 156075 156118 + (AATA)n Simple_repeat
scaffold16480 156337 156360 + (T)n Simple_repeat
scaffold16480 156577 157243 + RS77 Unspecified
scaffold16480 157575 157591 + (T)n Simple_repeat
scaffold16480 158609 158649 + (T)n Simple_repeat
scaffold16480 158851 158876 + (T)n Simple_repeat
scaffold16480 158896 158923 + (T)n Simple_repeat
scaffold16480 159618 159830 - RS18 Unspecified
scaffold16480 159942 160157 - RS18 Unspecified
scaffold16480 160370 160388 + (A)n Simple_repeat
scaffold16480 160523 160619 - RS16382 Unspecified
scaffold16480 160826 161395 - RS132 Unspecified
scaffold16480 161932 161954 + (TAAA)n Simple_repeat
scaffold16480 162465 162564 - RS96 Unspecified
scaffold16480 162542 162718 - RS14079 Unspecified
scaffold16480 162567 163348 + PL619 Unspecified
scaffold16480 163743 163773 + (AATAA)n Simple_repeat
scaffold16480 164597 164622 + (T)n Simple_repeat
scaffold16480 164719 164752 + (T)n Simple_repeat
scaffold16480 165047 165087 + A-rich Low_complexity
scaffold16480 165541 165579 + (AATTA)n Simple_repeat
scaffold16480 165857 165893 + (TTTT)n Simple_repeat
scaffold16480 169630 169659 + (TTTTA)n Simple_repeat
scaffold16480 170160 170198 + (T)n Simple_repeat
scaffold16480 170693 171245 + PL141 Unspecified
scaffold16480 172263 172373 + RS12209 Unspecified
scaffold16480 172488 172997 + RS12268 Unspecified
scaffold16480 173523 173708 - RS10694 Unspecified
scaffold16480 176517 176561 + A-rich Low_complexity
scaffold16480 177562 177599 + (GTGAAGA)n Simple_repeat
scaffold16480 179200 179300 - RS711 Unspecified
scaffold16480 179416 179473 + Copia38-PTR_I-int LTR/Copia
scaffold16480 181260 181285 + (ATTA)n Simple_repeat
scaffold16480 181312 181699 - RS29 Unspecified
scaffold16480 181893 181945 + (TA)n Simple_repeat
scaffold16480 183922 184093 + RS179 Unspecified
scaffold16480 184308 184411 + RS178 Unspecified
scaffold16480 184872 184921 + (ATA)n Simple_repeat
scaffold16480 185504 185670 + (CCCGA)n Simple_repeat
scaffold16480 185994 186093 + (CCCGA)n Simple_repeat
scaffold16480 186231 186328 + RS16382 Unspecified
scaffold16480 187066 187205 + G-rich Low_complexity
scaffold16480 187218 187277 + (ATTT)n Simple_repeat
scaffold16480 187413 187448 + (AGTTT)n Simple_repeat
scaffold16480 187601 187707 + PL744 Unspecified
scaffold16480 187894 187919 + (A)n Simple_repeat
scaffold16480 190465 190579 + RS10786 Unspecified
scaffold16480 190631 190661 + GA-rich Low_complexity
scaffold16480 190712 190736 + (TATT)n Simple_repeat
scaffold16480 190935 190997 + (ATCATT)n Simple_repeat
scaffold16480 192418 192678 + RS365 Unspecified
scaffold16480 193566 193630 + SSU-rRNA_Ath rRNA
scaffold16480 194240 194259 + (T)n Simple_repeat
scaffold16480 194661 194784 + RS15316 Unspecified
scaffold16480 194954 194973 + (A)n Simple_repeat
scaffold16480 195040 195065 + (ATC)n Simple_repeat
scaffold16480 195192 195263 + (AATT)n Simple_repeat
scaffold16480 195264 195296 + (AATTT)n Simple_repeat
scaffold16480 195475 195654 + RS15194 Unspecified
scaffold16480 196623 197117 + PL271 Unspecified
scaffold16480 197240 197269 + (TCCC)n Simple_repeat
scaffold16480 197677 197787 + RS14971 Unspecified
scaffold16480 198662 198704 + G-rich Low_complexity
scaffold16480 199313 199355 + (GGT)n Simple_repeat
scaffold16480 199952 200015 + (ACCCATC)n Simple_repeat
scaffold16480 200077 200429 + RS15815 Unspecified
scaffold16480 200437 200861 + RS15375 Unspecified
scaffold16480 200950 201209 - RS237 Unspecified
scaffold16480 201236 201380 - RS12718 Unspecified
scaffold16480 201464 201507 + RS1172 Unspecified
scaffold16480 201608 201695 + TRAMET1 DNA/TcMar-Stowaway
scaffold16480 202126 202217 - LTR-7_Mad-LTR LTR
scaffold16480 202270 202307 + A-rich Low_complexity
scaffold16480 203925 204035 - RS10491 Unspecified
scaffold16480 203938 204055 - RS4475 Unspecified
scaffold16480 203941 204081 + RS16836 Unspecified
scaffold16480 204290 204331 + (A)n Simple_repeat
scaffold16480 204690 204853 + PL261 Unspecified
scaffold16480 205196 205235 + (CATTCA)n Simple_repeat
scaffold16480 205709 205769 + A-rich Low_complexity
scaffold16480 206779 206831 - RS17600 Unspecified
scaffold16480 206833 206958 - RS17600 Unspecified
scaffold16480 207174 207247 + (CTCGTC)n Simple_repeat
scaffold16480 208284 208389 - RS2423 Unspecified
scaffold16480 208417 208435 + (A)n Simple_repeat
scaffold16480 208625 208647 + (ATT)n Simple_repeat
scaffold16480 208815 208851 + (ATT)n Simple_repeat
scaffold16480 208894 208960 + (ATTT)n Simple_repeat
scaffold16480 208978 209271 - RS726 Unspecified
scaffold16480 211234 211255 + (A)n Simple_repeat
scaffold16480 211310 211338 + (CCAGG)n Simple_repeat
scaffold16480 211626 211724 - RS11551 Unspecified
scaffold16480 211752 211793 + (A)n Simple_repeat
scaffold16480 211821 212022 + RS18 Unspecified
scaffold16480 212035 212108 + A-rich Low_complexity
scaffold16480 212305 212486 + RS79 Unspecified
scaffold16480 212565 212667 - RS3146 Unspecified
scaffold16480 212775 212852 + (TCATA)n Simple_repeat
scaffold16480 213098 213133 + (T)n Simple_repeat
scaffold16480 213840 213913 + (A)n Simple_repeat
scaffold16480 216583 216626 + (TTCACAAT)n Simple_repeat
scaffold16480 216945 216976 + (AACAAA)n Simple_repeat
scaffold16480 217657 217712 + (TTATT)n Simple_repeat
scaffold16480 218167 218225 + G-rich Low_complexity
scaffold16480 221228 221297 + A-rich Low_complexity
scaffold16480 221637 221694 + A-rich Low_complexity
scaffold16480 222729 222762 + (ATTAGG)n Simple_repeat
scaffold16480 222860 222891 + (T)n Simple_repeat
scaffold16480 222998 223123 + (ACCTG)n Simple_repeat
scaffold16480 223217 223445 + (CCCGA)n Simple_repeat