scaffold16699 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold16699 |
2472 |
2574 |
+ |
RS1633 |
Unspecified |
| scaffold16699 |
2834 |
3271 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold16699 |
3924 |
3943 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold16699 |
4241 |
4273 |
+ |
(TTTTCA)n |
Simple_repeat |
| scaffold16699 |
4809 |
4839 |
+ |
(GAAAA)n |
Simple_repeat |
| scaffold16699 |
5473 |
5514 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold16699 |
5604 |
5655 |
+ |
(TTAAGT)n |
Simple_repeat |
| scaffold16699 |
6345 |
6438 |
- |
RS101 |
Unspecified |
| scaffold16699 |
6437 |
6463 |
+ |
(AAC)n |
Simple_repeat |
| scaffold16699 |
6497 |
6538 |
+ |
A-rich |
Low_complexity |
| scaffold16699 |
8561 |
8827 |
+ |
RS365 |
Unspecified |
| scaffold16699 |
8842 |
9501 |
- |
hAT |
hAT(TransposonPSI) |
| scaffold16699 |
10734 |
12194 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold16699 |
11917 |
13146 |
- |
RS934 |
Unspecified |
| scaffold16699 |
12692 |
13075 |
- |
PL318 |
Unspecified |
| scaffold16699 |
16040 |
16148 |
+ |
(TGTA)n |
Simple_repeat |
| scaffold16699 |
17596 |
17630 |
+ |
(TGT)n |
Simple_repeat |
| scaffold16699 |
17670 |
18784 |
- |
RS3063 |
Unspecified |
| scaffold16699 |
18200 |
19011 |
- |
PL921 |
Unspecified |
| scaffold16699 |
18550 |
19987 |
- |
PL554 |
Unspecified |
| scaffold16699 |
19050 |
20560 |
+ |
PL888 |
Unspecified |
| scaffold16699 |
20906 |
21627 |
- |
GYPSY3-I_MT |
LTR/Gypsy |
| scaffold16699 |
22000 |
23799 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold16699 |
22193 |
22322 |
- |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16699 |
22412 |
23774 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold16699 |
23911 |
24021 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold16699 |
24202 |
24226 |
+ |
(TTC)n |
Simple_repeat |
| scaffold16699 |
24239 |
24284 |
+ |
(GAGCTGCTT)n |
Simple_repeat |
| scaffold16699 |
24915 |
25047 |
- |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold16699 |
25277 |
25779 |
- |
PL947 |
Unspecified |
| scaffold16699 |
26367 |
26849 |
+ |
PL956 |
Unspecified |
| scaffold16699 |
29214 |
29243 |
+ |
(A)n |
Simple_repeat |
| scaffold16699 |
29674 |
30053 |
+ |
RS8 |
Unspecified |
| scaffold16699 |
32019 |
32370 |
- |
RS703 |
Unspecified |
| scaffold16699 |
32808 |
32837 |
+ |
(T)n |
Simple_repeat |
| scaffold16699 |
33233 |
33245 |
+ |
(CCGAGA)n |
Simple_repeat |
| scaffold16699 |
33246 |
33279 |
+ |
(ACCGCG)n |
Simple_repeat |
| scaffold16699 |
33766 |
34003 |
- |
RS4 |
Unspecified |
| scaffold16699 |
35790 |
35826 |
+ |
A-rich |
Low_complexity |
| scaffold16699 |
35966 |
36191 |
- |
RS2145 |
Unspecified |
| scaffold16699 |
36233 |
36376 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold16699 |
36379 |
36398 |
+ |
(TTG)n |
Simple_repeat |
| scaffold16699 |
36399 |
36451 |
+ |
(TAC)n |
Simple_repeat |
| scaffold16699 |
36629 |
36659 |
+ |
(TCA)n |
Simple_repeat |
| scaffold16699 |
36825 |
37444 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16699 |
37475 |
37574 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold16699 |
37602 |
37773 |
+ |
RS703 |
Unspecified |
| scaffold16699 |
38792 |
38817 |
+ |
(A)n |
Simple_repeat |
| scaffold16699 |
38879 |
38905 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold16699 |
40811 |
41679 |
- |
Copia-2_SL-I |
LTR/Copia |
| scaffold16699 |
45560 |
45931 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold16699 |
45564 |
45911 |
+ |
Copia-51_GM-I |
LTR/Copia |
| scaffold16699 |
46056 |
47597 |
+ |
Copia-51_GM-I |
LTR/Copia |
| scaffold16699 |
48283 |
48561 |
+ |
RS469 |
Unspecified |
| scaffold16699 |
48668 |
48825 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold16699 |
49815 |
49841 |
+ |
(A)n |
Simple_repeat |
| scaffold16699 |
50228 |
50269 |
+ |
A-rich |
Low_complexity |
| scaffold16699 |
51180 |
51412 |
+ |
RS8418 |
Unspecified |
| scaffold16699 |
51618 |
51992 |
+ |
RS4082 |
Unspecified |
| scaffold16699 |
52322 |
52386 |
+ |
(TCACAA)n |
Simple_repeat |
| scaffold16699 |
53100 |
53472 |
- |
PL255 |
Unspecified |
| scaffold16699 |
53427 |
53533 |
+ |
PL255 |
Unspecified |
| scaffold16699 |
53998 |
54105 |
+ |
(GTAT)n |
Simple_repeat |
| scaffold16699 |
56354 |
56394 |
+ |
A-rich |
Low_complexity |
| scaffold16699 |
56460 |
56651 |
+ |
RS41 |
Unspecified |
| scaffold16699 |
56843 |
56943 |
- |
PL714 |
Unspecified |
| scaffold16699 |
56943 |
57058 |
+ |
PL111 |
Unspecified |
| scaffold16699 |
59135 |
59173 |
+ |
(ATCCG)n |
Simple_repeat |
| scaffold16699 |
59634 |
59657 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold16699 |
59801 |
59921 |
+ |
(GGATATC)n |
Simple_repeat |
| scaffold16699 |
60124 |
60386 |
+ |
RS68 |
Unspecified |
| scaffold16699 |
60898 |
61019 |
- |
RS15138 |
Unspecified |
| scaffold16699 |
60922 |
61177 |
+ |
RS1 |
Unspecified |
| scaffold16699 |
62243 |
62288 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold16699 |
62431 |
62522 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold16699 |
62589 |
62640 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16699 |
62879 |
62904 |
+ |
(T)n |
Simple_repeat |
| scaffold16699 |
63942 |
63976 |
+ |
A-rich |
Low_complexity |
| scaffold16699 |
64331 |
64353 |
+ |
(T)n |
Simple_repeat |
| scaffold16699 |
64956 |
65212 |
+ |
RS259 |
Unspecified |
| scaffold16699 |
65229 |
65268 |
+ |
G-rich |
Low_complexity |
| scaffold16699 |
66124 |
66171 |
+ |
(CCTTCC)n |
Simple_repeat |
| scaffold16699 |
67497 |
68229 |
- |
RS2043 |
Unspecified |
| scaffold16699 |
69810 |
70228 |
+ |
PL176 |
Unspecified |
| scaffold16699 |
70230 |
70605 |
+ |
RS3216 |
Unspecified |
| scaffold16699 |
71221 |
71262 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold16699 |
71635 |
75074 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold16699 |
75318 |
75976 |
- |
Copia-37_GM-I |
LTR/Copia |
| scaffold16699 |
76468 |
76512 |
+ |
(TGT)n |
Simple_repeat |
| scaffold16699 |
79985 |
80017 |
+ |
(TCCCC)n |
Simple_repeat |
| scaffold16699 |
80759 |
80885 |
+ |
RS79 |
Unspecified |
| scaffold16699 |
81142 |
81404 |
+ |
RS356 |
Unspecified |
| scaffold16699 |
81465 |
83030 |
- |
RS1879 |
Unspecified |
| scaffold16699 |
82227 |
83156 |
- |
PL129 |
Unspecified |
| scaffold16699 |
83488 |
83533 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold16699 |
83661 |
83926 |
- |
RS10 |
Unspecified |
| scaffold16699 |
84277 |
84332 |
+ |
(CCA)n |
Simple_repeat |
| scaffold16699 |
85092 |
85112 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold16699 |
85140 |
85158 |
+ |
(A)n |
Simple_repeat |
| scaffold16699 |
88683 |
89048 |
- |
RS2886 |
Unspecified |
| scaffold16699 |
89083 |
89117 |
+ |
(TGG)n |
Simple_repeat |
| scaffold16699 |
89512 |
89711 |
- |
RS5771 |
Unspecified |
| scaffold16699 |
89764 |
89821 |
+ |
(TTCATC)n |
Simple_repeat |
| scaffold16699 |
89926 |
90679 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold16699 |
90326 |
90679 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold16699 |
90912 |
90979 |
+ |
(GTTTT)n |
Simple_repeat |
| scaffold16699 |
90948 |
90987 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16699 |
93131 |
93154 |
+ |
(A)n |
Simple_repeat |
| scaffold16699 |
93261 |
93408 |
+ |
RS8085 |
Unspecified |
| scaffold16699 |
93903 |
94165 |
+ |
RS3938 |
Unspecified |
| scaffold16699 |
93940 |
94303 |
+ |
RS7763 |
Unspecified |
| scaffold16699 |
94582 |
95057 |
- |
RS72 |
Unspecified |
| scaffold16699 |
95213 |
95237 |
+ |
(AT)n |
Simple_repeat |
| scaffold16699 |
95246 |
95507 |
+ |
RS3938 |
Unspecified |
| scaffold16699 |
95283 |
95645 |
+ |
RS7763 |
Unspecified |
| scaffold16699 |
95917 |
96103 |
- |
RS72 |
Unspecified |
| scaffold16699 |
96107 |
96158 |
- |
RS72 |
Unspecified |
| scaffold16699 |
96162 |
96310 |
+ |
RS2426 |
Unspecified |
| scaffold16699 |
96575 |
96670 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16699 |
100332 |
100363 |
+ |
(TTAGT)n |
Simple_repeat |
| scaffold16699 |
100698 |
102359 |
+ |
RS699 |
Unspecified |
| scaffold16699 |
102262 |
102468 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold16699 |
102365 |
102468 |
+ |
Ogre-MT3_I-int |
LTR/Gypsy |
| scaffold16699 |
103506 |
104084 |
+ |
PL761 |
Unspecified |
| scaffold16699 |
104307 |
104441 |
- |
RS581 |
Unspecified |
| scaffold16699 |
104440 |
104645 |
+ |
RS356 |
Unspecified |
| scaffold16699 |
104530 |
104645 |
- |
RS581 |
Unspecified |
| scaffold16699 |
104994 |
105299 |
- |
RS3354 |
Unspecified |
| scaffold16699 |
105627 |
106365 |
+ |
PL470 |
Unspecified |
| scaffold16699 |
106924 |
106971 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold16699 |
108379 |
108834 |
- |
PL2 |
Unspecified |
| scaffold16699 |
109808 |
109832 |
+ |
(ATTACT)n |
Simple_repeat |
| scaffold16699 |
109865 |
109892 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold16699 |
109893 |
109900 |
+ |
(AGTTTT)n |
Simple_repeat |
| scaffold16699 |
110168 |
110197 |
+ |
(AG)n |
Simple_repeat |