scaffold16708 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold16708 |
306 |
354 |
+ |
PL613 |
Unspecified |
| scaffold16708 |
561 |
615 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
1315 |
1395 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
2488 |
2688 |
+ |
PL517 |
Unspecified |
| scaffold16708 |
2493 |
2630 |
+ |
RS11145 |
Unspecified |
| scaffold16708 |
3567 |
3664 |
- |
RS16911 |
Unspecified |
| scaffold16708 |
3571 |
3676 |
+ |
RS13929 |
Unspecified |
| scaffold16708 |
3676 |
3708 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16708 |
3850 |
3904 |
- |
RS9133 |
Unspecified |
| scaffold16708 |
5222 |
5391 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold16708 |
9041 |
9189 |
+ |
(ACCACC)n |
Simple_repeat |
| scaffold16708 |
10179 |
10202 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
10201 |
10599 |
- |
RS2697 |
Unspecified |
| scaffold16708 |
10593 |
11063 |
- |
RS1653 |
Unspecified |
| scaffold16708 |
12270 |
12323 |
+ |
(GCCGT)n |
Simple_repeat |
| scaffold16708 |
12841 |
12879 |
+ |
(TATAC)n |
Simple_repeat |
| scaffold16708 |
13012 |
13088 |
- |
VHARB4_VV |
DNA/PIF-Harbinger |
| scaffold16708 |
13300 |
13370 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
13463 |
13484 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold16708 |
14051 |
14095 |
+ |
(GTGTC)n |
Simple_repeat |
| scaffold16708 |
17987 |
18024 |
+ |
(AAAATT)n |
Simple_repeat |
| scaffold16708 |
18609 |
18665 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold16708 |
20543 |
20586 |
+ |
(GCTGTC)n |
Simple_repeat |
| scaffold16708 |
22569 |
22597 |
+ |
(CTCTT)n |
Simple_repeat |
| scaffold16708 |
24046 |
24088 |
- |
RS5029 |
Unspecified |
| scaffold16708 |
24514 |
24535 |
+ |
(CTA)n |
Simple_repeat |
| scaffold16708 |
24797 |
24824 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold16708 |
24873 |
25253 |
+ |
RS8 |
Unspecified |
| scaffold16708 |
25284 |
25319 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
30823 |
30856 |
+ |
(AAC)n |
Simple_repeat |
| scaffold16708 |
36597 |
36918 |
- |
RS1006 |
Unspecified |
| scaffold16708 |
36916 |
36948 |
+ |
(AATCT)n |
Simple_repeat |
| scaffold16708 |
37073 |
37237 |
- |
RS4740 |
Unspecified |
| scaffold16708 |
37418 |
37541 |
- |
RS7010 |
Unspecified |
| scaffold16708 |
37572 |
37669 |
+ |
RS6961 |
Unspecified |
| scaffold16708 |
37778 |
37859 |
+ |
RS2785 |
Unspecified |
| scaffold16708 |
37801 |
38039 |
+ |
RS172 |
Unspecified |
| scaffold16708 |
39556 |
39735 |
+ |
RS1746 |
Unspecified |
| scaffold16708 |
39633 |
39778 |
- |
RS1746 |
Unspecified |
| scaffold16708 |
39919 |
39991 |
+ |
(AATT)n |
Simple_repeat |
| scaffold16708 |
40054 |
40188 |
+ |
RS4384 |
Unspecified |
| scaffold16708 |
40186 |
40299 |
- |
RS1746 |
Unspecified |
| scaffold16708 |
40747 |
40782 |
+ |
(ATATAA)n |
Simple_repeat |
| scaffold16708 |
40792 |
40820 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold16708 |
41011 |
41140 |
+ |
(GATTT)n |
Simple_repeat |
| scaffold16708 |
41491 |
41909 |
+ |
GA-rich |
Low_complexity |
| scaffold16708 |
49070 |
49111 |
+ |
(TTTTCAC)n |
Simple_repeat |
| scaffold16708 |
51516 |
51584 |
+ |
(AATT)n |
Simple_repeat |
| scaffold16708 |
53115 |
53204 |
+ |
(TCA)n |
Simple_repeat |
| scaffold16708 |
53218 |
53262 |
+ |
(CAA)n |
Simple_repeat |
| scaffold16708 |
53422 |
53461 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
54848 |
54873 |
+ |
(CAG)n |
Simple_repeat |
| scaffold16708 |
54874 |
54893 |
+ |
(AAC)n |
Simple_repeat |
| scaffold16708 |
55092 |
55124 |
+ |
(TGAT)n |
Simple_repeat |
| scaffold16708 |
55471 |
55487 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
59501 |
59539 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold16708 |
59753 |
60016 |
+ |
RS586 |
Unspecified |
| scaffold16708 |
62431 |
62458 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
62505 |
62569 |
- |
RS240 |
Unspecified |
| scaffold16708 |
64467 |
64491 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
64833 |
64951 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold16708 |
65169 |
65346 |
- |
RS2452 |
Unspecified |
| scaffold16708 |
65350 |
65424 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
66417 |
66618 |
- |
RS12198 |
Unspecified |
| scaffold16708 |
66699 |
66828 |
+ |
RS14749 |
Unspecified |
| scaffold16708 |
69094 |
69295 |
- |
RS12198 |
Unspecified |
| scaffold16708 |
69391 |
69520 |
+ |
RS14749 |
Unspecified |
| scaffold16708 |
71784 |
71921 |
- |
RS15138 |
Unspecified |
| scaffold16708 |
71824 |
72092 |
+ |
RS1 |
Unspecified |
| scaffold16708 |
72599 |
72800 |
- |
RS12198 |
Unspecified |
| scaffold16708 |
72878 |
73007 |
+ |
RS14749 |
Unspecified |
| scaffold16708 |
75643 |
75844 |
- |
RS12198 |
Unspecified |
| scaffold16708 |
75931 |
76060 |
+ |
RS14749 |
Unspecified |
| scaffold16708 |
77988 |
78034 |
+ |
(ATTCCTT)n |
Simple_repeat |
| scaffold16708 |
78164 |
78206 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold16708 |
78668 |
78705 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
80884 |
80919 |
+ |
(CAC)n |
Simple_repeat |
| scaffold16708 |
82065 |
82362 |
+ |
RS888 |
Unspecified |
| scaffold16708 |
82631 |
82728 |
- |
PL296 |
Unspecified |
| scaffold16708 |
82653 |
82731 |
- |
PL289 |
Unspecified |
| scaffold16708 |
82768 |
82835 |
- |
RS2663 |
Unspecified |
| scaffold16708 |
82830 |
83095 |
+ |
RS1943 |
Unspecified |
| scaffold16708 |
83149 |
83191 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold16708 |
83563 |
83650 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold16708 |
83912 |
83982 |
+ |
(ATAATAA)n |
Simple_repeat |
| scaffold16708 |
84134 |
84187 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
84565 |
84606 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
85244 |
85274 |
+ |
(TA)n |
Simple_repeat |
| scaffold16708 |
86229 |
86257 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold16708 |
86543 |
86576 |
+ |
(CTTCTTC)n |
Simple_repeat |
| scaffold16708 |
86577 |
86629 |
+ |
(CAC)n |
Simple_repeat |
| scaffold16708 |
87287 |
87328 |
+ |
(TT)n |
Simple_repeat |
| scaffold16708 |
88251 |
88272 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
89694 |
89729 |
+ |
(ACGAAT)n |
Simple_repeat |
| scaffold16708 |
89894 |
89982 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
89942 |
89987 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
90689 |
90757 |
+ |
(TACATA)n |
Simple_repeat |
| scaffold16708 |
92452 |
92469 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
93526 |
93544 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
95248 |
95287 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
95484 |
95519 |
+ |
(TGAAAT)n |
Simple_repeat |
| scaffold16708 |
100368 |
100406 |
+ |
RS38 |
Unspecified |
| scaffold16708 |
102857 |
102875 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
103534 |
103596 |
+ |
RS10681 |
Unspecified |
| scaffold16708 |
104090 |
104137 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16708 |
104446 |
104717 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold16708 |
106197 |
106308 |
- |
RS310 |
Unspecified |
| scaffold16708 |
106304 |
106743 |
+ |
PL645 |
Unspecified |
| scaffold16708 |
107145 |
107336 |
+ |
RS324 |
Unspecified |
| scaffold16708 |
107541 |
107608 |
+ |
GA-rich |
Low_complexity |
| scaffold16708 |
108436 |
108477 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
108573 |
108669 |
+ |
(GAATTTA)n |
Simple_repeat |
| scaffold16708 |
109071 |
109110 |
+ |
(ACAAGTT)n |
Simple_repeat |
| scaffold16708 |
109185 |
109208 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16708 |
109534 |
109608 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
109705 |
109739 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
109958 |
109980 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
110257 |
110792 |
- |
RS4422 |
Unspecified |
| scaffold16708 |
110792 |
110891 |
+ |
RS13348 |
Unspecified |
| scaffold16708 |
110931 |
111088 |
- |
RS18232 |
Unspecified |
| scaffold16708 |
111320 |
111354 |
+ |
(AATTGT)n |
Simple_repeat |
| scaffold16708 |
111564 |
111570 |
+ |
(TATT)n |
Simple_repeat |
| scaffold16708 |
111571 |
111615 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold16708 |
111942 |
111979 |
+ |
(GAAAA)n |
Simple_repeat |
| scaffold16708 |
116662 |
116732 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold16708 |
116733 |
116784 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold16708 |
116838 |
116903 |
- |
RS17 |
Unspecified |
| scaffold16708 |
117670 |
118044 |
- |
RS4921 |
Unspecified |
| scaffold16708 |
117873 |
118311 |
- |
RS1534 |
Unspecified |
| scaffold16708 |
118312 |
118347 |
- |
Gypsy-72_GM-I |
LTR/Gypsy |
| scaffold16708 |
118670 |
118757 |
+ |
Gypsy-23_ST-LTR |
LTR/Gypsy |
| scaffold16708 |
119701 |
120174 |
- |
RS1240 |
Unspecified |
| scaffold16708 |
120209 |
120459 |
- |
RS9953 |
Unspecified |
| scaffold16708 |
120232 |
120420 |
- |
RS1286 |
Unspecified |
| scaffold16708 |
120450 |
120542 |
+ |
RS702 |
Unspecified |
| scaffold16708 |
120540 |
120641 |
- |
RS702 |
Unspecified |
| scaffold16708 |
121287 |
121330 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
121788 |
121821 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
122564 |
122979 |
+ |
RS1675 |
Unspecified |
| scaffold16708 |
123325 |
123353 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
123969 |
123989 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
124181 |
124218 |
+ |
(AATAAG)n |
Simple_repeat |
| scaffold16708 |
125244 |
125470 |
+ |
RS1522 |
Unspecified |
| scaffold16708 |
125901 |
125988 |
+ |
RS1099 |
Unspecified |
| scaffold16708 |
125974 |
126022 |
+ |
RS4569 |
Unspecified |
| scaffold16708 |
126318 |
126734 |
+ |
RS1675 |
Unspecified |
| scaffold16708 |
127320 |
127344 |
+ |
(TGG)n |
Simple_repeat |
| scaffold16708 |
128037 |
128183 |
+ |
RS978 |
Unspecified |
| scaffold16708 |
128395 |
128448 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
129740 |
129799 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
132021 |
132063 |
+ |
(TCATTTG)n |
Simple_repeat |
| scaffold16708 |
137449 |
137504 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
137761 |
137832 |
+ |
(CCG)n |
Simple_repeat |
| scaffold16708 |
138555 |
138597 |
+ |
(TT)n |
Simple_repeat |
| scaffold16708 |
138598 |
138634 |
+ |
(ATTTATT)n |
Simple_repeat |
| scaffold16708 |
139026 |
139052 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold16708 |
139246 |
139287 |
+ |
Copia-143_SB-I |
LTR/Copia |
| scaffold16708 |
140591 |
140802 |
+ |
RS4 |
Unspecified |
| scaffold16708 |
140999 |
141030 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
144844 |
144869 |
+ |
(AAAAT)n |
Simple_repeat |
| scaffold16708 |
145340 |
145379 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
147163 |
147353 |
+ |
RS12287 |
Unspecified |
| scaffold16708 |
147931 |
148100 |
- |
RS11145 |
Unspecified |
| scaffold16708 |
152359 |
152386 |
+ |
(CGGCC)n |
Simple_repeat |
| scaffold16708 |
152359 |
152696 |
+ |
(CGGCC)n |
Simple_repeat |
| scaffold16708 |
152373 |
152722 |
+ |
(GGCCC)n |
Simple_repeat |
| scaffold16708 |
152692 |
152722 |
+ |
(GGCCC)n |
Simple_repeat |
| scaffold16708 |
156804 |
156850 |
+ |
(ATTTCGA)n |
Simple_repeat |
| scaffold16708 |
158016 |
158072 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold16708 |
158405 |
158501 |
- |
RS17606 |
Unspecified |
| scaffold16708 |
165290 |
165470 |
- |
RS10 |
Unspecified |
| scaffold16708 |
166004 |
166022 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
173932 |
173966 |
+ |
(CTAAGCT)n |
Simple_repeat |
| scaffold16708 |
174365 |
174400 |
+ |
(TCA)n |
Simple_repeat |
| scaffold16708 |
174478 |
174523 |
+ |
(TCTTGT)n |
Simple_repeat |
| scaffold16708 |
174777 |
174852 |
+ |
(CGGCC)n |
Simple_repeat |
| scaffold16708 |
174998 |
175040 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold16708 |
175106 |
175163 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
175178 |
175541 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
175178 |
175306 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
175251 |
175541 |
+ |
RS14228 |
Unspecified |
| scaffold16708 |
175876 |
175985 |
- |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold16708 |
176546 |
176746 |
- |
RS4 |
Unspecified |
| scaffold16708 |
176745 |
176768 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
177165 |
177187 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
179253 |
179287 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
182718 |
182764 |
+ |
(TA)n |
Simple_repeat |
| scaffold16708 |
182765 |
182970 |
- |
RS201 |
Unspecified |
| scaffold16708 |
182804 |
183025 |
+ |
RS10896 |
Unspecified |
| scaffold16708 |
183168 |
183252 |
+ |
(TTAATTT)n |
Simple_repeat |
| scaffold16708 |
183685 |
183836 |
+ |
RS7869 |
Unspecified |
| scaffold16708 |
184052 |
184077 |
+ |
(TA)n |
Simple_repeat |
| scaffold16708 |
185457 |
185530 |
- |
RS8847 |
Unspecified |
| scaffold16708 |
186150 |
186228 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold16708 |
186426 |
186487 |
+ |
(TA)n |
Simple_repeat |
| scaffold16708 |
187667 |
187995 |
- |
PL260 |
Unspecified |
| scaffold16708 |
188158 |
188608 |
+ |
PL352 |
Unspecified |
| scaffold16708 |
188889 |
188980 |
- |
RS5812 |
Unspecified |
| scaffold16708 |
189721 |
189743 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
190041 |
190109 |
+ |
(AATA)n |
Simple_repeat |
| scaffold16708 |
190376 |
190443 |
- |
RS5782 |
Unspecified |
| scaffold16708 |
191581 |
191654 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold16708 |
191966 |
192062 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
192503 |
192778 |
- |
RS1 |
Unspecified |
| scaffold16708 |
192906 |
192991 |
- |
RS15131 |
Unspecified |
| scaffold16708 |
193057 |
193126 |
- |
RS6434 |
Unspecified |
| scaffold16708 |
193552 |
193571 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
193573 |
193886 |
- |
RS428 |
Unspecified |
| scaffold16708 |
194019 |
194076 |
+ |
(TCAATAA)n |
Simple_repeat |
| scaffold16708 |
194086 |
194135 |
+ |
RS5373 |
Unspecified |
| scaffold16708 |
194660 |
194693 |
+ |
(ACGGAC)n |
Simple_repeat |
| scaffold16708 |
195919 |
196190 |
- |
RS1 |
Unspecified |
| scaffold16708 |
196241 |
196301 |
+ |
RS2958 |
Unspecified |
| scaffold16708 |
196536 |
196564 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
196822 |
197063 |
- |
PL6 |
Unspecified |
| scaffold16708 |
197204 |
197241 |
+ |
(TACCGAA)n |
Simple_repeat |
| scaffold16708 |
200459 |
200490 |
+ |
GA-rich |
Low_complexity |
| scaffold16708 |
203659 |
203727 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
204556 |
204587 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
204629 |
204663 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold16708 |
208276 |
208309 |
+ |
(CTAACGA)n |
Simple_repeat |
| scaffold16708 |
208821 |
208895 |
+ |
(AATT)n |
Simple_repeat |
| scaffold16708 |
209076 |
209337 |
- |
RS1 |
Unspecified |
| scaffold16708 |
209243 |
209350 |
+ |
RS16358 |
Unspecified |
| scaffold16708 |
210125 |
210218 |
+ |
RS15819 |
Unspecified |
| scaffold16708 |
210214 |
210286 |
- |
PL803 |
Unspecified |
| scaffold16708 |
213962 |
214377 |
- |
RS13658 |
Unspecified |
| scaffold16708 |
214009 |
214372 |
- |
RS548 |
Unspecified |
| scaffold16708 |
214293 |
214394 |
+ |
RS17209 |
Unspecified |
| scaffold16708 |
215741 |
216036 |
- |
RS548 |
Unspecified |
| scaffold16708 |
216025 |
216281 |
+ |
RS240 |
Unspecified |
| scaffold16708 |
216274 |
216360 |
- |
RS548 |
Unspecified |
| scaffold16708 |
217052 |
217107 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
217741 |
217831 |
- |
RS13246 |
Unspecified |
| scaffold16708 |
218122 |
218183 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold16708 |
218529 |
218588 |
- |
RS3946 |
Unspecified |
| scaffold16708 |
219750 |
219972 |
+ |
RS94 |
Unspecified |
| scaffold16708 |
219972 |
220029 |
+ |
(TTATA)n |
Simple_repeat |
| scaffold16708 |
220341 |
220405 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
220739 |
220777 |
+ |
(GTG)n |
Simple_repeat |
| scaffold16708 |
221426 |
221479 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
221599 |
221729 |
+ |
RS4475 |
Unspecified |
| scaffold16708 |
223777 |
223839 |
+ |
(ATGGAT)n |
Simple_repeat |
| scaffold16708 |
225543 |
225567 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
225604 |
225636 |
+ |
(AATCCA)n |
Simple_repeat |
| scaffold16708 |
225765 |
225805 |
+ |
GA-rich |
Low_complexity |
| scaffold16708 |
225971 |
225997 |
+ |
(ACACA)n |
Simple_repeat |
| scaffold16708 |
226237 |
226280 |
+ |
(GATTG)n |
Simple_repeat |
| scaffold16708 |
226638 |
226759 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold16708 |
226836 |
226876 |
+ |
(ATTTTT)n |
Simple_repeat |
| scaffold16708 |
226918 |
226950 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
227149 |
227188 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
227636 |
227685 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold16708 |
228028 |
228072 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
228028 |
228361 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
228065 |
228361 |
+ |
RS8466 |
Unspecified |
| scaffold16708 |
228516 |
228569 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
228973 |
229038 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold16708 |
229019 |
229039 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
233598 |
233637 |
+ |
(AATTAA)n |
Simple_repeat |
| scaffold16708 |
233861 |
233878 |
+ |
(C)n |
Simple_repeat |
| scaffold16708 |
234147 |
234232 |
+ |
(TTG)n |
Simple_repeat |
| scaffold16708 |
236713 |
236740 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold16708 |
239259 |
239308 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold16708 |
245642 |
245686 |
+ |
(TACATA)n |
Simple_repeat |
| scaffold16708 |
246607 |
246669 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold16708 |
248850 |
248871 |
+ |
(CTA)n |
Simple_repeat |
| scaffold16708 |
251557 |
251967 |
+ |
PL464 |
Unspecified |
| scaffold16708 |
253065 |
253204 |
- |
Copia-3_EPa-I |
LTR/Copia |
| scaffold16708 |
253848 |
253940 |
+ |
RS13929 |
Unspecified |
| scaffold16708 |
254908 |
254981 |
- |
RS2339 |
Unspecified |
| scaffold16708 |
255391 |
255467 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
255480 |
255575 |
- |
RS2339 |
Unspecified |
| scaffold16708 |
255594 |
255610 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
256931 |
257021 |
+ |
(AGATT)n |
Simple_repeat |
| scaffold16708 |
257190 |
257252 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
258053 |
258324 |
- |
RS356 |
Unspecified |
| scaffold16708 |
258693 |
258746 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
259321 |
259417 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold16708 |
259459 |
259501 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16708 |
259459 |
259648 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16708 |
259496 |
259648 |
+ |
RS4835 |
Unspecified |
| scaffold16708 |
259659 |
259703 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold16708 |
259983 |
260091 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16708 |
260102 |
260229 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16708 |
260232 |
260265 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16708 |
260276 |
260432 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold16708 |
260854 |
260886 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
260969 |
260992 |
+ |
(CA)n |
Simple_repeat |
| scaffold16708 |
261008 |
261041 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16708 |
261247 |
261274 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
261836 |
261925 |
- |
RS4475 |
Unspecified |
| scaffold16708 |
262369 |
262394 |
+ |
(TAC)n |
Simple_repeat |
| scaffold16708 |
262627 |
262674 |
+ |
(ATAGTTA)n |
Simple_repeat |
| scaffold16708 |
262829 |
262900 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold16708 |
263215 |
263243 |
+ |
(ATTA)n |
Simple_repeat |
| scaffold16708 |
263365 |
263398 |
+ |
(CAT)n |
Simple_repeat |
| scaffold16708 |
263917 |
264011 |
+ |
RS4475 |
Unspecified |
| scaffold16708 |
265226 |
265328 |
- |
RS4475 |
Unspecified |
| scaffold16708 |
265725 |
265837 |
- |
RS4475 |
Unspecified |
| scaffold16708 |
266517 |
266541 |
+ |
(ATGAC)n |
Simple_repeat |
| scaffold16708 |
266686 |
266720 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold16708 |
267839 |
267898 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
269290 |
269326 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
269342 |
269359 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
270009 |
270096 |
+ |
RS18111 |
Unspecified |
| scaffold16708 |
270091 |
270191 |
- |
RS727 |
Unspecified |
| scaffold16708 |
271952 |
272025 |
+ |
(TTCAGAAAAC)n |
Simple_repeat |
| scaffold16708 |
272050 |
272448 |
- |
PL729 |
Unspecified |
| scaffold16708 |
273053 |
273072 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
273073 |
273105 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16708 |
273106 |
273268 |
+ |
(CTTCAGAAAA)n |
Simple_repeat |
| scaffold16708 |
273482 |
273508 |
+ |
(TTATT)n |
Simple_repeat |
| scaffold16708 |
273656 |
273752 |
- |
RS893 |
Unspecified |
| scaffold16708 |
274202 |
274262 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
275385 |
275433 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold16708 |
275499 |
275578 |
- |
HAT-N10_Mad |
DNA/hAT-Ac |
| scaffold16708 |
275701 |
275772 |
- |
HAT-N11_Mad |
DNA/hAT-Ac |
| scaffold16708 |
276411 |
276511 |
+ |
RS3989 |
Unspecified |
| scaffold16708 |
276742 |
277170 |
+ |
COP3_I_MT-int |
LTR/Copia |
| scaffold16708 |
277164 |
277288 |
+ |
RS13271 |
Unspecified |
| scaffold16708 |
279468 |
279495 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
281873 |
281911 |
+ |
(TCTG)n |
Simple_repeat |
| scaffold16708 |
282580 |
282640 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
282670 |
282754 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
283017 |
283067 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold16708 |
283407 |
283424 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
283470 |
283491 |
+ |
(AT)n |
Simple_repeat |
| scaffold16708 |
283784 |
283807 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
283968 |
284003 |
+ |
(TAT)n |
Simple_repeat |
| scaffold16708 |
284177 |
284276 |
- |
RS16382 |
Unspecified |
| scaffold16708 |
284525 |
285016 |
- |
PL271 |
Unspecified |
| scaffold16708 |
285508 |
285588 |
+ |
(TTTTTAA)n |
Simple_repeat |
| scaffold16708 |
286298 |
286342 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
286892 |
286966 |
+ |
(TAA)n |
Simple_repeat |
| scaffold16708 |
287120 |
287138 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
288613 |
288741 |
+ |
RS1172 |
Unspecified |
| scaffold16708 |
288630 |
288893 |
+ |
RS356 |
Unspecified |
| scaffold16708 |
289066 |
289100 |
+ |
(AATTT)n |
Simple_repeat |
| scaffold16708 |
289545 |
289723 |
+ |
RS179 |
Unspecified |
| scaffold16708 |
289729 |
289928 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold16708 |
290305 |
290452 |
- |
RS41 |
Unspecified |
| scaffold16708 |
290701 |
290723 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold16708 |
291579 |
291602 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
291783 |
291927 |
- |
RS133 |
Unspecified |
| scaffold16708 |
292009 |
292057 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
293646 |
293760 |
- |
RS4475 |
Unspecified |
| scaffold16708 |
294094 |
294273 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold16708 |
294629 |
294735 |
+ |
RS16836 |
Unspecified |
| scaffold16708 |
294641 |
294734 |
+ |
RS16382 |
Unspecified |
| scaffold16708 |
295572 |
295834 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold16708 |
297699 |
297730 |
+ |
(GTTCA)n |
Simple_repeat |
| scaffold16708 |
298295 |
298332 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
298740 |
299078 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
299054 |
299078 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
300582 |
300631 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold16708 |
302208 |
302471 |
+ |
RS47 |
Unspecified |
| scaffold16708 |
302438 |
302476 |
- |
RS47 |
Unspecified |
| scaffold16708 |
303023 |
303058 |
+ |
GA-rich |
Low_complexity |
| scaffold16708 |
303348 |
303404 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold16708 |
304239 |
304790 |
- |
PL490 |
Unspecified |
| scaffold16708 |
307100 |
307171 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold16708 |
307257 |
307350 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold16708 |
307441 |
307507 |
+ |
(ATCATT)n |
Simple_repeat |
| scaffold16708 |
307528 |
307588 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold16708 |
307959 |
307986 |
- |
LT1_EPa |
LTR? |
| scaffold16708 |
308300 |
308389 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold16708 |
308457 |
308493 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
308555 |
308579 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
308675 |
308746 |
- |
Copia-40_VV-LTR |
LTR/Copia |
| scaffold16708 |
309577 |
309642 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
310412 |
310469 |
- |
OPHELIA3_HV |
LTR/Gypsy |
| scaffold16708 |
311263 |
311281 |
+ |
(CAA)n |
Simple_repeat |
| scaffold16708 |
312356 |
312417 |
+ |
(CAT)n |
Simple_repeat |
| scaffold16708 |
314011 |
314174 |
- |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold16708 |
314234 |
314285 |
- |
Gypsy-39_PT-I |
LTR/Gypsy |
| scaffold16708 |
315424 |
315489 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
317738 |
318793 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold16708 |
317868 |
318781 |
- |
SHALINE10_MT |
LINE/L1 |
| scaffold16708 |
319722 |
319772 |
+ |
(CCA)n |
Simple_repeat |
| scaffold16708 |
320254 |
320302 |
+ |
(GGCGG)n |
Simple_repeat |
| scaffold16708 |
320767 |
320951 |
- |
RS178 |
Unspecified |
| scaffold16708 |
320967 |
321145 |
- |
RS5 |
Unspecified |
| scaffold16708 |
321157 |
321232 |
+ |
RS5 |
Unspecified |
| scaffold16708 |
321337 |
321393 |
+ |
(TTATAA)n |
Simple_repeat |
| scaffold16708 |
323183 |
323230 |
+ |
(TTA)n |
Simple_repeat |
| scaffold16708 |
323394 |
323506 |
+ |
RS4475 |
Unspecified |
| scaffold16708 |
324234 |
324250 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
324380 |
324556 |
- |
PL6 |
Unspecified |
| scaffold16708 |
324554 |
324738 |
+ |
PL501 |
Unspecified |
| scaffold16708 |
325001 |
325073 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold16708 |
325232 |
325272 |
- |
PL807 |
Unspecified |
| scaffold16708 |
325266 |
325601 |
- |
PL807 |
Unspecified |
| scaffold16708 |
326259 |
326285 |
+ |
(AATT)n |
Simple_repeat |
| scaffold16708 |
326652 |
326736 |
- |
LTR-2_MX-LTR |
LTR |
| scaffold16708 |
326860 |
326910 |
+ |
PL701 |
Unspecified |
| scaffold16708 |
327045 |
327196 |
+ |
ATCopia34_LTR |
LTR/Copia |
| scaffold16708 |
327564 |
327647 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold16708 |
327816 |
328567 |
+ |
PL21 |
Unspecified |
| scaffold16708 |
328725 |
328802 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold16708 |
329462 |
329494 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
333098 |
333128 |
- |
RS727 |
Unspecified |
| scaffold16708 |
335050 |
335126 |
+ |
(TTATTAA)n |
Simple_repeat |
| scaffold16708 |
335135 |
335181 |
- |
RS1680 |
Unspecified |
| scaffold16708 |
335906 |
335948 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
336080 |
336099 |
+ |
(A)n |
Simple_repeat |
| scaffold16708 |
336210 |
336239 |
+ |
(TAACAA)n |
Simple_repeat |
| scaffold16708 |
337373 |
337394 |
+ |
(AATC)n |
Simple_repeat |
| scaffold16708 |
339094 |
339132 |
+ |
(TATTTAA)n |
Simple_repeat |
| scaffold16708 |
339503 |
339675 |
+ |
RS586 |
Unspecified |
| scaffold16708 |
339818 |
339865 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
339994 |
340042 |
+ |
(AATATTT)n |
Simple_repeat |
| scaffold16708 |
340018 |
340062 |
+ |
(TATTCTT)n |
Simple_repeat |
| scaffold16708 |
340111 |
340157 |
+ |
A-rich |
Low_complexity |
| scaffold16708 |
340241 |
340269 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
342064 |
342130 |
+ |
(ATA)n |
Simple_repeat |
| scaffold16708 |
342324 |
342527 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold16708 |
342674 |
342862 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold16708 |
342873 |
343128 |
- |
RS94 |
Unspecified |
| scaffold16708 |
344091 |
344120 |
+ |
TRC1 |
DNA/PIF-Harbinger |
| scaffold16708 |
344586 |
344626 |
+ |
RS507 |
Unspecified |
| scaffold16708 |
344596 |
344666 |
+ |
PL622 |
Unspecified |
| scaffold16708 |
345089 |
345189 |
- |
PL754 |
Unspecified |
| scaffold16708 |
345094 |
345201 |
+ |
RS17119 |
Unspecified |
| scaffold16708 |
345798 |
346080 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold16708 |
348763 |
348789 |
+ |
(TTTCAA)n |
Simple_repeat |
| scaffold16708 |
349133 |
349183 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold16708 |
350155 |
350162 |
+ |
(ATT)n |
Simple_repeat |
| scaffold16708 |
350163 |
350195 |
+ |
(TATT)n |
Simple_repeat |
| scaffold16708 |
350805 |
350868 |
+ |
(AAT)n |
Simple_repeat |
| scaffold16708 |
350954 |
350985 |
+ |
(ATAATG)n |
Simple_repeat |
| scaffold16708 |
351037 |
351066 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
351116 |
351134 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
352810 |
352838 |
+ |
(TAATT)n |
Simple_repeat |
| scaffold16708 |
352840 |
352872 |
+ |
(TCTTTT)n |
Simple_repeat |
| scaffold16708 |
353213 |
353267 |
+ |
(ATCACAA)n |
Simple_repeat |
| scaffold16708 |
353553 |
353584 |
+ |
(GGCGGA)n |
Simple_repeat |
| scaffold16708 |
354020 |
354083 |
- |
RS17 |
Unspecified |
| scaffold16708 |
354165 |
354204 |
+ |
RS16604 |
Unspecified |
| scaffold16708 |
354192 |
354311 |
+ |
RS17 |
Unspecified |
| scaffold16708 |
356201 |
356236 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold16708 |
356277 |
356383 |
- |
Copia-3_PTri-I |
LTR/Copia |
| scaffold16708 |
356639 |
356660 |
+ |
(T)n |
Simple_repeat |
| scaffold16708 |
357000 |
357059 |
- |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold16708 |
358044 |
358108 |
+ |
(GACGAT)n |
Simple_repeat |
| scaffold16708 |
359127 |
359193 |
+ |
(GAACAA)n |
Simple_repeat |
| scaffold16708 |
360575 |
361131 |
+ |
RS4422 |
Unspecified |
| scaffold16708 |
361133 |
361175 |
+ |
Atlantys1_I-int |
LTR/Gypsy |
| scaffold16708 |
363608 |
365138 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
| scaffold16708 |
365457 |
365784 |
+ |
Gypsy-47_Mad-I |
LTR/Gypsy |
| scaffold16708 |
365457 |
365828 |
+ |
Gypsy-47_Mad-I |
LTR/Gypsy |