scaffold1684 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1684 |
8 |
77 |
+ |
(ATATT)n |
Simple_repeat |
| scaffold1684 |
1053 |
1211 |
+ |
RS15992 |
Unspecified |
| scaffold1684 |
1805 |
2038 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold1684 |
2338 |
2382 |
+ |
(TCATAA)n |
Simple_repeat |
| scaffold1684 |
3143 |
3390 |
+ |
RS10753 |
Unspecified |
| scaffold1684 |
3672 |
3727 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
3704 |
3727 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
5203 |
5508 |
- |
L1-4_EPa |
LINE/L1 |
| scaffold1684 |
5508 |
5591 |
+ |
RS9966 |
Unspecified |
| scaffold1684 |
5763 |
5805 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
5910 |
6172 |
- |
RS736 |
Unspecified |
| scaffold1684 |
7396 |
7449 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
7444 |
7602 |
+ |
RS559 |
Unspecified |
| scaffold1684 |
7614 |
7638 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
7799 |
7838 |
- |
ATENSAT1 |
Satellite |
| scaffold1684 |
7843 |
7913 |
- |
RS8 |
Unspecified |
| scaffold1684 |
8611 |
8827 |
+ |
RS880 |
Unspecified |
| scaffold1684 |
9377 |
9400 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
9522 |
9757 |
+ |
EnSpm-N1_Mad |
DNA/CMC-EnSpm |
| scaffold1684 |
9762 |
9939 |
+ |
RS460 |
Unspecified |
| scaffold1684 |
10225 |
10403 |
- |
RS38 |
Unspecified |
| scaffold1684 |
10503 |
10837 |
- |
RS132 |
Unspecified |
| scaffold1684 |
11152 |
11184 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
11811 |
11868 |
+ |
(TATTAA)n |
Simple_repeat |
| scaffold1684 |
12029 |
12281 |
+ |
RS237 |
Unspecified |
| scaffold1684 |
12367 |
12422 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold1684 |
12498 |
12519 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
12520 |
12543 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold1684 |
12695 |
13002 |
- |
PL573 |
Unspecified |
| scaffold1684 |
13047 |
13172 |
- |
PL9 |
Unspecified |
| scaffold1684 |
13500 |
13766 |
- |
RS356 |
Unspecified |
| scaffold1684 |
14252 |
14317 |
+ |
(AATAATT)n |
Simple_repeat |
| scaffold1684 |
18273 |
18792 |
- |
RS5561 |
Unspecified |
| scaffold1684 |
19287 |
19315 |
+ |
(AT)n |
Simple_repeat |
| scaffold1684 |
19366 |
19394 |
+ |
(ATAGT)n |
Simple_repeat |
| scaffold1684 |
20090 |
20192 |
- |
RS18316 |
Unspecified |
| scaffold1684 |
20095 |
20186 |
+ |
RS4475 |
Unspecified |
| scaffold1684 |
20842 |
21112 |
+ |
RS1 |
Unspecified |
| scaffold1684 |
21827 |
21861 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
22224 |
22253 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
22827 |
22862 |
+ |
(ATTGAA)n |
Simple_repeat |
| scaffold1684 |
23171 |
23225 |
- |
RS4797 |
Unspecified |
| scaffold1684 |
23223 |
23436 |
+ |
RS28 |
Unspecified |
| scaffold1684 |
23433 |
23515 |
- |
RS4797 |
Unspecified |
| scaffold1684 |
23508 |
23590 |
- |
RS1258 |
Unspecified |
| scaffold1684 |
23833 |
23969 |
+ |
RS1172 |
Unspecified |
| scaffold1684 |
23857 |
24120 |
+ |
RS356 |
Unspecified |
| scaffold1684 |
25456 |
25479 |
+ |
(ACTCG)n |
Simple_repeat |
| scaffold1684 |
27251 |
27402 |
- |
RS38 |
Unspecified |
| scaffold1684 |
28503 |
28550 |
+ |
(TCATCCA)n |
Simple_repeat |
| scaffold1684 |
28551 |
28560 |
+ |
(ATCC)n |
Simple_repeat |
| scaffold1684 |
28726 |
28753 |
+ |
(CTT)n |
Simple_repeat |
| scaffold1684 |
28970 |
28988 |
+ |
(CTT)n |
Simple_repeat |
| scaffold1684 |
32284 |
32313 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
32997 |
33047 |
+ |
(AGCAGA)n |
Simple_repeat |
| scaffold1684 |
33700 |
34152 |
+ |
PL2 |
Unspecified |
| scaffold1684 |
34397 |
34428 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1684 |
34561 |
34580 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
35454 |
35542 |
- |
RS16382 |
Unspecified |
| scaffold1684 |
36252 |
36327 |
+ |
RS4475 |
Unspecified |
| scaffold1684 |
37370 |
37427 |
+ |
(GCCCAA)n |
Simple_repeat |
| scaffold1684 |
41112 |
41152 |
- |
RTE-1_PD |
LINE/RTE-BovB |
| scaffold1684 |
45617 |
45702 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
46390 |
46452 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold1684 |
46787 |
47062 |
+ |
ISC1316 |
ISC1316(TransposonPSI) |
| scaffold1684 |
46814 |
47026 |
+ |
GA-rich |
Low_complexity |
| scaffold1684 |
47398 |
47629 |
- |
RS18 |
Unspecified |
| scaffold1684 |
48250 |
48290 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1684 |
54812 |
54890 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
55047 |
55066 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
56857 |
56890 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
61280 |
61290 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
62080 |
62123 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
63908 |
63944 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
65376 |
65398 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
66125 |
66161 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1684 |
66187 |
66697 |
- |
PL777 |
Unspecified |
| scaffold1684 |
66877 |
67173 |
- |
RS574 |
Unspecified |
| scaffold1684 |
67177 |
67281 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1684 |
67310 |
68076 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1684 |
68077 |
68096 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1684 |
68117 |
68171 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1684 |
68429 |
68454 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
69364 |
69412 |
- |
PL289 |
Unspecified |
| scaffold1684 |
69374 |
69418 |
+ |
PL169 |
Unspecified |
| scaffold1684 |
69905 |
69939 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold1684 |
70041 |
70075 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
70109 |
70298 |
- |
PL655 |
Unspecified |
| scaffold1684 |
70701 |
70851 |
+ |
(GGATCC)n |
Simple_repeat |
| scaffold1684 |
71377 |
71418 |
+ |
(GTT)n |
Simple_repeat |
| scaffold1684 |
76931 |
77021 |
+ |
RS6556 |
Unspecified |
| scaffold1684 |
77171 |
77207 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1684 |
77568 |
77706 |
+ |
RS4838 |
Unspecified |
| scaffold1684 |
80181 |
80200 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
81362 |
81412 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
86823 |
86841 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
87623 |
87687 |
- |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold1684 |
87849 |
88038 |
- |
RS895 |
Unspecified |
| scaffold1684 |
88037 |
88166 |
- |
RS11606 |
Unspecified |
| scaffold1684 |
89144 |
89439 |
- |
RS574 |
Unspecified |
| scaffold1684 |
89803 |
89849 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
90129 |
90157 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold1684 |
90496 |
90565 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold1684 |
90594 |
90768 |
+ |
(ATT)n |
Simple_repeat |
| scaffold1684 |
90769 |
90788 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1684 |
90790 |
90928 |
+ |
(TGAAC)n |
Simple_repeat |
| scaffold1684 |
91725 |
91744 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
92920 |
93010 |
+ |
HADES_TA |
DNA/TcMar-Stowaway |
| scaffold1684 |
93619 |
93657 |
+ |
(ATTCTG)n |
Simple_repeat |
| scaffold1684 |
93959 |
94065 |
+ |
A-rich |
Low_complexity |
| scaffold1684 |
94101 |
94123 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
95441 |
95573 |
- |
Gypsy-13_Mad-I |
LTR/Gypsy |
| scaffold1684 |
95626 |
95659 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1684 |
95816 |
95854 |
+ |
(GTTTTCT)n |
Simple_repeat |
| scaffold1684 |
95867 |
96030 |
+ |
RS1538 |
Unspecified |
| scaffold1684 |
96490 |
96850 |
- |
RS1209 |
Unspecified |
| scaffold1684 |
96709 |
97271 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold1684 |
96836 |
97271 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold1684 |
97506 |
97548 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
97790 |
98390 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold1684 |
99067 |
99273 |
- |
Gypsy-34_VV-I |
LTR/Gypsy |
| scaffold1684 |
99326 |
99359 |
+ |
(TTC)n |
Simple_repeat |
| scaffold1684 |
99516 |
99554 |
+ |
(GTTTTCT)n |
Simple_repeat |
| scaffold1684 |
99567 |
99730 |
+ |
RS1538 |
Unspecified |
| scaffold1684 |
100882 |
101044 |
+ |
RS11183 |
Unspecified |
| scaffold1684 |
101361 |
101372 |
+ |
(TTTTGTT)n |
Simple_repeat |
| scaffold1684 |
101373 |
101401 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
101676 |
101876 |
+ |
RS5771 |
Unspecified |
| scaffold1684 |
102112 |
102139 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
102407 |
102495 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold1684 |
102714 |
102854 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold1684 |
103226 |
103276 |
+ |
(TTTGTAT)n |
Simple_repeat |
| scaffold1684 |
103349 |
103510 |
+ |
RS152 |
Unspecified |
| scaffold1684 |
103514 |
103645 |
- |
RS14541 |
Unspecified |
| scaffold1684 |
103895 |
103946 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1684 |
103965 |
103983 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
104476 |
104517 |
+ |
(AATCA)n |
Simple_repeat |
| scaffold1684 |
105014 |
105168 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1684 |
105177 |
105291 |
- |
RS843 |
Unspecified |
| scaffold1684 |
105411 |
105746 |
- |
RS656 |
Unspecified |
| scaffold1684 |
105739 |
105928 |
- |
RS1298 |
Unspecified |
| scaffold1684 |
106046 |
106079 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
106647 |
106990 |
+ |
RS729 |
Unspecified |
| scaffold1684 |
108225 |
108272 |
- |
PL296 |
Unspecified |
| scaffold1684 |
108234 |
108307 |
+ |
PL169 |
Unspecified |
| scaffold1684 |
108417 |
108476 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold1684 |
108417 |
108980 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold1684 |
108465 |
108980 |
- |
PL399 |
Unspecified |
| scaffold1684 |
109028 |
109058 |
- |
PL399 |
Unspecified |
| scaffold1684 |
109028 |
109065 |
- |
PL125 |
Unspecified |
| scaffold1684 |
109914 |
109951 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
110796 |
110825 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold1684 |
110850 |
110922 |
+ |
(TTATTTT)n |
Simple_repeat |
| scaffold1684 |
111111 |
111159 |
+ |
(ATCTAT)n |
Simple_repeat |
| scaffold1684 |
111496 |
111590 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1684 |
111942 |
111991 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold1684 |
112177 |
112243 |
+ |
L1-9_Mad |
LINE/L1 |
| scaffold1684 |
112396 |
112485 |
- |
RS41 |
Unspecified |
| scaffold1684 |
113011 |
113127 |
+ |
PL77 |
Unspecified |
| scaffold1684 |
113126 |
113361 |
- |
PL466 |
Unspecified |
| scaffold1684 |
113359 |
113747 |
- |
PL374 |
Unspecified |
| scaffold1684 |
113753 |
114098 |
+ |
PL77 |
Unspecified |
| scaffold1684 |
114563 |
114635 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
| scaffold1684 |
114851 |
114885 |
+ |
(T)n |
Simple_repeat |
| scaffold1684 |
114939 |
115127 |
+ |
(TTTTAA)n |
Simple_repeat |
| scaffold1684 |
115264 |
115295 |
+ |
(TCTGTT)n |
Simple_repeat |
| scaffold1684 |
115972 |
116822 |
+ |
RS1700 |
Unspecified |
| scaffold1684 |
116818 |
116868 |
+ |
(TGTG)n |
Simple_repeat |
| scaffold1684 |
117015 |
117060 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1684 |
117200 |
117271 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold1684 |
117622 |
117664 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1684 |
118787 |
118862 |
+ |
GYPOT1_I-int |
LTR/Gypsy |
| scaffold1684 |
118940 |
119790 |
+ |
RS1700 |
Unspecified |
| scaffold1684 |
119786 |
119836 |
+ |
(TGTG)n |
Simple_repeat |
| scaffold1684 |
119983 |
120028 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1684 |
120168 |
120239 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold1684 |
120590 |
120632 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1684 |
121755 |
121789 |
+ |
(TGATTA)n |
Simple_repeat |
| scaffold1684 |
122607 |
122662 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold1684 |
122796 |
123089 |
- |
RS1746 |
Unspecified |
| scaffold1684 |
123250 |
123288 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold1684 |
123269 |
123293 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1684 |
123405 |
124019 |
+ |
RS1447 |
Unspecified |
| scaffold1684 |
124018 |
124118 |
- |
RS556 |
Unspecified |
| scaffold1684 |
124604 |
124940 |
+ |
RS656 |
Unspecified |
| scaffold1684 |
125047 |
125085 |
+ |
(A)n |
Simple_repeat |
| scaffold1684 |
125945 |
126796 |
+ |
RS649 |
Unspecified |
| scaffold1684 |
126803 |
127270 |
- |
RS215 |
Unspecified |
| scaffold1684 |
127274 |
127546 |
+ |
RS5563 |
Unspecified |
| scaffold1684 |
127519 |
127632 |
+ |
RS8255 |
Unspecified |
| scaffold1684 |
127720 |
127921 |
+ |
RS11180 |
Unspecified |