scaffold1719 Repeat List
genome |
start |
end |
strand |
repeat-name |
repeat-class |
scaffold1719 |
5 |
555 |
- |
RS1463 |
Unspecified |
scaffold1719 |
120 |
766 |
- |
RS121 |
Unspecified |
scaffold1719 |
763 |
845 |
+ |
(TGCTTG)n |
Simple_repeat |
scaffold1719 |
1461 |
1944 |
+ |
RS709 |
Unspecified |
scaffold1719 |
2469 |
2750 |
+ |
RS709 |
Unspecified |
scaffold1719 |
2535 |
3430 |
- |
RS2579 |
Unspecified |
scaffold1719 |
3429 |
3632 |
+ |
RS149 |
Unspecified |
scaffold1719 |
3633 |
3740 |
- |
RS10566 |
Unspecified |
scaffold1719 |
5091 |
5118 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
5122 |
5893 |
- |
RS857 |
Unspecified |
scaffold1719 |
9565 |
9647 |
+ |
PL693 |
Unspecified |
scaffold1719 |
9579 |
9647 |
+ |
PL627 |
Unspecified |
scaffold1719 |
10840 |
11258 |
- |
RS1463 |
Unspecified |
scaffold1719 |
11341 |
11680 |
+ |
RS585 |
Unspecified |
scaffold1719 |
11712 |
11751 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
11951 |
12187 |
+ |
RS8058 |
Unspecified |
scaffold1719 |
12253 |
12698 |
+ |
PL416 |
Unspecified |
scaffold1719 |
12663 |
12969 |
+ |
RS6663 |
Unspecified |
scaffold1719 |
12865 |
12995 |
+ |
RS14250 |
Unspecified |
scaffold1719 |
13045 |
13187 |
+ |
RS14224 |
Unspecified |
scaffold1719 |
13465 |
13499 |
+ |
(ATTAA)n |
Simple_repeat |
scaffold1719 |
13675 |
13708 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
13813 |
13840 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
14256 |
15084 |
+ |
PL818 |
Unspecified |
scaffold1719 |
15087 |
15778 |
- |
Copia-4_GM-I |
LTR/Copia |
scaffold1719 |
15847 |
16047 |
- |
Copia-4_GM-I |
LTR/Copia |
scaffold1719 |
17315 |
17343 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
17503 |
19042 |
- |
Copia-23_ST-I |
LTR/Copia |
scaffold1719 |
19065 |
19353 |
+ |
RS10147 |
Unspecified |
scaffold1719 |
19388 |
20319 |
- |
Copia-23_ST-I |
LTR/Copia |
scaffold1719 |
20399 |
20725 |
- |
Copia-23_ST-I |
LTR/Copia |
scaffold1719 |
21291 |
21857 |
- |
Copia-23_ST-I |
LTR/Copia |
scaffold1719 |
22117 |
22127 |
+ |
(GAAGACA)n |
Simple_repeat |
scaffold1719 |
22128 |
22156 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
22157 |
22172 |
+ |
(GAAGACA)n |
Simple_repeat |
scaffold1719 |
22548 |
22649 |
- |
RS11779 |
Unspecified |
scaffold1719 |
22633 |
23035 |
- |
RS2837 |
Unspecified |
scaffold1719 |
22739 |
23152 |
+ |
PL818 |
Unspecified |
scaffold1719 |
23151 |
23648 |
+ |
PL738 |
Unspecified |
scaffold1719 |
23646 |
23818 |
+ |
PL818 |
Unspecified |
scaffold1719 |
23920 |
24100 |
+ |
RS11145 |
Unspecified |
scaffold1719 |
24076 |
24217 |
+ |
RS13435 |
Unspecified |
scaffold1719 |
24137 |
24374 |
+ |
RS8058 |
Unspecified |
scaffold1719 |
24382 |
24542 |
+ |
RS8058 |
Unspecified |
scaffold1719 |
28547 |
28696 |
+ |
RS9333 |
Unspecified |
scaffold1719 |
29083 |
29148 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
29957 |
30105 |
+ |
PL416 |
Unspecified |
scaffold1719 |
30489 |
30784 |
+ |
RS8456 |
Unspecified |
scaffold1719 |
31256 |
31639 |
+ |
RS4591 |
Unspecified |
scaffold1719 |
31475 |
31752 |
+ |
RS6582 |
Unspecified |
scaffold1719 |
32734 |
33705 |
+ |
Copia-96_GM-I |
LTR/Copia |
scaffold1719 |
34669 |
34781 |
+ |
RS2099 |
Unspecified |
scaffold1719 |
34803 |
34846 |
+ |
(TCA)n |
Simple_repeat |
scaffold1719 |
35334 |
35456 |
+ |
RS2099 |
Unspecified |
scaffold1719 |
36306 |
36435 |
+ |
RS10258 |
Unspecified |
scaffold1719 |
36498 |
36730 |
+ |
RS4323 |
Unspecified |
scaffold1719 |
36964 |
37361 |
+ |
RS12890 |
Unspecified |
scaffold1719 |
37372 |
37738 |
+ |
RS12306 |
Unspecified |
scaffold1719 |
37813 |
37956 |
+ |
RS9501 |
Unspecified |
scaffold1719 |
38235 |
38295 |
+ |
(TTTA)n |
Simple_repeat |
scaffold1719 |
38582 |
38684 |
- |
RS10164 |
Unspecified |
scaffold1719 |
39445 |
39782 |
+ |
RS606 |
Unspecified |
scaffold1719 |
39806 |
39900 |
+ |
RS11288 |
Unspecified |
scaffold1719 |
41635 |
41661 |
+ |
(GAAATT)n |
Simple_repeat |
scaffold1719 |
42474 |
42615 |
+ |
RS13435 |
Unspecified |
scaffold1719 |
42955 |
43008 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
43481 |
44062 |
+ |
PL594 |
Unspecified |
scaffold1719 |
44637 |
44749 |
+ |
RS9333 |
Unspecified |
scaffold1719 |
44944 |
45261 |
+ |
RS13150 |
Unspecified |
scaffold1719 |
45392 |
45653 |
+ |
RS14187 |
Unspecified |
scaffold1719 |
45933 |
45965 |
+ |
(TTTG)n |
Simple_repeat |
scaffold1719 |
46012 |
46293 |
+ |
RS14677 |
Unspecified |
scaffold1719 |
46312 |
46455 |
+ |
RS7886 |
Unspecified |
scaffold1719 |
46652 |
46725 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold1719 |
46876 |
46926 |
+ |
(ATTTA)n |
Simple_repeat |
scaffold1719 |
47261 |
47578 |
+ |
RS10201 |
Unspecified |
scaffold1719 |
47870 |
48505 |
+ |
PL416 |
Unspecified |
scaffold1719 |
48470 |
48783 |
+ |
RS6663 |
Unspecified |
scaffold1719 |
48679 |
48809 |
+ |
RS14250 |
Unspecified |
scaffold1719 |
48859 |
49001 |
+ |
RS14224 |
Unspecified |
scaffold1719 |
49247 |
49284 |
+ |
(TTTTA)n |
Simple_repeat |
scaffold1719 |
49733 |
49755 |
+ |
(AAG)n |
Simple_repeat |
scaffold1719 |
49830 |
49883 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
49957 |
49994 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
50077 |
50170 |
+ |
RS2764 |
Unspecified |
scaffold1719 |
50729 |
50775 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
51088 |
51114 |
+ |
(TAATT)n |
Simple_repeat |
scaffold1719 |
51204 |
51405 |
+ |
RS3687 |
Unspecified |
scaffold1719 |
51822 |
51947 |
+ |
RS8312 |
Unspecified |
scaffold1719 |
51867 |
51908 |
+ |
RS439 |
Unspecified |
scaffold1719 |
51867 |
51927 |
- |
RS8312 |
Unspecified |
scaffold1719 |
52297 |
52446 |
+ |
RS8312 |
Unspecified |
scaffold1719 |
52348 |
52849 |
- |
RS439 |
Unspecified |
scaffold1719 |
53090 |
53136 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
53569 |
53743 |
- |
RS13085 |
Unspecified |
scaffold1719 |
53719 |
53860 |
+ |
RS13435 |
Unspecified |
scaffold1719 |
53780 |
54017 |
+ |
RS8058 |
Unspecified |
scaffold1719 |
54025 |
54115 |
+ |
RS8058 |
Unspecified |
scaffold1719 |
56053 |
56088 |
+ |
Helitron-2_PTr |
RC/Helitron |
scaffold1719 |
58250 |
58268 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
58520 |
58670 |
+ |
RS9333 |
Unspecified |
scaffold1719 |
59132 |
59204 |
+ |
RS10201 |
Unspecified |
scaffold1719 |
59473 |
59621 |
+ |
PL416 |
Unspecified |
scaffold1719 |
59829 |
59900 |
+ |
PL701 |
Unspecified |
scaffold1719 |
60004 |
60299 |
+ |
RS8456 |
Unspecified |
scaffold1719 |
60787 |
61172 |
+ |
RS4591 |
Unspecified |
scaffold1719 |
61007 |
61315 |
+ |
RS6582 |
Unspecified |
scaffold1719 |
61353 |
61472 |
+ |
RS11288 |
Unspecified |
scaffold1719 |
63224 |
63257 |
+ |
(TGAAAT)n |
Simple_repeat |
scaffold1719 |
63426 |
63462 |
+ |
(TTGACTC)n |
Simple_repeat |
scaffold1719 |
64084 |
64225 |
+ |
RS13435 |
Unspecified |
scaffold1719 |
64575 |
64621 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
66272 |
66468 |
+ |
RS522 |
Unspecified |
scaffold1719 |
66352 |
66511 |
+ |
RS6556 |
Unspecified |
scaffold1719 |
72164 |
72178 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
72179 |
72229 |
+ |
(TTA)n |
Simple_repeat |
scaffold1719 |
72230 |
72302 |
+ |
(T)n |
Simple_repeat |
scaffold1719 |
79263 |
79300 |
+ |
(AAT)n |
Simple_repeat |
scaffold1719 |
80052 |
80087 |
+ |
(ATGTTGA)n |
Simple_repeat |
scaffold1719 |
80620 |
80641 |
+ |
(CGGC)n |
Simple_repeat |
scaffold1719 |
81584 |
81604 |
+ |
(TACA)n |
Simple_repeat |
scaffold1719 |
81931 |
82137 |
- |
RS1669 |
Unspecified |
scaffold1719 |
82600 |
82772 |
- |
DS-RICE3N |
DNA/hAT-Ac |
scaffold1719 |
82875 |
82967 |
- |
RS614 |
Unspecified |
scaffold1719 |
84180 |
84198 |
+ |
(A)n |
Simple_repeat |
scaffold1719 |
85195 |
85333 |
- |
RS1812 |
Unspecified |
scaffold1719 |
85375 |
85636 |
+ |
RS365 |
Unspecified |
scaffold1719 |
85980 |
86015 |
+ |
RS16449 |
Unspecified |
scaffold1719 |
86023 |
86903 |
+ |
RS16449 |
Unspecified |
scaffold1719 |
86615 |
87174 |
+ |
PL624 |
Unspecified |
scaffold1719 |
87177 |
87229 |
+ |
(A)n |
Simple_repeat |
scaffold1719 |
87307 |
87350 |
+ |
(AATAA)n |
Simple_repeat |
scaffold1719 |
88184 |
88260 |
+ |
(TAT)n |
Simple_repeat |
scaffold1719 |
88475 |
88513 |
+ |
(AATAA)n |
Simple_repeat |
scaffold1719 |
88976 |
89004 |
+ |
(TATT)n |
Simple_repeat |
scaffold1719 |
89117 |
89192 |
- |
PL130 |
Unspecified |
scaffold1719 |
89131 |
89192 |
- |
RS29 |
Unspecified |
scaffold1719 |
91852 |
91900 |
+ |
A-rich |
Low_complexity |
scaffold1719 |
92063 |
92111 |
+ |
(ATCCGAA)n |
Simple_repeat |
scaffold1719 |
92146 |
92242 |
- |
hAT-17_ZM |
DNA/hAT-Ac |
scaffold1719 |
92243 |
92271 |
+ |
(TCGGATA)n |
Simple_repeat |
scaffold1719 |
92272 |
92316 |
- |
hAT-17_ZM |
DNA/hAT-Ac |
scaffold1719 |
92479 |
92519 |
+ |
(CACCGTG)n |
Simple_repeat |
scaffold1719 |
92865 |
92925 |
+ |
(GATATCC)n |
Simple_repeat |
scaffold1719 |
94717 |
94736 |
+ |
(AAC)n |
Simple_repeat |
scaffold1719 |
95905 |
97241 |
+ |
Gypsy-3_Pru-I |
LTR/Gypsy |
scaffold1719 |
97916 |
98292 |
+ |
RTIP1_I-int |
LTR/Gypsy |
scaffold1719 |
98413 |
98526 |
+ |
RTIP1_I-int |
LTR/Gypsy |
scaffold1719 |
98963 |
98986 |
+ |
Copia-85_ST-I |
LTR/Copia |
scaffold1719 |
98987 |
99054 |
+ |
ATGP5A_I-int |
LTR/Gypsy |
scaffold1719 |
99055 |
99082 |
+ |
Copia-85_ST-I |
LTR/Copia |
scaffold1719 |
99331 |
99468 |
+ |
RS314 |
Unspecified |
scaffold1719 |
102350 |
102481 |
+ |
PL904 |
Unspecified |
scaffold1719 |
102819 |
103192 |
+ |
RS8469 |
Unspecified |
scaffold1719 |
106545 |
106852 |
- |
RS29 |
Unspecified |