scaffold17433 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold17433 |
132 |
520 |
- |
RS7320 |
Unspecified |
| scaffold17433 |
533 |
976 |
+ |
RS8868 |
Unspecified |
| scaffold17433 |
1107 |
1199 |
+ |
RS8868 |
Unspecified |
| scaffold17433 |
1129 |
1199 |
+ |
RS7470 |
Unspecified |
| scaffold17433 |
1266 |
1363 |
+ |
RS4475 |
Unspecified |
| scaffold17433 |
2129 |
2224 |
+ |
(ATATCC)n |
Simple_repeat |
| scaffold17433 |
3222 |
3289 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
3509 |
3582 |
+ |
(ACAAGC)n |
Simple_repeat |
| scaffold17433 |
4064 |
4337 |
+ |
RS106 |
Unspecified |
| scaffold17433 |
4275 |
4347 |
+ |
RS1351 |
Unspecified |
| scaffold17433 |
4574 |
4794 |
- |
RS347 |
Unspecified |
| scaffold17433 |
5304 |
5480 |
- |
RS5 |
Unspecified |
| scaffold17433 |
6525 |
6584 |
+ |
(ATATTT)n |
Simple_repeat |
| scaffold17433 |
7250 |
7266 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
7299 |
7334 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold17433 |
7538 |
7605 |
+ |
(GTT)n |
Simple_repeat |
| scaffold17433 |
7606 |
7622 |
+ |
(TCG)n |
Simple_repeat |
| scaffold17433 |
8714 |
8982 |
- |
RS356 |
Unspecified |
| scaffold17433 |
9040 |
9243 |
+ |
RS917 |
Unspecified |
| scaffold17433 |
9063 |
9248 |
+ |
RS6081 |
Unspecified |
| scaffold17433 |
9555 |
9828 |
- |
RS356 |
Unspecified |
| scaffold17433 |
10238 |
10270 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold17433 |
10528 |
10556 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
10570 |
10666 |
- |
RS15235 |
Unspecified |
| scaffold17433 |
10716 |
10868 |
- |
RS3868 |
Unspecified |
| scaffold17433 |
10738 |
10863 |
- |
RS13485 |
Unspecified |
| scaffold17433 |
10779 |
10890 |
- |
RS1107 |
Unspecified |
| scaffold17433 |
10934 |
11416 |
+ |
PL82 |
Unspecified |
| scaffold17433 |
11655 |
11678 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
12178 |
12223 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
12224 |
12251 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
12347 |
12495 |
+ |
RS54 |
Unspecified |
| scaffold17433 |
12497 |
12753 |
+ |
RS18232 |
Unspecified |
| scaffold17433 |
12615 |
12822 |
+ |
PL477 |
Unspecified |
| scaffold17433 |
14337 |
14679 |
+ |
RS1919 |
Unspecified |
| scaffold17433 |
14682 |
14761 |
+ |
RS115 |
Unspecified |
| scaffold17433 |
14781 |
14849 |
+ |
RS115 |
Unspecified |
| scaffold17433 |
14849 |
15303 |
- |
RS4864 |
Unspecified |
| scaffold17433 |
17418 |
17673 |
+ |
RS17 |
Unspecified |
| scaffold17433 |
17700 |
17738 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
17992 |
18085 |
+ |
RS5457 |
Unspecified |
| scaffold17433 |
18082 |
18170 |
+ |
RS4475 |
Unspecified |
| scaffold17433 |
18105 |
18178 |
+ |
RS12885 |
Unspecified |
| scaffold17433 |
18245 |
18275 |
+ |
(AAT)n |
Simple_repeat |
| scaffold17433 |
18682 |
18868 |
+ |
RS6644 |
Unspecified |
| scaffold17433 |
20352 |
20622 |
+ |
RS1 |
Unspecified |
| scaffold17433 |
22490 |
22543 |
- |
RS17 |
Unspecified |
| scaffold17433 |
22492 |
22574 |
- |
RS17638 |
Unspecified |
| scaffold17433 |
24481 |
24501 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
25130 |
25229 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold17433 |
27653 |
28232 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold17433 |
28234 |
28915 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold17433 |
28909 |
29180 |
- |
Copia-89_VV-I |
LTR/Copia |
| scaffold17433 |
32901 |
33107 |
+ |
RS2105 |
Unspecified |
| scaffold17433 |
33108 |
33274 |
- |
RS549 |
Unspecified |
| scaffold17433 |
33658 |
33690 |
+ |
(AAT)n |
Simple_repeat |
| scaffold17433 |
35667 |
35833 |
- |
PL818 |
Unspecified |
| scaffold17433 |
35668 |
35857 |
- |
RS95 |
Unspecified |
| scaffold17433 |
36575 |
37013 |
- |
L1-5_STu |
LINE/L1 |
| scaffold17433 |
37160 |
37767 |
- |
L1-5_STu |
LINE/L1 |
| scaffold17433 |
40305 |
40343 |
+ |
(CCG)n |
Simple_repeat |
| scaffold17433 |
40634 |
40713 |
+ |
(TGTTGAT)n |
Simple_repeat |
| scaffold17433 |
40964 |
41069 |
+ |
RS2542 |
Unspecified |
| scaffold17433 |
41093 |
41283 |
- |
RS6187 |
Unspecified |
| scaffold17433 |
41467 |
42013 |
+ |
RS2898 |
Unspecified |
| scaffold17433 |
42037 |
42233 |
+ |
RS526 |
Unspecified |
| scaffold17433 |
42371 |
43363 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold17433 |
42750 |
43359 |
+ |
RIRE1_I-int |
LTR/Copia |
| scaffold17433 |
43372 |
43415 |
+ |
RS526 |
Unspecified |
| scaffold17433 |
43415 |
43703 |
+ |
RS2837 |
Unspecified |
| scaffold17433 |
44422 |
44503 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
44580 |
44616 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold17433 |
44617 |
44627 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
44941 |
45766 |
- |
Copia-25_ST-I |
LTR/Copia |
| scaffold17433 |
45790 |
46841 |
+ |
RS836 |
Unspecified |
| scaffold17433 |
46842 |
47862 |
+ |
PL599 |
Unspecified |
| scaffold17433 |
47853 |
48242 |
- |
PL879 |
Unspecified |
| scaffold17433 |
48243 |
48424 |
+ |
RS836 |
Unspecified |
| scaffold17433 |
48415 |
48510 |
- |
Copia-37_ST-I |
LTR/Copia |
| scaffold17433 |
48523 |
49075 |
- |
Copia-30_ST-I |
LTR/Copia |
| scaffold17433 |
49468 |
49516 |
- |
Copia-37_ST-I |
LTR/Copia |
| scaffold17433 |
49601 |
49981 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold17433 |
50266 |
50365 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
53227 |
53284 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold17433 |
53968 |
54001 |
+ |
(TTA)n |
Simple_repeat |
| scaffold17433 |
54128 |
54180 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold17433 |
58657 |
58714 |
+ |
(GTTGA)n |
Simple_repeat |
| scaffold17433 |
59398 |
59431 |
+ |
(TTA)n |
Simple_repeat |
| scaffold17433 |
59558 |
59610 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold17433 |
60416 |
60436 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
60638 |
60821 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold17433 |
61001 |
61227 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold17433 |
61399 |
61456 |
+ |
(GTGCGG)n |
Simple_repeat |
| scaffold17433 |
65440 |
65502 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
65676 |
65710 |
+ |
(TTG)n |
Simple_repeat |
| scaffold17433 |
65753 |
65792 |
+ |
(GACGAG)n |
Simple_repeat |
| scaffold17433 |
66271 |
66289 |
+ |
(GTC)n |
Simple_repeat |
| scaffold17433 |
66567 |
67008 |
+ |
PL400 |
Unspecified |
| scaffold17433 |
67304 |
67436 |
- |
RS2147 |
Unspecified |
| scaffold17433 |
68274 |
68802 |
+ |
PL28 |
Unspecified |
| scaffold17433 |
69101 |
69359 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold17433 |
69638 |
69726 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold17433 |
69727 |
69838 |
+ |
LTR2-ZM_LTR |
LTR |
| scaffold17433 |
70151 |
70224 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
70524 |
70562 |
+ |
(TTT)n |
Simple_repeat |
| scaffold17433 |
70831 |
70910 |
- |
PL289 |
Unspecified |
| scaffold17433 |
71006 |
71281 |
+ |
RS1943 |
Unspecified |
| scaffold17433 |
71750 |
71837 |
+ |
(ATTAATA)n |
Simple_repeat |
| scaffold17433 |
72328 |
72381 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
72758 |
72896 |
- |
PL296 |
Unspecified |
| scaffold17433 |
72869 |
72939 |
- |
PL296 |
Unspecified |
| scaffold17433 |
72921 |
73109 |
- |
PL296 |
Unspecified |
| scaffold17433 |
74563 |
74796 |
- |
RS18 |
Unspecified |
| scaffold17433 |
75202 |
75309 |
+ |
RS4735 |
Unspecified |
| scaffold17433 |
75981 |
76288 |
+ |
RS586 |
Unspecified |
| scaffold17433 |
75981 |
76198 |
- |
RS356 |
Unspecified |
| scaffold17433 |
76966 |
76989 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
77539 |
78051 |
- |
PL777 |
Unspecified |
| scaffold17433 |
79069 |
79092 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
79199 |
79476 |
+ |
RS17600 |
Unspecified |
| scaffold17433 |
79804 |
79852 |
- |
ATRAN |
DNA? |
| scaffold17433 |
80686 |
80949 |
- |
RS109 |
Unspecified |
| scaffold17433 |
81196 |
81612 |
- |
RS458 |
Unspecified |
| scaffold17433 |
81791 |
81902 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17433 |
81791 |
82135 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17433 |
81887 |
82135 |
+ |
RS877 |
Unspecified |
| scaffold17433 |
82232 |
82250 |
+ |
(A)n |
Simple_repeat |
| scaffold17433 |
82254 |
82334 |
- |
RS9298 |
Unspecified |
| scaffold17433 |
82522 |
82545 |
+ |
(CT)n |
Simple_repeat |
| scaffold17433 |
82596 |
82631 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold17433 |
82820 |
82994 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17433 |
83002 |
83660 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold17433 |
83002 |
83074 |
+ |
(TTAATT)n |
Simple_repeat |
| scaffold17433 |
83066 |
83660 |
+ |
RS132 |
Unspecified |
| scaffold17433 |
84541 |
84692 |
- |
PL565 |
Unspecified |
| scaffold17433 |
85413 |
85455 |
+ |
(AACAAT)n |
Simple_repeat |
| scaffold17433 |
86451 |
86586 |
+ |
RS1172 |
Unspecified |
| scaffold17433 |
86474 |
86738 |
+ |
RS356 |
Unspecified |
| scaffold17433 |
86915 |
86943 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
87524 |
87568 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
89752 |
90031 |
+ |
GA-rich |
Low_complexity |
| scaffold17433 |
89944 |
90031 |
+ |
GA-rich |
Low_complexity |
| scaffold17433 |
91209 |
91257 |
+ |
(ATA)n |
Simple_repeat |
| scaffold17433 |
91259 |
91308 |
+ |
(TTTGATT)n |
Simple_repeat |
| scaffold17433 |
91309 |
91318 |
+ |
(TTTGGTA)n |
Simple_repeat |
| scaffold17433 |
91393 |
91435 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17433 |
94425 |
94457 |
+ |
(TTTG)n |
Simple_repeat |
| scaffold17433 |
95683 |
95948 |
+ |
RS26 |
Unspecified |
| scaffold17433 |
96150 |
96172 |
+ |
(ATTG)n |
Simple_repeat |
| scaffold17433 |
97127 |
97236 |
- |
RS6250 |
Unspecified |
| scaffold17433 |
97339 |
97377 |
+ |
(AATA)n |
Simple_repeat |
| scaffold17433 |
97405 |
97710 |
- |
RS4115 |
Unspecified |
| scaffold17433 |
97732 |
97851 |
- |
RS1774 |
Unspecified |
| scaffold17433 |
97856 |
97929 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
98022 |
98198 |
+ |
RS5 |
Unspecified |
| scaffold17433 |
98511 |
98531 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
98575 |
98822 |
+ |
RS1854 |
Unspecified |
| scaffold17433 |
99478 |
99549 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
100683 |
100715 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
100736 |
100777 |
+ |
(ACC)n |
Simple_repeat |
| scaffold17433 |
102192 |
102219 |
+ |
(T)n |
Simple_repeat |
| scaffold17433 |
102887 |
102909 |
+ |
(ACA)n |
Simple_repeat |
| scaffold17433 |
105931 |
105960 |
+ |
A-rich |
Low_complexity |
| scaffold17433 |
108208 |
108381 |
- |
RS233 |
Unspecified |
| scaffold17433 |
111219 |
111354 |
+ |
TRAMET1 |
DNA/TcMar-Stowaway |
| scaffold17433 |
111993 |
112051 |
+ |
(TTTAC)n |
Simple_repeat |
| scaffold17433 |
112128 |
112201 |
+ |
(TATAC)n |
Simple_repeat |
| scaffold17433 |
112413 |
112449 |
+ |
(TTTTTA)n |
Simple_repeat |
| scaffold17433 |
113018 |
113133 |
- |
RS7411 |
Unspecified |
| scaffold17433 |
113527 |
113653 |
- |
RS9563 |
Unspecified |
| scaffold17433 |
114357 |
114463 |
- |
RS11783 |
Unspecified |
| scaffold17433 |
114409 |
114515 |
- |
RS11783 |
Unspecified |
| scaffold17433 |
115312 |
115481 |
+ |
RS3184 |
Unspecified |
| scaffold17433 |
116013 |
116057 |
+ |
(ATTGTA)n |
Simple_repeat |
| scaffold17433 |
116395 |
116475 |
+ |
(ATATA)n |
Simple_repeat |
| scaffold17433 |
116618 |
116663 |
+ |
A-rich |
Low_complexity |