scaffold17595 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold17595 |
1 |
32 |
+ |
(A)n |
Simple_repeat |
| scaffold17595 |
169 |
186 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
226 |
387 |
+ |
(ACAACA)n |
Simple_repeat |
| scaffold17595 |
1090 |
1133 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
2303 |
2319 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
3348 |
3755 |
- |
PL947 |
Unspecified |
| scaffold17595 |
7869 |
7899 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
10825 |
10881 |
+ |
(TAT)n |
Simple_repeat |
| scaffold17595 |
11882 |
12200 |
- |
RS5106 |
Unspecified |
| scaffold17595 |
12390 |
12441 |
+ |
(TTAGTC)n |
Simple_repeat |
| scaffold17595 |
13357 |
13564 |
+ |
SHAMET |
DNA/TcMar-Stowaway |
| scaffold17595 |
13668 |
13699 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold17595 |
13807 |
14328 |
+ |
PL617 |
Unspecified |
| scaffold17595 |
14386 |
14413 |
+ |
(TTTCA)n |
Simple_repeat |
| scaffold17595 |
15002 |
15060 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17595 |
15776 |
15813 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold17595 |
15814 |
15858 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
15859 |
16022 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold17595 |
15955 |
16023 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
16633 |
16721 |
- |
VHARB4_VV |
DNA/PIF-Harbinger |
| scaffold17595 |
16725 |
16754 |
+ |
A-rich |
Low_complexity |
| scaffold17595 |
16946 |
17588 |
+ |
RS112 |
Unspecified |
| scaffold17595 |
17758 |
18000 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold17595 |
18080 |
18775 |
- |
RS270 |
Unspecified |
| scaffold17595 |
18433 |
19038 |
- |
RS917 |
Unspecified |
| scaffold17595 |
19171 |
19228 |
- |
Gypsy-13_SMo-LTR |
LTR/Gypsy |
| scaffold17595 |
19374 |
19407 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold17595 |
19442 |
19464 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
19874 |
19948 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold17595 |
20357 |
20427 |
- |
PL941 |
Unspecified |
| scaffold17595 |
20435 |
21118 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold17595 |
20460 |
21084 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold17595 |
24519 |
25039 |
+ |
PL814 |
Unspecified |
| scaffold17595 |
25264 |
25383 |
+ |
RS41 |
Unspecified |
| scaffold17595 |
25951 |
25973 |
+ |
(TCT)n |
Simple_repeat |
| scaffold17595 |
27115 |
27147 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
29816 |
29855 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
31484 |
31735 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold17595 |
31865 |
31886 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
32405 |
32499 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold17595 |
34947 |
34981 |
+ |
(CCTCAG)n |
Simple_repeat |
| scaffold17595 |
37085 |
37182 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold17595 |
37249 |
38553 |
- |
gypsy |
gypsy(TransposonPSI) |
| scaffold17595 |
37547 |
38198 |
- |
Gypsy-5_Pru-I |
LTR/Gypsy |
| scaffold17595 |
39157 |
39199 |
+ |
(TCAT)n |
Simple_repeat |
| scaffold17595 |
39596 |
40176 |
+ |
Copia-1_ST-I |
LTR/Copia |
| scaffold17595 |
40823 |
40881 |
+ |
Copia-1_ST-I |
LTR/Copia |
| scaffold17595 |
40917 |
40969 |
+ |
Copia-1_ST-I |
LTR/Copia |
| scaffold17595 |
41144 |
41662 |
+ |
Copia-1_ST-I |
LTR/Copia |
| scaffold17595 |
41667 |
42245 |
+ |
RS5041 |
Unspecified |
| scaffold17595 |
42985 |
43957 |
+ |
Copia-48_ST-I |
LTR/Copia |
| scaffold17595 |
44048 |
44093 |
+ |
(TCAAT)n |
Simple_repeat |
| scaffold17595 |
45173 |
45213 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
46166 |
46260 |
+ |
Copia-53_VV-I |
LTR/Copia |
| scaffold17595 |
46321 |
46508 |
+ |
RS5318 |
Unspecified |
| scaffold17595 |
46758 |
46819 |
+ |
(GATTA)n |
Simple_repeat |
| scaffold17595 |
46834 |
47379 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold17595 |
47023 |
47216 |
+ |
SHALINE16_MT |
LINE/L1 |
| scaffold17595 |
47967 |
48030 |
+ |
A-rich |
Low_complexity |
| scaffold17595 |
48032 |
48085 |
+ |
(T)n |
Simple_repeat |
| scaffold17595 |
48475 |
48738 |
+ |
RS356 |
Unspecified |
| scaffold17595 |
48793 |
48881 |
+ |
(A)n |
Simple_repeat |
| scaffold17595 |
49548 |
49704 |
+ |
RS6387 |
Unspecified |
| scaffold17595 |
50490 |
50521 |
+ |
(AATGGT)n |
Simple_repeat |
| scaffold17595 |
50820 |
50872 |
+ |
(TTGT)n |
Simple_repeat |
| scaffold17595 |
51076 |
51539 |
+ |
RS2172 |
Unspecified |
| scaffold17595 |
51705 |
51742 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold17595 |
51811 |
51849 |
+ |
(GTGCTTTG)n |
Simple_repeat |
| scaffold17595 |
52251 |
52542 |
- |
RS7860 |
Unspecified |
| scaffold17595 |
54136 |
54205 |
- |
PL340 |
Unspecified |
| scaffold17595 |
54205 |
54263 |
+ |
RS805 |
Unspecified |
| scaffold17595 |
54336 |
54708 |
+ |
RS805 |
Unspecified |
| scaffold17595 |
55290 |
56411 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold17595 |
55547 |
56410 |
+ |
Copia-53_VV-I |
LTR/Copia |
| scaffold17595 |
56408 |
56773 |
+ |
RS805 |
Unspecified |
| scaffold17595 |
56803 |
56849 |
+ |
(TTTGCTG)n |
Simple_repeat |
| scaffold17595 |
56951 |
57028 |
+ |
RS1516 |
Unspecified |
| scaffold17595 |
57041 |
57145 |
+ |
RS4 |
Unspecified |
| scaffold17595 |
57382 |
57427 |
+ |
(CTTCTT)n |
Simple_repeat |
| scaffold17595 |
57534 |
57578 |
+ |
(TTCTTC)n |
Simple_repeat |
| scaffold17595 |
57779 |
57822 |
+ |
A-rich |
Low_complexity |
| scaffold17595 |
59234 |
59353 |
- |
RS12422 |
Unspecified |
| scaffold17595 |
60130 |
60149 |
+ |
(A)n |
Simple_repeat |
| scaffold17595 |
60270 |
60389 |
- |
RS12422 |
Unspecified |
| scaffold17595 |
61166 |
61192 |
+ |
(A)n |
Simple_repeat |
| scaffold17595 |
62127 |
62156 |
+ |
A-rich |
Low_complexity |
| scaffold17595 |
62552 |
62707 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold17595 |
62715 |
63638 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold17595 |
63767 |
63917 |
- |
RS6916 |
Unspecified |
| scaffold17595 |
64388 |
64500 |
+ |
RS1324 |
Unspecified |