scaffold17610 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold17610 |
1 |
171 |
+ |
RS3060 |
Unspecified |
| scaffold17610 |
228 |
290 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold17610 |
579 |
688 |
+ |
(AATTTA)n |
Simple_repeat |
| scaffold17610 |
2967 |
3430 |
+ |
RS5078 |
Unspecified |
| scaffold17610 |
4056 |
4176 |
+ |
(TTCTTA)n |
Simple_repeat |
| scaffold17610 |
4741 |
4814 |
+ |
(TATTAAT)n |
Simple_repeat |
| scaffold17610 |
4781 |
4831 |
+ |
A-rich |
Low_complexity |
| scaffold17610 |
5249 |
5290 |
+ |
(TAATTTA)n |
Simple_repeat |
| scaffold17610 |
5495 |
5538 |
+ |
A-rich |
Low_complexity |
| scaffold17610 |
5587 |
5623 |
+ |
(TAT)n |
Simple_repeat |
| scaffold17610 |
5934 |
6022 |
+ |
IFG7_I-int |
LTR/Gypsy |
| scaffold17610 |
6158 |
6240 |
+ |
(TATTAAT)n |
Simple_repeat |
| scaffold17610 |
6307 |
6368 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold17610 |
6368 |
6410 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold17610 |
6980 |
7032 |
+ |
(TAT)n |
Simple_repeat |
| scaffold17610 |
7345 |
7433 |
+ |
IFG7_I-int |
LTR/Gypsy |
| scaffold17610 |
7503 |
8342 |
+ |
RS514 |
Unspecified |
| scaffold17610 |
7899 |
8488 |
+ |
PL445 |
Unspecified |
| scaffold17610 |
7961 |
8683 |
- |
PL920 |
Unspecified |
| scaffold17610 |
8709 |
10751 |
+ |
RS254 |
Unspecified |
| scaffold17610 |
8876 |
8978 |
- |
RS868 |
Unspecified |
| scaffold17610 |
9925 |
9946 |
+ |
(T)n |
Simple_repeat |
| scaffold17610 |
10978 |
11022 |
+ |
A-rich |
Low_complexity |
| scaffold17610 |
11123 |
12280 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold17610 |
12329 |
12413 |
- |
RS911 |
Unspecified |
| scaffold17610 |
12598 |
12667 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold17610 |
12855 |
13442 |
- |
RS344 |
Unspecified |
| scaffold17610 |
14946 |
15076 |
+ |
RS398 |
Unspecified |
| scaffold17610 |
14998 |
15076 |
- |
RS7400 |
Unspecified |
| scaffold17610 |
15035 |
15268 |
+ |
RS10815 |
Unspecified |
| scaffold17610 |
15269 |
15665 |
+ |
RS8672 |
Unspecified |
| scaffold17610 |
16138 |
17426 |
- |
L1-1_GM |
LINE/L1 |
| scaffold17610 |
17495 |
18375 |
+ |
RS869 |
Unspecified |
| scaffold17610 |
18510 |
18557 |
+ |
(ATGTTGT)n |
Simple_repeat |
| scaffold17610 |
18872 |
18902 |
+ |
(GTTTCGT)n |
Simple_repeat |
| scaffold17610 |
19408 |
19481 |
- |
VLINE5_VV |
LINE/L1 |
| scaffold17610 |
19506 |
19874 |
+ |
RS10815 |
Unspecified |
| scaffold17610 |
21150 |
21209 |
+ |
(ACACAA)n |
Simple_repeat |
| scaffold17610 |
21511 |
21746 |
- |
RS2778 |
Unspecified |
| scaffold17610 |
22927 |
23403 |
+ |
RS8436 |
Unspecified |
| scaffold17610 |
23657 |
23950 |
+ |
RS6871 |
Unspecified |
| scaffold17610 |
25829 |
25861 |
+ |
(TCA)n |
Simple_repeat |
| scaffold17610 |
26283 |
26319 |
+ |
A-rich |
Low_complexity |
| scaffold17610 |
26327 |
26354 |
- |
Gypsy-127_SBi-I |
LTR/Gypsy |
| scaffold17610 |
27499 |
27716 |
- |
RS530 |
Unspecified |
| scaffold17610 |
28553 |
28733 |
+ |
(CAGCCT)n |
Simple_repeat |
| scaffold17610 |
30552 |
30599 |
+ |
(ATTTTGA)n |
Simple_repeat |
| scaffold17610 |
30798 |
30933 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold17610 |
31368 |
31451 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold17610 |
31741 |
31772 |
+ |
A-rich |
Low_complexity |
| scaffold17610 |
32051 |
32101 |
+ |
(CTTATA)n |
Simple_repeat |
| scaffold17610 |
32201 |
32230 |
+ |
(ATT)n |
Simple_repeat |
| scaffold17610 |
32354 |
32961 |
- |
RS69 |
Unspecified |
| scaffold17610 |
32991 |
33034 |
+ |
(TTGTAT)n |
Simple_repeat |
| scaffold17610 |
33162 |
34031 |
- |
PL532 |
Unspecified |
| scaffold17610 |
34429 |
35045 |
- |
RS1027 |
Unspecified |
| scaffold17610 |
35656 |
36033 |
+ |
RS2911 |
Unspecified |