scaffold18223 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18223 |
1 |
790 |
+ |
RS57 |
Unspecified |
| scaffold18223 |
378 |
937 |
- |
PL918 |
Unspecified |
| scaffold18223 |
1111 |
1153 |
+ |
(TCAA)n |
Simple_repeat |
| scaffold18223 |
3141 |
3561 |
+ |
Gypsy-133_GM-I |
LTR/Gypsy |
| scaffold18223 |
3356 |
3404 |
+ |
RS2963 |
Unspecified |
| scaffold18223 |
4206 |
4230 |
+ |
(GTC)n |
Simple_repeat |
| scaffold18223 |
4232 |
4337 |
+ |
(GTT)n |
Simple_repeat |
| scaffold18223 |
4338 |
4367 |
+ |
(TTA)n |
Simple_repeat |
| scaffold18223 |
4368 |
4381 |
+ |
(GTT)n |
Simple_repeat |
| scaffold18223 |
4394 |
4463 |
+ |
GA-rich |
Low_complexity |
| scaffold18223 |
4560 |
4607 |
+ |
(TA)n |
Simple_repeat |
| scaffold18223 |
5028 |
5120 |
- |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold18223 |
5340 |
5466 |
+ |
A-rich |
Low_complexity |
| scaffold18223 |
6485 |
6573 |
+ |
(T)n |
Simple_repeat |
| scaffold18223 |
6572 |
7441 |
+ |
RS57 |
Unspecified |
| scaffold18223 |
12374 |
12405 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18223 |
12672 |
12689 |
+ |
(A)n |
Simple_repeat |
| scaffold18223 |
13029 |
13108 |
+ |
Gypsy-13_TA-I |
LTR/Gypsy |
| scaffold18223 |
13111 |
13160 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold18223 |
13452 |
13550 |
+ |
A-rich |
Low_complexity |
| scaffold18223 |
13749 |
13784 |
+ |
(TCT)n |
Simple_repeat |
| scaffold18223 |
13789 |
13818 |
+ |
(AAC)n |
Simple_repeat |
| scaffold18223 |
13819 |
13871 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18223 |
13872 |
13935 |
+ |
(AAC)n |
Simple_repeat |
| scaffold18223 |
14486 |
14717 |
- |
RS2766 |
Unspecified |
| scaffold18223 |
14878 |
14923 |
+ |
A-rich |
Low_complexity |
| scaffold18223 |
15150 |
15333 |
- |
PL369 |
Unspecified |
| scaffold18223 |
15184 |
15682 |
- |
PL344 |
Unspecified |
| scaffold18223 |
16102 |
16748 |
+ |
RS403 |
Unspecified |
| scaffold18223 |
16747 |
16827 |
+ |
RS403 |
Unspecified |
| scaffold18223 |
16828 |
17284 |
- |
RS604 |
Unspecified |
| scaffold18223 |
17286 |
17311 |
+ |
(TA)n |
Simple_repeat |
| scaffold18223 |
17504 |
17678 |
+ |
RS13071 |
Unspecified |
| scaffold18223 |
20214 |
20678 |
+ |
RS12652 |
Unspecified |
| scaffold18223 |
20729 |
20766 |
+ |
A-rich |
Low_complexity |
| scaffold18223 |
21117 |
21200 |
- |
RS2931 |
Unspecified |
| scaffold18223 |
21707 |
21938 |
- |
Copia2-LTR_VC |
Satellite |
| scaffold18223 |
21746 |
22080 |
- |
Novosib-6_CR |
DNA/Novosib |
| scaffold18223 |
22503 |
22581 |
- |
ATCopia24I |
LTR/Copia |
| scaffold18223 |
22743 |
22833 |
- |
EnSpm-34_SBi |
DNA/CMC-EnSpm |
| scaffold18223 |
22916 |
22984 |
- |
Gypsy-193_ZM-I |
LTR/Gypsy |
| scaffold18223 |
23033 |
23285 |
- |
RS6829 |
Unspecified |
| scaffold18223 |
23378 |
23624 |
- |
RS13680 |
Unspecified |
| scaffold18223 |
24911 |
25051 |
+ |
RS12163 |
Unspecified |
| scaffold18223 |
25197 |
25476 |
+ |
RS2478 |
Unspecified |
| scaffold18223 |
25885 |
25918 |
+ |
A-rich |
Low_complexity |
| scaffold18223 |
26547 |
26989 |
+ |
(T)n |
Simple_repeat |
| scaffold18223 |
26547 |
26564 |
+ |
(T)n |
Simple_repeat |
| scaffold18223 |
26561 |
26989 |
- |
RS9597 |
Unspecified |
| scaffold18223 |
26619 |
27126 |
+ |
RS1130 |
Unspecified |
| scaffold18223 |
27556 |
27597 |
+ |
(ACATC)n |
Simple_repeat |
| scaffold18223 |
27903 |
28101 |
- |
RS604 |
Unspecified |
| scaffold18223 |
29512 |
29568 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold18223 |
30191 |
30463 |
- |
RS4284 |
Unspecified |
| scaffold18223 |
30227 |
30463 |
- |
PL344 |
Unspecified |
| scaffold18223 |
30482 |
30608 |
- |
RS14 |
Unspecified |
| scaffold18223 |
30609 |
30695 |
- |
RS276 |
Unspecified |
| scaffold18223 |
30645 |
30822 |
+ |
PL251 |
Unspecified |
| scaffold18223 |
30693 |
31251 |
- |
RS57 |
Unspecified |
| scaffold18223 |
31382 |
31469 |
+ |
(CTAAGCA)n |
Simple_repeat |
| scaffold18223 |
31740 |
31870 |
+ |
PL918 |
Unspecified |
| scaffold18223 |
31770 |
31885 |
- |
RS57 |
Unspecified |
| scaffold18223 |
32107 |
32147 |
+ |
(AATCGAT)n |
Simple_repeat |
| scaffold18223 |
32278 |
32334 |
+ |
(CTA)n |
Simple_repeat |
| scaffold18223 |
32452 |
32497 |
+ |
(TCTTCA)n |
Simple_repeat |
| scaffold18223 |
32524 |
32563 |
+ |
(TTTAG)n |
Simple_repeat |
| scaffold18223 |
32943 |
32974 |
+ |
(AATAA)n |
Simple_repeat |
| scaffold18223 |
33765 |
33879 |
+ |
Copia10-VV_LTR |
LTR/Copia |
| scaffold18223 |
33852 |
33884 |
+ |
Copia-36_BD-I |
LTR/Copia |
| scaffold18223 |
33960 |
34865 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold18223 |
34196 |
34555 |
+ |
TORTL1 |
LTR/Copia |
| scaffold18223 |
34718 |
34823 |
+ |
TORTL1 |
LTR/Copia |
| scaffold18223 |
35283 |
35954 |
- |
RS4002 |
Unspecified |
| scaffold18223 |
35961 |
36411 |
+ |
Copia-104_GM-I |
LTR/Copia |
| scaffold18223 |
36557 |
36772 |
+ |
Copia-10_TC-I |
LTR/Copia |
| scaffold18223 |
39422 |
39757 |
+ |
PL896 |
Unspecified |
| scaffold18223 |
39740 |
40147 |
+ |
PL568 |
Unspecified |
| scaffold18223 |
40385 |
40482 |
+ |
Gypsy-29_PTr-LTR |
LTR/Gypsy |
| scaffold18223 |
40482 |
41313 |
- |
RS348 |
Unspecified |
| scaffold18223 |
41944 |
42290 |
- |
RS1196 |
Unspecified |
| scaffold18223 |
44297 |
44345 |
+ |
(ATGTGTT)n |
Simple_repeat |
| scaffold18223 |
44532 |
44562 |
+ |
GA-rich |
Low_complexity |
| scaffold18223 |
46481 |
47646 |
- |
RS3063 |
Unspecified |
| scaffold18223 |
49268 |
49332 |
- |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold18223 |
49456 |
50518 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold18223 |
50968 |
51180 |
- |
Gypsy2-SB_I-int |
LTR/Gypsy |
| scaffold18223 |
51172 |
51891 |
- |
Gypsy-23_VV-I |
LTR/Gypsy |