scaffold18252 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18252 |
423 |
480 |
- |
Ogre-PT3_I-int |
LTR/Gypsy |
| scaffold18252 |
2345 |
2766 |
- |
PL743 |
Unspecified |
| scaffold18252 |
2484 |
2571 |
+ |
(TTTTGT)n |
Simple_repeat |
| scaffold18252 |
3054 |
3159 |
+ |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold18252 |
3054 |
3278 |
+ |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold18252 |
3142 |
3278 |
+ |
RS11921 |
Unspecified |
| scaffold18252 |
3285 |
4772 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold18252 |
3616 |
4772 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold18252 |
5704 |
6002 |
- |
RS3897 |
Unspecified |
| scaffold18252 |
5860 |
6149 |
+ |
RS7731 |
Unspecified |
| scaffold18252 |
6469 |
8097 |
+ |
RS27 |
Unspecified |
| scaffold18252 |
9823 |
9873 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold18252 |
10204 |
10511 |
- |
RS646 |
Unspecified |
| scaffold18252 |
10511 |
10889 |
- |
RS265 |
Unspecified |
| scaffold18252 |
10932 |
11329 |
+ |
RS488 |
Unspecified |
| scaffold18252 |
11389 |
11496 |
- |
RS481 |
Unspecified |
| scaffold18252 |
11848 |
11895 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18252 |
11896 |
12069 |
- |
RS1440 |
Unspecified |
| scaffold18252 |
12246 |
12429 |
+ |
RS1440 |
Unspecified |
| scaffold18252 |
12430 |
12462 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18252 |
12735 |
12851 |
- |
RS317 |
Unspecified |
| scaffold18252 |
13247 |
13382 |
+ |
RS2666 |
Unspecified |
| scaffold18252 |
13449 |
13474 |
+ |
(T)n |
Simple_repeat |
| scaffold18252 |
13486 |
13544 |
+ |
(AATA)n |
Simple_repeat |
| scaffold18252 |
14047 |
14092 |
+ |
(TATTA)n |
Simple_repeat |
| scaffold18252 |
15336 |
15526 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
15476 |
15526 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
15628 |
15923 |
- |
RS592 |
Unspecified |
| scaffold18252 |
16540 |
16734 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold18252 |
16540 |
16572 |
+ |
(ATTTT)n |
Simple_repeat |
| scaffold18252 |
16561 |
16734 |
- |
RS1829 |
Unspecified |
| scaffold18252 |
16987 |
17015 |
+ |
(T)n |
Simple_repeat |
| scaffold18252 |
18085 |
18236 |
+ |
RS17378 |
Unspecified |
| scaffold18252 |
21568 |
21607 |
+ |
(TGTTTA)n |
Simple_repeat |
| scaffold18252 |
26050 |
26093 |
+ |
(TTACTT)n |
Simple_repeat |
| scaffold18252 |
27452 |
27523 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold18252 |
27543 |
27618 |
+ |
(AGCTG)n |
Simple_repeat |
| scaffold18252 |
28016 |
28235 |
- |
PL764 |
Unspecified |
| scaffold18252 |
33245 |
33326 |
+ |
(CATGAA)n |
Simple_repeat |
| scaffold18252 |
33776 |
33802 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
35989 |
36149 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
36235 |
36489 |
- |
RS2204 |
Unspecified |
| scaffold18252 |
36591 |
38209 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
38391 |
38637 |
+ |
RS1120 |
Unspecified |
| scaffold18252 |
38870 |
38928 |
+ |
(TTCAA)n |
Simple_repeat |
| scaffold18252 |
40621 |
40653 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
41390 |
41752 |
+ |
RS8 |
Unspecified |
| scaffold18252 |
42235 |
42256 |
+ |
(T)n |
Simple_repeat |
| scaffold18252 |
42424 |
42466 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold18252 |
42483 |
42546 |
+ |
(TGG)n |
Simple_repeat |
| scaffold18252 |
42862 |
42932 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
44762 |
44803 |
+ |
(ATTATA)n |
Simple_repeat |
| scaffold18252 |
44941 |
44976 |
+ |
(AATAT)n |
Simple_repeat |
| scaffold18252 |
45461 |
45686 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18252 |
45728 |
45883 |
+ |
RS313 |
Unspecified |
| scaffold18252 |
45756 |
46224 |
- |
PL948 |
Unspecified |
| scaffold18252 |
46216 |
46615 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
47953 |
47996 |
+ |
(TGCT)n |
Simple_repeat |
| scaffold18252 |
48011 |
48192 |
+ |
RS14329 |
Unspecified |
| scaffold18252 |
48198 |
49287 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
49673 |
49714 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
49875 |
50057 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18252 |
50323 |
50483 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
50569 |
50822 |
- |
RS2204 |
Unspecified |
| scaffold18252 |
50924 |
52287 |
+ |
Copia-37_GM-I |
LTR/Copia |
| scaffold18252 |
52707 |
52743 |
+ |
GA-rich |
Low_complexity |
| scaffold18252 |
52958 |
53019 |
+ |
(AAG)n |
Simple_repeat |
| scaffold18252 |
53342 |
53389 |
+ |
(GAA)n |
Simple_repeat |
| scaffold18252 |
53495 |
53582 |
+ |
RS361 |
Unspecified |
| scaffold18252 |
53634 |
53704 |
+ |
(AT)n |
Simple_repeat |
| scaffold18252 |
53634 |
53792 |
+ |
(AT)n |
Simple_repeat |
| scaffold18252 |
53678 |
53792 |
- |
RS212 |
Unspecified |
| scaffold18252 |
53793 |
53947 |
+ |
RS7727 |
Unspecified |
| scaffold18252 |
54129 |
54174 |
+ |
(AATTGA)n |
Simple_repeat |
| scaffold18252 |
54346 |
54379 |
+ |
(TTTATA)n |
Simple_repeat |
| scaffold18252 |
54936 |
54957 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
56203 |
56250 |
+ |
(TATAAT)n |
Simple_repeat |
| scaffold18252 |
56456 |
56536 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
57644 |
57668 |
+ |
(TTAA)n |
Simple_repeat |
| scaffold18252 |
57801 |
58023 |
- |
RS4 |
Unspecified |
| scaffold18252 |
58199 |
58359 |
+ |
RS12435 |
Unspecified |
| scaffold18252 |
58364 |
58421 |
+ |
(TCT)n |
Simple_repeat |
| scaffold18252 |
58840 |
58862 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
58938 |
59053 |
- |
RS14614 |
Unspecified |
| scaffold18252 |
58954 |
59192 |
+ |
RS961 |
Unspecified |
| scaffold18252 |
59974 |
60039 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
61107 |
61208 |
- |
RS4475 |
Unspecified |
| scaffold18252 |
62797 |
62820 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
65316 |
65339 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
68034 |
68111 |
- |
EnSpm-N1_TD |
DNA/CMC-EnSpm |
| scaffold18252 |
69304 |
69331 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold18252 |
69448 |
69573 |
+ |
PL617 |
Unspecified |
| scaffold18252 |
70107 |
70137 |
+ |
RS1461 |
Unspecified |
| scaffold18252 |
72817 |
73102 |
- |
RS9422 |
Unspecified |
| scaffold18252 |
73563 |
73605 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
74661 |
74714 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
74862 |
74883 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
75013 |
75032 |
+ |
(TAAA)n |
Simple_repeat |
| scaffold18252 |
76070 |
76415 |
- |
PL255 |
Unspecified |
| scaffold18252 |
78660 |
78936 |
+ |
RS12632 |
Unspecified |
| scaffold18252 |
78959 |
79261 |
- |
RS279 |
Unspecified |
| scaffold18252 |
79229 |
79385 |
+ |
RS4864 |
Unspecified |
| scaffold18252 |
80229 |
80248 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold18252 |
81436 |
81587 |
- |
PL619 |
Unspecified |
| scaffold18252 |
81588 |
81749 |
- |
RS48 |
Unspecified |
| scaffold18252 |
86082 |
86267 |
- |
RS6290 |
Unspecified |
| scaffold18252 |
86107 |
86543 |
+ |
PL297 |
Unspecified |
| scaffold18252 |
86535 |
87019 |
- |
RS48 |
Unspecified |
| scaffold18252 |
88237 |
88408 |
- |
RS314 |
Unspecified |
| scaffold18252 |
90320 |
90371 |
+ |
(TAT)n |
Simple_repeat |
| scaffold18252 |
90479 |
90498 |
+ |
(TTC)n |
Simple_repeat |
| scaffold18252 |
91155 |
91177 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18252 |
91178 |
91233 |
+ |
(AATT)n |
Simple_repeat |
| scaffold18252 |
91234 |
91260 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18252 |
91309 |
91436 |
+ |
RS13717 |
Unspecified |
| scaffold18252 |
91775 |
91817 |
+ |
GA-rich |
Low_complexity |
| scaffold18252 |
91972 |
92035 |
+ |
(TTA)n |
Simple_repeat |
| scaffold18252 |
92058 |
92101 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
92206 |
92547 |
+ |
RS539 |
Unspecified |
| scaffold18252 |
92769 |
92888 |
+ |
RS2318 |
Unspecified |
| scaffold18252 |
92774 |
92937 |
+ |
RS4042 |
Unspecified |
| scaffold18252 |
93347 |
93365 |
+ |
(TGC)n |
Simple_repeat |
| scaffold18252 |
94959 |
94987 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
95084 |
95369 |
- |
RS9422 |
Unspecified |
| scaffold18252 |
95820 |
95909 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
96017 |
96059 |
+ |
(ATTAG)n |
Simple_repeat |
| scaffold18252 |
96298 |
96390 |
+ |
PL679 |
Unspecified |
| scaffold18252 |
96298 |
96404 |
- |
RS58 |
Unspecified |
| scaffold18252 |
96415 |
96472 |
+ |
(TTATTAT)n |
Simple_repeat |
| scaffold18252 |
96793 |
96825 |
+ |
(T)n |
Simple_repeat |
| scaffold18252 |
96889 |
96964 |
+ |
A-rich |
Low_complexity |
| scaffold18252 |
96995 |
97018 |
+ |
(A)n |
Simple_repeat |
| scaffold18252 |
97472 |
97763 |
+ |
PL308 |
Unspecified |
| scaffold18252 |
97850 |
97904 |
+ |
(AAGAATT)n |
Simple_repeat |
| scaffold18252 |
98530 |
98656 |
- |
PL70 |
Unspecified |
| scaffold18252 |
101589 |
101837 |
- |
PL567 |
Unspecified |
| scaffold18252 |
101828 |
101940 |
- |
RS537 |
Unspecified |