scaffold1835 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1835 |
1 |
992 |
- |
RS21 |
Unspecified |
| scaffold1835 |
5792 |
5850 |
+ |
(TTGAATA)n |
Simple_repeat |
| scaffold1835 |
6888 |
6944 |
+ |
(AATT)n |
Simple_repeat |
| scaffold1835 |
7401 |
7434 |
+ |
(ATAATA)n |
Simple_repeat |
| scaffold1835 |
7467 |
8194 |
- |
PL166 |
Unspecified |
| scaffold1835 |
8606 |
8646 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
8673 |
9070 |
+ |
PL686 |
Unspecified |
| scaffold1835 |
9574 |
9668 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1835 |
9784 |
9830 |
+ |
(AACTA)n |
Simple_repeat |
| scaffold1835 |
9930 |
9970 |
+ |
(GCCG)n |
Simple_repeat |
| scaffold1835 |
10519 |
11911 |
+ |
Gypsy22-ZM_I-int |
LTR/Gypsy |
| scaffold1835 |
11902 |
13448 |
- |
RS211 |
Unspecified |
| scaffold1835 |
13441 |
13522 |
+ |
(TGT)n |
Simple_repeat |
| scaffold1835 |
13922 |
13956 |
+ |
(TTTTCAT)n |
Simple_repeat |
| scaffold1835 |
14119 |
15089 |
+ |
PL129 |
Unspecified |
| scaffold1835 |
15591 |
15634 |
+ |
G-rich |
Low_complexity |
| scaffold1835 |
16208 |
16253 |
+ |
(GTTTTGT)n |
Simple_repeat |
| scaffold1835 |
16386 |
16435 |
+ |
(TGTGTTT)n |
Simple_repeat |
| scaffold1835 |
16455 |
16607 |
+ |
PL530 |
Unspecified |
| scaffold1835 |
20032 |
20981 |
+ |
PL530 |
Unspecified |
| scaffold1835 |
22374 |
22408 |
+ |
(TTTTC)n |
Simple_repeat |
| scaffold1835 |
23219 |
23262 |
+ |
G-rich |
Low_complexity |
| scaffold1835 |
23349 |
23398 |
+ |
RS4087 |
Unspecified |
| scaffold1835 |
23409 |
23455 |
+ |
(GAGGG)n |
Simple_repeat |
| scaffold1835 |
23609 |
23646 |
+ |
(TCCTT)n |
Simple_repeat |
| scaffold1835 |
23817 |
23872 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
24052 |
24146 |
- |
RS1324 |
Unspecified |
| scaffold1835 |
24156 |
25214 |
+ |
RS1097 |
Unspecified |
| scaffold1835 |
25415 |
25458 |
+ |
(TTTTAAC)n |
Simple_repeat |
| scaffold1835 |
25486 |
25919 |
+ |
PL494 |
Unspecified |
| scaffold1835 |
26142 |
26183 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
26200 |
26681 |
- |
PL350 |
Unspecified |
| scaffold1835 |
26728 |
27154 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
26728 |
26802 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
26787 |
27154 |
- |
PL39 |
Unspecified |
| scaffold1835 |
28954 |
28987 |
+ |
(ATACA)n |
Simple_repeat |
| scaffold1835 |
29168 |
29205 |
+ |
(GATAAT)n |
Simple_repeat |
| scaffold1835 |
29633 |
29666 |
+ |
(A)n |
Simple_repeat |
| scaffold1835 |
31125 |
31188 |
+ |
(CAACT)n |
Simple_repeat |
| scaffold1835 |
31446 |
31505 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1835 |
31505 |
31772 |
+ |
RS1048 |
Unspecified |
| scaffold1835 |
31828 |
31865 |
+ |
(TTCTTC)n |
Simple_repeat |
| scaffold1835 |
33256 |
33338 |
+ |
(GATGAA)n |
Simple_repeat |
| scaffold1835 |
33612 |
33735 |
+ |
EnSpm1_SB |
DNA/CMC-EnSpm |
| scaffold1835 |
34899 |
34976 |
+ |
(ATAATT)n |
Simple_repeat |
| scaffold1835 |
34977 |
35118 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1835 |
35617 |
36266 |
+ |
RS984 |
Unspecified |
| scaffold1835 |
37219 |
37665 |
- |
RS265 |
Unspecified |
| scaffold1835 |
38027 |
38057 |
+ |
(AAT)n |
Simple_repeat |
| scaffold1835 |
38164 |
38604 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold1835 |
38621 |
38677 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold1835 |
38687 |
38746 |
- |
Copia-36_BD-I |
LTR/Copia |
| scaffold1835 |
38821 |
38862 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
39518 |
39861 |
- |
RS1995 |
Unspecified |
| scaffold1835 |
39620 |
39956 |
+ |
RS971 |
Unspecified |
| scaffold1835 |
40282 |
40317 |
+ |
(T)n |
Simple_repeat |
| scaffold1835 |
40458 |
40686 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold1835 |
41014 |
41156 |
- |
RS126 |
Unspecified |
| scaffold1835 |
41638 |
41702 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold1835 |
41894 |
41942 |
+ |
(GAAGAAT)n |
Simple_repeat |
| scaffold1835 |
42209 |
42250 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1835 |
42251 |
42269 |
+ |
(TTATTGA)n |
Simple_repeat |
| scaffold1835 |
42933 |
42964 |
+ |
Gypsy-16_Mad-I |
LTR/Gypsy |
| scaffold1835 |
44765 |
44816 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
45521 |
45569 |
+ |
Gypsy-120_SB-I |
LTR/Gypsy |
| scaffold1835 |
45846 |
45880 |
+ |
(TTTAGT)n |
Simple_repeat |
| scaffold1835 |
46078 |
46119 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1835 |
46120 |
46138 |
+ |
(TTATTGA)n |
Simple_repeat |
| scaffold1835 |
46999 |
47336 |
- |
RS126 |
Unspecified |
| scaffold1835 |
48400 |
48496 |
+ |
(ATTTAT)n |
Simple_repeat |
| scaffold1835 |
48973 |
49023 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold1835 |
49347 |
49379 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
49587 |
49676 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1835 |
49699 |
49730 |
+ |
(ATAAT)n |
Simple_repeat |
| scaffold1835 |
50166 |
50231 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1835 |
50788 |
50843 |
+ |
(TTA)n |
Simple_repeat |
| scaffold1835 |
50881 |
51790 |
+ |
RS716 |
Unspecified |
| scaffold1835 |
51436 |
52155 |
+ |
RS2175 |
Unspecified |
| scaffold1835 |
52739 |
52785 |
+ |
(CATTTT)n |
Simple_repeat |
| scaffold1835 |
53071 |
53282 |
+ |
Copia-85_ST-I |
LTR/Copia |
| scaffold1835 |
53422 |
53458 |
+ |
(TCTCTT)n |
Simple_repeat |
| scaffold1835 |
53493 |
53545 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
55045 |
55717 |
- |
RS695 |
Unspecified |
| scaffold1835 |
55045 |
55641 |
- |
PL814 |
Unspecified |
| scaffold1835 |
55235 |
55803 |
+ |
RS732 |
Unspecified |
| scaffold1835 |
57489 |
57539 |
+ |
(ATTCTA)n |
Simple_repeat |
| scaffold1835 |
57506 |
57949 |
- |
PL778 |
Unspecified |
| scaffold1835 |
57749 |
57799 |
+ |
(ATTCTA)n |
Simple_repeat |
| scaffold1835 |
58008 |
58058 |
+ |
(ATTCTA)n |
Simple_repeat |
| scaffold1835 |
58054 |
58083 |
+ |
(A)n |
Simple_repeat |
| scaffold1835 |
58660 |
58698 |
- |
Athila8A_I-int |
LTR/Gypsy |
| scaffold1835 |
59884 |
59921 |
+ |
(CACACA)n |
Simple_repeat |
| scaffold1835 |
61234 |
61327 |
+ |
(TTGTGTT)n |
Simple_repeat |
| scaffold1835 |
61304 |
61310 |
+ |
(TTTATTT)n |
Simple_repeat |
| scaffold1835 |
61311 |
61402 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold1835 |
62303 |
62381 |
+ |
(TTTTT)n |
Simple_repeat |
| scaffold1835 |
63133 |
63172 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold1835 |
63857 |
63899 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
64290 |
65495 |
+ |
PL933 |
Unspecified |
| scaffold1835 |
66277 |
66332 |
+ |
Gypsy-21_ST-I |
LTR/Gypsy |
| scaffold1835 |
66693 |
66732 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
67135 |
67239 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold1835 |
67365 |
69657 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1835 |
67365 |
69150 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold1835 |
67738 |
69657 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1835 |
67780 |
69150 |
+ |
Gypsy-53_GM-I |
LTR/Gypsy |
| scaffold1835 |
69205 |
69463 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold1835 |
69830 |
70856 |
+ |
Gypsy-I_MT |
LTR/Gypsy |
| scaffold1835 |
70997 |
71469 |
+ |
RS83 |
Unspecified |
| scaffold1835 |
71794 |
71855 |
+ |
(ATACATA)n |
Simple_repeat |
| scaffold1835 |
72416 |
72807 |
- |
RS7333 |
Unspecified |
| scaffold1835 |
73320 |
73386 |
- |
RS8442 |
Unspecified |
| scaffold1835 |
73338 |
73381 |
- |
RS7400 |
Unspecified |
| scaffold1835 |
73364 |
73675 |
- |
RS519 |
Unspecified |
| scaffold1835 |
73667 |
74156 |
- |
RS519 |
Unspecified |
| scaffold1835 |
73759 |
74238 |
- |
PL388 |
Unspecified |
| scaffold1835 |
75547 |
75628 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
76759 |
76849 |
+ |
(GCCTCA)n |
Simple_repeat |
| scaffold1835 |
76850 |
76919 |
+ |
(CAG)n |
Simple_repeat |
| scaffold1835 |
76920 |
76947 |
+ |
(GCCTCA)n |
Simple_repeat |
| scaffold1835 |
77442 |
79613 |
+ |
RS108 |
Unspecified |
| scaffold1835 |
81507 |
81549 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
82658 |
82700 |
+ |
A-rich |
Low_complexity |
| scaffold1835 |
84061 |
84687 |
+ |
RS1819 |
Unspecified |
| scaffold1835 |
84674 |
85197 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold1835 |
85561 |
85928 |
+ |
PL530 |
Unspecified |
| scaffold1835 |
86830 |
86885 |
- |
RETROSAT5_I-int |
LTR/Gypsy |
| scaffold1835 |
87180 |
87256 |
+ |
(AATTAA)n |
Simple_repeat |