scaffold1870 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold1870 |
1 |
121 |
- |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold1870 |
1140 |
1229 |
- |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold1870 |
1382 |
1419 |
- |
Gypsy21-PTR_I-int |
LTR/Gypsy |
| scaffold1870 |
5226 |
6703 |
+ |
RS118 |
Unspecified |
| scaffold1870 |
6917 |
7125 |
+ |
RS7740 |
Unspecified |
| scaffold1870 |
7426 |
7459 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
7566 |
7617 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
7665 |
7716 |
+ |
(T)n |
Simple_repeat |
| scaffold1870 |
9577 |
9996 |
+ |
(TACTAC)n |
Simple_repeat |
| scaffold1870 |
10849 |
11114 |
- |
RS736 |
Unspecified |
| scaffold1870 |
12038 |
12127 |
+ |
(TACAATA)n |
Simple_repeat |
| scaffold1870 |
12236 |
12271 |
+ |
(TTACATT)n |
Simple_repeat |
| scaffold1870 |
12279 |
12323 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
12837 |
12882 |
+ |
PL223 |
Unspecified |
| scaffold1870 |
12972 |
12999 |
+ |
(A)n |
Simple_repeat |
| scaffold1870 |
13690 |
13711 |
+ |
(A)n |
Simple_repeat |
| scaffold1870 |
14021 |
14026 |
+ |
(TTGTT)n |
Simple_repeat |
| scaffold1870 |
14027 |
14057 |
+ |
(T)n |
Simple_repeat |
| scaffold1870 |
19056 |
19244 |
- |
RS934 |
Unspecified |
| scaffold1870 |
19433 |
19538 |
+ |
(CCT)n |
Simple_repeat |
| scaffold1870 |
19789 |
19840 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
20461 |
20497 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
20579 |
20637 |
+ |
(GTG)n |
Simple_repeat |
| scaffold1870 |
20788 |
20838 |
+ |
(ATTTAAT)n |
Simple_repeat |
| scaffold1870 |
20934 |
20960 |
+ |
(T)n |
Simple_repeat |
| scaffold1870 |
21788 |
22049 |
+ |
RS82 |
Unspecified |
| scaffold1870 |
22051 |
22115 |
+ |
(ATA)n |
Simple_repeat |
| scaffold1870 |
22368 |
22392 |
+ |
(A)n |
Simple_repeat |
| scaffold1870 |
23026 |
23137 |
+ |
hAT-1_STu |
DNA/hAT-Tip100 |
| scaffold1870 |
23257 |
23673 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold1870 |
24079 |
24436 |
- |
RS11660 |
Unspecified |
| scaffold1870 |
25224 |
25260 |
+ |
(CCGG)n |
Simple_repeat |
| scaffold1870 |
26161 |
26695 |
+ |
PL880 |
Unspecified |
| scaffold1870 |
26960 |
27192 |
+ |
RS1700 |
Unspecified |
| scaffold1870 |
27256 |
27646 |
+ |
RS1700 |
Unspecified |
| scaffold1870 |
27316 |
27666 |
+ |
RS137 |
Unspecified |
| scaffold1870 |
28004 |
28185 |
- |
RS12267 |
Unspecified |
| scaffold1870 |
28409 |
28460 |
+ |
(TATTAAC)n |
Simple_repeat |
| scaffold1870 |
28646 |
29035 |
+ |
RS1700 |
Unspecified |
| scaffold1870 |
28705 |
29055 |
+ |
RS137 |
Unspecified |
| scaffold1870 |
29393 |
29574 |
- |
RS12267 |
Unspecified |
| scaffold1870 |
30673 |
30696 |
+ |
(A)n |
Simple_repeat |
| scaffold1870 |
31361 |
31403 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
32305 |
32361 |
+ |
(ATTATT)n |
Simple_repeat |
| scaffold1870 |
33625 |
33737 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold1870 |
34150 |
34219 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold1870 |
34663 |
34720 |
+ |
L1-3_CPa |
LINE/L1 |
| scaffold1870 |
34951 |
36009 |
+ |
L1-1_GM |
LINE/L1 |
| scaffold1870 |
37129 |
37155 |
+ |
(T)n |
Simple_repeat |
| scaffold1870 |
37957 |
38506 |
- |
RS4267 |
Unspecified |
| scaffold1870 |
38506 |
38668 |
+ |
RS10552 |
Unspecified |
| scaffold1870 |
38673 |
39222 |
- |
RS4267 |
Unspecified |
| scaffold1870 |
38986 |
39537 |
- |
RS6948 |
Unspecified |
| scaffold1870 |
39565 |
39618 |
+ |
(ACAA)n |
Simple_repeat |
| scaffold1870 |
39797 |
39836 |
+ |
(AATC)n |
Simple_repeat |
| scaffold1870 |
40096 |
41281 |
- |
RS5065 |
Unspecified |
| scaffold1870 |
41863 |
41916 |
+ |
GA-rich |
Low_complexity |
| scaffold1870 |
42262 |
42317 |
+ |
(ATATTG)n |
Simple_repeat |
| scaffold1870 |
42806 |
42874 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1870 |
42875 |
42910 |
+ |
(TATT)n |
Simple_repeat |
| scaffold1870 |
43078 |
43157 |
+ |
(TAT)n |
Simple_repeat |
| scaffold1870 |
43482 |
43518 |
+ |
(TTATATT)n |
Simple_repeat |
| scaffold1870 |
44748 |
44940 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold1870 |
44991 |
45051 |
+ |
Ogre-SD1_I-int |
LTR/Gypsy |
| scaffold1870 |
45368 |
46279 |
+ |
gypsy |
gypsy(TransposonPSI) |
| scaffold1870 |
45800 |
45818 |
+ |
(GAA)n |
Simple_repeat |
| scaffold1870 |
45930 |
46275 |
+ |
SZ-52_int-int |
LTR/Gypsy |
| scaffold1870 |
47692 |
47762 |
+ |
A-rich |
Low_complexity |
| scaffold1870 |
48179 |
48238 |
- |
MEGY-I_MT |
LTR/Gypsy |
| scaffold1870 |
48481 |
48519 |
+ |
(T)n |
Simple_repeat |
| scaffold1870 |
48722 |
48767 |
+ |
(TTCCAACA)n |
Simple_repeat |
| scaffold1870 |
49413 |
49442 |
+ |
(TAA)n |
Simple_repeat |
| scaffold1870 |
49680 |
49797 |
+ |
SHALINE8_MT |
LINE/L1 |
| scaffold1870 |
50401 |
51009 |
+ |
LINE |
LINE(TransposonPSI) |
| scaffold1870 |
50608 |
50969 |
+ |
LINE1-60_SBi |
LINE/L1 |
| scaffold1870 |
52898 |
53167 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold1870 |
53109 |
53167 |
- |
Copia-10_TC-I |
LTR/Copia |
| scaffold1870 |
53168 |
53210 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold1870 |
53455 |
53490 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold1870 |
53690 |
53776 |
- |
Gypsy-10_Mad-I |
LTR/Gypsy |
| scaffold1870 |
54222 |
54769 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold1870 |
57030 |
57322 |
+ |
RS4278 |
Unspecified |
| scaffold1870 |
57030 |
57373 |
- |
RS530 |
Unspecified |
| scaffold1870 |
57207 |
57248 |
+ |
(GGCC)n |
Simple_repeat |
| scaffold1870 |
57349 |
57603 |
- |
RS535 |
Unspecified |
| scaffold1870 |
57567 |
57654 |
- |
RS535 |
Unspecified |
| scaffold1870 |
57671 |
57764 |
- |
GYPSHAN_I_MT-int |
LTR/Gypsy |
| scaffold1870 |
58027 |
58755 |
- |
RS695 |
Unspecified |