scaffold18782 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18782 |
22 |
97 |
- |
Gypsy-27_VV-I |
LTR/Gypsy |
| scaffold18782 |
387 |
651 |
- |
RS10321 |
Unspecified |
| scaffold18782 |
2405 |
3324 |
+ |
RS254 |
Unspecified |
| scaffold18782 |
3642 |
3709 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
4060 |
4093 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold18782 |
4137 |
4219 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold18782 |
4526 |
4652 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18782 |
5373 |
5417 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
7164 |
7200 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
7485 |
7557 |
- |
STOWAWAY14_SB |
DNA/TcMar-Stowaway |
| scaffold18782 |
9569 |
9668 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
9649 |
9668 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
9669 |
9703 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
9704 |
9713 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
9769 |
9808 |
+ |
(TACATT)n |
Simple_repeat |
| scaffold18782 |
10050 |
10103 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
10219 |
10516 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold18782 |
10537 |
10698 |
+ |
L1-5_STu |
LINE/L1 |
| scaffold18782 |
11052 |
11210 |
+ |
EnSpm-1_STu |
DNA/CMC-EnSpm |
| scaffold18782 |
12600 |
12632 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
12998 |
13044 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
13771 |
13789 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
14162 |
14207 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
14369 |
14400 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
15201 |
15446 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
15416 |
15446 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
15553 |
15630 |
+ |
(TTAGTAT)n |
Simple_repeat |
| scaffold18782 |
16872 |
16934 |
+ |
(ATTT)n |
Simple_repeat |
| scaffold18782 |
19198 |
19530 |
- |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold18782 |
19199 |
19428 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold18782 |
19926 |
20612 |
- |
Copia-71_VV-I |
LTR/Copia |
| scaffold18782 |
24513 |
25561 |
- |
RS427 |
Unspecified |
| scaffold18782 |
25485 |
25594 |
- |
RS3852 |
Unspecified |
| scaffold18782 |
29778 |
30502 |
+ |
Copia-22_BRa-I |
LTR/Copia |
| scaffold18782 |
30613 |
30849 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold18782 |
30850 |
30874 |
+ |
(ACTCCG)n |
Simple_repeat |
| scaffold18782 |
30875 |
31242 |
+ |
Copia-71_VV-I |
LTR/Copia |
| scaffold18782 |
31294 |
31504 |
- |
RS2008 |
Unspecified |
| scaffold18782 |
31681 |
31842 |
+ |
GA-rich |
Low_complexity |
| scaffold18782 |
32542 |
32599 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold18782 |
32542 |
32879 |
+ |
(ATTTC)n |
Simple_repeat |
| scaffold18782 |
32573 |
32879 |
- |
RS5106 |
Unspecified |
| scaffold18782 |
32666 |
33282 |
+ |
RS320 |
Unspecified |
| scaffold18782 |
33311 |
33581 |
- |
RS469 |
Unspecified |
| scaffold18782 |
33350 |
33610 |
- |
RS3106 |
Unspecified |
| scaffold18782 |
33676 |
33938 |
- |
RS1301 |
Unspecified |
| scaffold18782 |
34134 |
34262 |
+ |
L1-10_GM |
LINE/L1 |
| scaffold18782 |
34402 |
35800 |
+ |
L1-1_PTr |
LINE/L1 |
| scaffold18782 |
36694 |
36866 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold18782 |
36950 |
38427 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold18782 |
38574 |
39337 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold18782 |
39434 |
39583 |
+ |
Copia-61_GM-I |
LTR/Copia |
| scaffold18782 |
39584 |
39600 |
+ |
(TC)n |
Simple_repeat |
| scaffold18782 |
39623 |
40021 |
+ |
PL17 |
Unspecified |
| scaffold18782 |
40414 |
40552 |
+ |
PL476 |
Unspecified |
| scaffold18782 |
40554 |
40580 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
40687 |
40702 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
40703 |
40760 |
+ |
(TAATATAA)n |
Simple_repeat |
| scaffold18782 |
40963 |
41025 |
+ |
(ATAATTT)n |
Simple_repeat |
| scaffold18782 |
42662 |
42701 |
+ |
(ATAAGTT)n |
Simple_repeat |
| scaffold18782 |
44234 |
44287 |
- |
L1-8_STu |
LINE/L1 |
| scaffold18782 |
44305 |
44739 |
- |
L1-1_GM |
LINE/L1 |
| scaffold18782 |
46123 |
46184 |
+ |
RS4585 |
Unspecified |
| scaffold18782 |
46279 |
46803 |
+ |
RS3437 |
Unspecified |
| scaffold18782 |
46291 |
46893 |
+ |
RS4585 |
Unspecified |
| scaffold18782 |
46911 |
46947 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold18782 |
47046 |
47201 |
- |
RS1261 |
Unspecified |
| scaffold18782 |
48125 |
48221 |
+ |
RS322 |
Unspecified |
| scaffold18782 |
48619 |
48864 |
- |
PL806 |
Unspecified |
| scaffold18782 |
48868 |
48955 |
+ |
RS160 |
Unspecified |
| scaffold18782 |
49213 |
49519 |
+ |
RS160 |
Unspecified |
| scaffold18782 |
49629 |
49652 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold18782 |
50053 |
50237 |
+ |
(CCCGA)n |
Simple_repeat |
| scaffold18782 |
50249 |
50393 |
+ |
PL501 |
Unspecified |
| scaffold18782 |
50478 |
50495 |
+ |
(CA)n |
Simple_repeat |
| scaffold18782 |
50495 |
50541 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
50598 |
51179 |
+ |
RS507 |
Unspecified |
| scaffold18782 |
51436 |
51707 |
- |
RS1 |
Unspecified |
| scaffold18782 |
53597 |
53624 |
+ |
(CAACCA)n |
Simple_repeat |
| scaffold18782 |
54426 |
54457 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
55163 |
55401 |
+ |
RS5215 |
Unspecified |
| scaffold18782 |
55441 |
55627 |
+ |
RS3698 |
Unspecified |
| scaffold18782 |
55675 |
55871 |
- |
RS1048 |
Unspecified |
| scaffold18782 |
56155 |
56403 |
+ |
RS625 |
Unspecified |
| scaffold18782 |
56294 |
56519 |
+ |
RS4314 |
Unspecified |
| scaffold18782 |
56629 |
56653 |
+ |
(ATC)n |
Simple_repeat |
| scaffold18782 |
56659 |
56680 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
57257 |
57398 |
+ |
Copia-78_ST-I |
LTR/Copia |
| scaffold18782 |
62127 |
62151 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
62156 |
62174 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
64097 |
64137 |
+ |
(TGG)n |
Simple_repeat |
| scaffold18782 |
64280 |
64318 |
+ |
(A)n |
Simple_repeat |
| scaffold18782 |
65095 |
65142 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
66635 |
67741 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold18782 |
66936 |
67698 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold18782 |
67925 |
68018 |
- |
L1-1_STu |
LINE/L1 |
| scaffold18782 |
69304 |
69610 |
- |
RS13839 |
Unspecified |
| scaffold18782 |
69651 |
69680 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
69681 |
70163 |
- |
PL748 |
Unspecified |
| scaffold18782 |
73538 |
73663 |
- |
RS1268 |
Unspecified |
| scaffold18782 |
73650 |
73734 |
- |
RS1268 |
Unspecified |
| scaffold18782 |
73733 |
74067 |
- |
RS1094 |
Unspecified |
| scaffold18782 |
73943 |
74321 |
- |
RS1094 |
Unspecified |
| scaffold18782 |
74197 |
74575 |
- |
RS1094 |
Unspecified |
| scaffold18782 |
74451 |
74595 |
- |
RS1094 |
Unspecified |
| scaffold18782 |
74885 |
74911 |
- |
Copia-90_Mad-I |
LTR/Copia |
| scaffold18782 |
74912 |
74980 |
- |
ATGP5A_I-int |
LTR/Gypsy |
| scaffold18782 |
75077 |
75191 |
- |
Gypsy27-ZM_I-int |
LTR/Gypsy |
| scaffold18782 |
75231 |
76117 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold18782 |
76310 |
76705 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold18782 |
76437 |
76680 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold18782 |
76722 |
77019 |
- |
Gypsy-38_Mad-I |
LTR/Gypsy |
| scaffold18782 |
77319 |
78425 |
- |
LINE |
LINE(TransposonPSI) |
| scaffold18782 |
77620 |
78382 |
- |
LINE1I_MT |
LINE/L1 |
| scaffold18782 |
78609 |
78702 |
- |
L1-1_STu |
LINE/L1 |
| scaffold18782 |
79988 |
80294 |
- |
RS13839 |
Unspecified |
| scaffold18782 |
80335 |
80364 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
80365 |
80847 |
- |
PL748 |
Unspecified |
| scaffold18782 |
80874 |
80967 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
81071 |
81094 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
81560 |
81746 |
- |
RS325 |
Unspecified |
| scaffold18782 |
81740 |
81842 |
+ |
RS750 |
Unspecified |
| scaffold18782 |
82197 |
82370 |
+ |
RS3687 |
Unspecified |
| scaffold18782 |
82644 |
82711 |
+ |
(TATA)n |
Simple_repeat |
| scaffold18782 |
82767 |
82858 |
+ |
(AATATT)n |
Simple_repeat |
| scaffold18782 |
83079 |
83120 |
+ |
A-rich |
Low_complexity |
| scaffold18782 |
84654 |
85347 |
+ |
PL850 |
Unspecified |
| scaffold18782 |
85345 |
85537 |
+ |
PL171 |
Unspecified |
| scaffold18782 |
85537 |
85615 |
- |
RS1865 |
Unspecified |
| scaffold18782 |
85698 |
85747 |
+ |
(ATTTAA)n |
Simple_repeat |
| scaffold18782 |
85922 |
85979 |
+ |
(ATTAA)n |
Simple_repeat |
| scaffold18782 |
86504 |
86586 |
+ |
(CTT)n |
Simple_repeat |
| scaffold18782 |
86595 |
86733 |
+ |
(CAA)n |
Simple_repeat |
| scaffold18782 |
86890 |
86962 |
+ |
(CAC)n |
Simple_repeat |
| scaffold18782 |
87139 |
87177 |
+ |
(TTTCGA)n |
Simple_repeat |
| scaffold18782 |
89409 |
89447 |
+ |
(AATGAAT)n |
Simple_repeat |
| scaffold18782 |
91164 |
91190 |
+ |
(TGGAA)n |
Simple_repeat |
| scaffold18782 |
91319 |
91376 |
+ |
(TTT)n |
Simple_repeat |
| scaffold18782 |
91538 |
91657 |
+ |
(AAT)n |
Simple_repeat |
| scaffold18782 |
92608 |
92633 |
+ |
(T)n |
Simple_repeat |
| scaffold18782 |
93584 |
94383 |
- |
RS265 |
Unspecified |
| scaffold18782 |
94464 |
94517 |
+ |
(TATT)n |
Simple_repeat |