scaffold18858 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold18858 |
157 |
182 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
270 |
421 |
- |
RS17679 |
Unspecified |
| scaffold18858 |
587 |
618 |
+ |
(AAAATAA)n |
Simple_repeat |
| scaffold18858 |
853 |
1449 |
- |
RS14066 |
Unspecified |
| scaffold18858 |
1497 |
2093 |
- |
RS14066 |
Unspecified |
| scaffold18858 |
1854 |
3138 |
+ |
Copia25-PTR_I-int |
LTR/Copia |
| scaffold18858 |
2729 |
2836 |
- |
RS13567 |
Unspecified |
| scaffold18858 |
3397 |
3548 |
- |
RS16180 |
Unspecified |
| scaffold18858 |
3575 |
3680 |
- |
RS17454 |
Unspecified |
| scaffold18858 |
5131 |
5256 |
- |
RS18415 |
Unspecified |
| scaffold18858 |
8164 |
8314 |
- |
RS16616 |
Unspecified |
| scaffold18858 |
8347 |
8505 |
- |
RS17001 |
Unspecified |
| scaffold18858 |
11394 |
11416 |
+ |
(AGAA)n |
Simple_repeat |
| scaffold18858 |
11994 |
12624 |
+ |
RS1141 |
Unspecified |
| scaffold18858 |
12501 |
12639 |
- |
RS2735 |
Unspecified |
| scaffold18858 |
12727 |
12788 |
+ |
A-rich |
Low_complexity |
| scaffold18858 |
12789 |
12812 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
12813 |
12831 |
+ |
A-rich |
Low_complexity |
| scaffold18858 |
15260 |
15300 |
+ |
(AATTTAG)n |
Simple_repeat |
| scaffold18858 |
17774 |
17811 |
+ |
(TTTT)n |
Simple_repeat |
| scaffold18858 |
17906 |
17942 |
- |
RS3612 |
Unspecified |
| scaffold18858 |
18094 |
18309 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18858 |
18094 |
18165 |
+ |
(TAA)n |
Simple_repeat |
| scaffold18858 |
18130 |
18309 |
- |
RS1913 |
Unspecified |
| scaffold18858 |
18952 |
19139 |
+ |
RS152 |
Unspecified |
| scaffold18858 |
19141 |
19365 |
- |
RS14541 |
Unspecified |
| scaffold18858 |
19143 |
19323 |
- |
RS503 |
Unspecified |
| scaffold18858 |
19440 |
19535 |
- |
RS13485 |
Unspecified |
| scaffold18858 |
19446 |
19549 |
+ |
RS4299 |
Unspecified |
| scaffold18858 |
19457 |
19549 |
- |
RS3868 |
Unspecified |
| scaffold18858 |
19665 |
19957 |
+ |
RS155 |
Unspecified |
| scaffold18858 |
19981 |
20175 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold18858 |
20103 |
20175 |
+ |
(TTTTA)n |
Simple_repeat |
| scaffold18858 |
20527 |
20585 |
- |
PL171 |
Unspecified |
| scaffold18858 |
20534 |
20858 |
- |
PL470 |
Unspecified |
| scaffold18858 |
22036 |
22150 |
- |
PL470 |
Unspecified |
| scaffold18858 |
22146 |
22284 |
+ |
PL750 |
Unspecified |
| scaffold18858 |
22364 |
22505 |
- |
PL352 |
Unspecified |
| scaffold18858 |
23236 |
23307 |
+ |
(CCA)n |
Simple_repeat |
| scaffold18858 |
23402 |
23545 |
- |
PL501 |
Unspecified |
| scaffold18858 |
23550 |
23588 |
+ |
(TTTGTA)n |
Simple_repeat |
| scaffold18858 |
25119 |
25160 |
- |
RS172 |
Unspecified |
| scaffold18858 |
25166 |
26302 |
- |
RS306 |
Unspecified |
| scaffold18858 |
27821 |
27891 |
+ |
RS11557 |
Unspecified |
| scaffold18858 |
27832 |
27960 |
- |
RS4042 |
Unspecified |
| scaffold18858 |
28550 |
29288 |
+ |
Copia-71_ST-I |
LTR/Copia |
| scaffold18858 |
29641 |
30456 |
+ |
Copia-71_ST-I |
LTR/Copia |
| scaffold18858 |
30487 |
30543 |
- |
RS923 |
Unspecified |
| scaffold18858 |
30766 |
30800 |
+ |
A-rich |
Low_complexity |
| scaffold18858 |
30959 |
31121 |
- |
RS4 |
Unspecified |
| scaffold18858 |
31328 |
31479 |
+ |
PL572 |
Unspecified |
| scaffold18858 |
31590 |
31627 |
+ |
(GAAT)n |
Simple_repeat |
| scaffold18858 |
32711 |
32730 |
+ |
(T)n |
Simple_repeat |
| scaffold18858 |
32784 |
32973 |
+ |
RS4222 |
Unspecified |
| scaffold18858 |
34181 |
34215 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
34287 |
34323 |
+ |
(AATA)n |
Simple_repeat |
| scaffold18858 |
34978 |
35031 |
- |
RS18371 |
Unspecified |
| scaffold18858 |
35287 |
35684 |
- |
RS29 |
Unspecified |
| scaffold18858 |
35985 |
36048 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold18858 |
36209 |
36344 |
+ |
RS5880 |
Unspecified |
| scaffold18858 |
36403 |
36463 |
+ |
HAT-14_Mad |
DNA/hAT-Tip100 |
| scaffold18858 |
36734 |
36930 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold18858 |
36958 |
37071 |
- |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold18858 |
36978 |
37163 |
+ |
ENSPM-6_ZM |
DNA/CMC-EnSpm |
| scaffold18858 |
37313 |
37878 |
- |
PL53 |
Unspecified |
| scaffold18858 |
38250 |
38331 |
+ |
RS16382 |
Unspecified |
| scaffold18858 |
38266 |
38331 |
+ |
PL436 |
Unspecified |
| scaffold18858 |
39204 |
39234 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold18858 |
39560 |
39609 |
+ |
(GAGGATG)n |
Simple_repeat |
| scaffold18858 |
39645 |
39670 |
+ |
(AG)n |
Simple_repeat |
| scaffold18858 |
40534 |
40706 |
- |
RS12736 |
Unspecified |
| scaffold18858 |
41645 |
41801 |
+ |
PL429 |
Unspecified |
| scaffold18858 |
42323 |
42344 |
+ |
(CGCA)n |
Simple_repeat |
| scaffold18858 |
42641 |
42848 |
- |
RS1045 |
Unspecified |
| scaffold18858 |
43253 |
43529 |
+ |
RS586 |
Unspecified |
| scaffold18858 |
43774 |
43839 |
+ |
(ATGGAT)n |
Simple_repeat |
| scaffold18858 |
43995 |
44018 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
44448 |
44471 |
+ |
(TATC)n |
Simple_repeat |
| scaffold18858 |
44768 |
44803 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
45162 |
45211 |
- |
Copia10-VV_LTR |
LTR/Copia |
| scaffold18858 |
47755 |
47847 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold18858 |
48527 |
48591 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold18858 |
48648 |
49127 |
+ |
PL350 |
Unspecified |
| scaffold18858 |
49143 |
49644 |
+ |
PL919 |
Unspecified |
| scaffold18858 |
50932 |
51288 |
+ |
RS42 |
Unspecified |
| scaffold18858 |
51653 |
51803 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold18858 |
52989 |
54447 |
- |
Copia-3_SL-I |
LTR/Copia |
| scaffold18858 |
54547 |
54590 |
+ |
A-rich |
Low_complexity |
| scaffold18858 |
54756 |
54898 |
- |
Copia-85_ST-I |
LTR/Copia |
| scaffold18858 |
55195 |
55343 |
- |
COP2_I_MT-int |
LTR/Copia |
| scaffold18858 |
56408 |
56551 |
+ |
RS14708 |
Unspecified |
| scaffold18858 |
56763 |
56872 |
- |
RS11967 |
Unspecified |
| scaffold18858 |
57233 |
57258 |
+ |
(TAG)n |
Simple_repeat |
| scaffold18858 |
57428 |
57667 |
- |
RS586 |
Unspecified |
| scaffold18858 |
57647 |
57714 |
- |
RS581 |
Unspecified |
| scaffold18858 |
57708 |
57810 |
+ |
RS9899 |
Unspecified |
| scaffold18858 |
57840 |
58035 |
+ |
RS12746 |
Unspecified |
| scaffold18858 |
58824 |
58850 |
+ |
A-rich |
Low_complexity |
| scaffold18858 |
58982 |
59127 |
- |
EnSpm-N1_SB |
DNA/CMC-EnSpm |
| scaffold18858 |
59744 |
59763 |
+ |
(A)n |
Simple_repeat |
| scaffold18858 |
60827 |
60869 |
+ |
G-rich |
Low_complexity |
| scaffold18858 |
61103 |
61216 |
- |
COPI2_LTR |
LTR/Copia |