scaffold19054 Repeat List
| genome |
start |
end |
strand |
repeat-name |
repeat-class |
| scaffold19054 |
197 |
309 |
- |
HARB-4_Mad |
DNA/PIF-Harbinger |
| scaffold19054 |
967 |
985 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
1183 |
1477 |
- |
VHARB-N2_VV |
DNA/PIF-Harbinger |
| scaffold19054 |
1478 |
1712 |
- |
MtPH-A6-3-Ia |
DNA/Harbinger |
| scaffold19054 |
1514 |
1931 |
- |
MtPH-A6-4-Ia |
DNA/PIF-Harbinger |
| scaffold19054 |
1710 |
2079 |
- |
MtPH-A6-3-Ia |
DNA/Harbinger |
| scaffold19054 |
1713 |
1730 |
- |
VHARB-N2_VV |
DNA/PIF-Harbinger |
| scaffold19054 |
2398 |
2420 |
+ |
(AAC)n |
Simple_repeat |
| scaffold19054 |
3927 |
3946 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
3996 |
4065 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
4332 |
4577 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
5616 |
6704 |
+ |
RS13510 |
Unspecified |
| scaffold19054 |
7167 |
7416 |
+ |
RS581 |
Unspecified |
| scaffold19054 |
7844 |
8091 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
8089 |
8157 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
8520 |
8716 |
+ |
RS9797 |
Unspecified |
| scaffold19054 |
8884 |
8909 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
9231 |
9248 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
9774 |
9845 |
+ |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold19054 |
10036 |
10093 |
+ |
RS9797 |
Unspecified |
| scaffold19054 |
10258 |
10318 |
- |
PIGY-I_PS |
LTR/Gypsy |
| scaffold19054 |
10330 |
10363 |
+ |
(TAGAAT)n |
Simple_repeat |
| scaffold19054 |
10507 |
10711 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
11060 |
11313 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
11109 |
11415 |
+ |
Copia7-ZM_I-int |
LTR/Copia |
| scaffold19054 |
12394 |
13483 |
+ |
RS13510 |
Unspecified |
| scaffold19054 |
13666 |
13702 |
+ |
(AAT)n |
Simple_repeat |
| scaffold19054 |
13977 |
14046 |
+ |
(ATA)n |
Simple_repeat |
| scaffold19054 |
14094 |
14142 |
+ |
(ATACACA)n |
Simple_repeat |
| scaffold19054 |
15208 |
15246 |
+ |
(ATTCA)n |
Simple_repeat |
| scaffold19054 |
16834 |
16864 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
16994 |
17101 |
- |
RS210 |
Unspecified |
| scaffold19054 |
17813 |
17856 |
+ |
(AATAAC)n |
Simple_repeat |
| scaffold19054 |
17879 |
17995 |
+ |
RS13374 |
Unspecified |
| scaffold19054 |
18192 |
18401 |
+ |
RS12291 |
Unspecified |
| scaffold19054 |
18463 |
18503 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
18745 |
18806 |
+ |
(AATCAA)n |
Simple_repeat |
| scaffold19054 |
18878 |
18919 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
19338 |
19509 |
- |
RS3519 |
Unspecified |
| scaffold19054 |
19510 |
19542 |
- |
RS3519 |
Unspecified |
| scaffold19054 |
20280 |
20581 |
+ |
RS14565 |
Unspecified |
| scaffold19054 |
20788 |
20812 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
21739 |
21973 |
- |
RS6307 |
Unspecified |
| scaffold19054 |
21967 |
22077 |
+ |
PL842 |
Unspecified |
| scaffold19054 |
22128 |
22193 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
22273 |
22313 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
22849 |
23026 |
+ |
RS12271 |
Unspecified |
| scaffold19054 |
23046 |
23220 |
- |
RS6635 |
Unspecified |
| scaffold19054 |
24120 |
24294 |
+ |
RS12271 |
Unspecified |
| scaffold19054 |
24312 |
24486 |
- |
RS6635 |
Unspecified |
| scaffold19054 |
25516 |
25545 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
28614 |
29050 |
+ |
PL774 |
Unspecified |
| scaffold19054 |
29004 |
29057 |
+ |
RS12750 |
Unspecified |
| scaffold19054 |
29158 |
29278 |
- |
RS6635 |
Unspecified |
| scaffold19054 |
29386 |
29418 |
+ |
(GT)n |
Simple_repeat |
| scaffold19054 |
29885 |
30059 |
+ |
RS12271 |
Unspecified |
| scaffold19054 |
30077 |
30133 |
- |
RS6635 |
Unspecified |
| scaffold19054 |
30280 |
30318 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
30589 |
30607 |
+ |
(TA)n |
Simple_repeat |
| scaffold19054 |
31837 |
31873 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
32165 |
32194 |
+ |
(ACACG)n |
Simple_repeat |
| scaffold19054 |
32736 |
32763 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold19054 |
32919 |
33186 |
- |
RS1042 |
Unspecified |
| scaffold19054 |
33163 |
33253 |
- |
PL561 |
Unspecified |
| scaffold19054 |
33421 |
33498 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold19054 |
33520 |
33778 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
33875 |
33905 |
+ |
(AACCCG)n |
Simple_repeat |
| scaffold19054 |
34036 |
34138 |
+ |
(TAATATT)n |
Simple_repeat |
| scaffold19054 |
35533 |
35560 |
+ |
(GAACT)n |
Simple_repeat |
| scaffold19054 |
35689 |
35707 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
36018 |
36277 |
- |
RS4094 |
Unspecified |
| scaffold19054 |
37199 |
38288 |
+ |
RS13510 |
Unspecified |
| scaffold19054 |
38404 |
38432 |
+ |
(TA)n |
Simple_repeat |
| scaffold19054 |
38507 |
38551 |
+ |
(AAT)n |
Simple_repeat |
| scaffold19054 |
38690 |
38750 |
+ |
PIGY-I_PS |
LTR/Gypsy |
| scaffold19054 |
38955 |
39050 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
39002 |
39059 |
+ |
(ATA)n |
Simple_repeat |
| scaffold19054 |
40361 |
40404 |
+ |
(AGTTC)n |
Simple_repeat |
| scaffold19054 |
43798 |
43817 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
44147 |
44175 |
+ |
(AATGA)n |
Simple_repeat |
| scaffold19054 |
44621 |
44675 |
+ |
(ATTTA)n |
Simple_repeat |
| scaffold19054 |
44678 |
44721 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
44876 |
44991 |
+ |
(TGG)n |
Simple_repeat |
| scaffold19054 |
44995 |
45047 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
45044 |
45157 |
+ |
(TGG)n |
Simple_repeat |
| scaffold19054 |
45194 |
45229 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
46208 |
46604 |
- |
PL90 |
Unspecified |
| scaffold19054 |
46627 |
46656 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
46707 |
46759 |
+ |
(AAATG)n |
Simple_repeat |
| scaffold19054 |
46817 |
46984 |
+ |
RS2527 |
Unspecified |
| scaffold19054 |
46950 |
47144 |
+ |
RS7235 |
Unspecified |
| scaffold19054 |
47152 |
47244 |
+ |
RS2386 |
Unspecified |
| scaffold19054 |
47368 |
47634 |
- |
RS4 |
Unspecified |
| scaffold19054 |
47661 |
47764 |
- |
RS873 |
Unspecified |
| scaffold19054 |
47834 |
47884 |
+ |
GA-rich |
Low_complexity |
| scaffold19054 |
48034 |
48061 |
+ |
(TGG)n |
Simple_repeat |
| scaffold19054 |
49648 |
49664 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
50152 |
50171 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
50331 |
50437 |
+ |
RS4475 |
Unspecified |
| scaffold19054 |
50345 |
50451 |
- |
RS8115 |
Unspecified |
| scaffold19054 |
50465 |
50484 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
50760 |
50942 |
+ |
RS178 |
Unspecified |
| scaffold19054 |
51031 |
51071 |
+ |
(TTAAT)n |
Simple_repeat |
| scaffold19054 |
51072 |
51151 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
51186 |
51260 |
+ |
GA-rich |
Low_complexity |
| scaffold19054 |
51262 |
51291 |
+ |
(TGC)n |
Simple_repeat |
| scaffold19054 |
51530 |
51614 |
+ |
(TTG)n |
Simple_repeat |
| scaffold19054 |
55572 |
55593 |
+ |
(CTTT)n |
Simple_repeat |
| scaffold19054 |
56150 |
56181 |
+ |
(GAATG)n |
Simple_repeat |
| scaffold19054 |
58014 |
58136 |
+ |
Copia-67_VV-I |
LTR/Copia |
| scaffold19054 |
60062 |
60093 |
+ |
(GTAAT)n |
Simple_repeat |
| scaffold19054 |
61860 |
62317 |
+ |
RS7210 |
Unspecified |
| scaffold19054 |
64771 |
64804 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
66128 |
66157 |
+ |
(ATC)n |
Simple_repeat |
| scaffold19054 |
66487 |
66546 |
- |
RS966 |
Unspecified |
| scaffold19054 |
66663 |
66748 |
+ |
RS445 |
Unspecified |
| scaffold19054 |
66997 |
67176 |
+ |
PL438 |
Unspecified |
| scaffold19054 |
67371 |
67652 |
- |
RS1793 |
Unspecified |
| scaffold19054 |
68032 |
68416 |
- |
RS1010 |
Unspecified |
| scaffold19054 |
68770 |
68833 |
- |
hAT-4_GM |
DNA/hAT-Tip100 |
| scaffold19054 |
70981 |
71007 |
+ |
(ATA)n |
Simple_repeat |
| scaffold19054 |
71237 |
71271 |
+ |
(AAATA)n |
Simple_repeat |
| scaffold19054 |
71314 |
71354 |
+ |
(TTGAA)n |
Simple_repeat |
| scaffold19054 |
71954 |
72153 |
+ |
RS106 |
Unspecified |
| scaffold19054 |
72146 |
72204 |
- |
PL601 |
Unspecified |
| scaffold19054 |
72461 |
72548 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
72628 |
73145 |
- |
RS11090 |
Unspecified |
| scaffold19054 |
72702 |
73329 |
- |
RS3253 |
Unspecified |
| scaffold19054 |
72863 |
73477 |
+ |
RS2470 |
Unspecified |
| scaffold19054 |
73711 |
73911 |
+ |
TY1_Copia |
TY1_Copia(TransposonPSI) |
| scaffold19054 |
73803 |
73859 |
+ |
Copia-12_EPa-I |
LTR/Copia |
| scaffold19054 |
74249 |
74306 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold19054 |
74558 |
74729 |
- |
RS1658 |
Unspecified |
| scaffold19054 |
74891 |
74947 |
+ |
(TAAT)n |
Simple_repeat |
| scaffold19054 |
75002 |
75042 |
+ |
(TCTTTTC)n |
Simple_repeat |
| scaffold19054 |
75152 |
75458 |
+ |
RS310 |
Unspecified |
| scaffold19054 |
77234 |
77281 |
+ |
GA-rich |
Low_complexity |
| scaffold19054 |
77498 |
77857 |
- |
PL580 |
Unspecified |
| scaffold19054 |
78064 |
78232 |
- |
RS177 |
Unspecified |
| scaffold19054 |
78779 |
78828 |
+ |
(TTCAG)n |
Simple_repeat |
| scaffold19054 |
82390 |
82490 |
+ |
(ACA)n |
Simple_repeat |
| scaffold19054 |
82844 |
82868 |
+ |
(AC)n |
Simple_repeat |
| scaffold19054 |
83208 |
83259 |
+ |
(ATG)n |
Simple_repeat |
| scaffold19054 |
83271 |
83352 |
+ |
(TGAAGA)n |
Simple_repeat |
| scaffold19054 |
83377 |
83624 |
- |
RS185 |
Unspecified |
| scaffold19054 |
83887 |
83934 |
+ |
(ATT)n |
Simple_repeat |
| scaffold19054 |
84102 |
84148 |
+ |
(AT)n |
Simple_repeat |
| scaffold19054 |
84484 |
84507 |
+ |
(TA)n |
Simple_repeat |
| scaffold19054 |
84722 |
84755 |
+ |
(TACTAAT)n |
Simple_repeat |
| scaffold19054 |
84866 |
84905 |
+ |
(TTTA)n |
Simple_repeat |
| scaffold19054 |
85731 |
85766 |
+ |
(ACTTTAA)n |
Simple_repeat |
| scaffold19054 |
85848 |
85896 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
86098 |
86120 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
90565 |
90596 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
90727 |
90750 |
+ |
(ATT)n |
Simple_repeat |
| scaffold19054 |
91277 |
91309 |
+ |
(TTGA)n |
Simple_repeat |
| scaffold19054 |
91920 |
91963 |
+ |
(GTTGG)n |
Simple_repeat |
| scaffold19054 |
92448 |
92499 |
- |
RS311 |
Unspecified |
| scaffold19054 |
92485 |
92699 |
- |
RS311 |
Unspecified |
| scaffold19054 |
95617 |
95638 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
96199 |
96237 |
+ |
(TGG)n |
Simple_repeat |
| scaffold19054 |
97231 |
97302 |
+ |
(ATATTA)n |
Simple_repeat |
| scaffold19054 |
98246 |
98287 |
+ |
(TAT)n |
Simple_repeat |
| scaffold19054 |
98364 |
98386 |
+ |
(AAAT)n |
Simple_repeat |
| scaffold19054 |
98504 |
98537 |
+ |
(TTA)n |
Simple_repeat |
| scaffold19054 |
99725 |
99754 |
+ |
(GTG)n |
Simple_repeat |
| scaffold19054 |
100313 |
100406 |
+ |
RS16382 |
Unspecified |
| scaffold19054 |
101116 |
101181 |
+ |
RS17606 |
Unspecified |
| scaffold19054 |
109088 |
109146 |
+ |
(AAACCCT)n |
Simple_repeat |
| scaffold19054 |
109207 |
109257 |
+ |
Gypsy-37_GM-I |
LTR/Gypsy |
| scaffold19054 |
109354 |
109533 |
+ |
RS9481 |
Unspecified |
| scaffold19054 |
109607 |
109630 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
111943 |
111987 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
112437 |
112476 |
+ |
(TAT)n |
Simple_repeat |
| scaffold19054 |
113869 |
113900 |
+ |
(TCATCG)n |
Simple_repeat |
| scaffold19054 |
114195 |
114217 |
+ |
(TGTT)n |
Simple_repeat |
| scaffold19054 |
115354 |
115533 |
+ |
RS18145 |
Unspecified |
| scaffold19054 |
115856 |
115979 |
+ |
RS15425 |
Unspecified |
| scaffold19054 |
115997 |
116229 |
+ |
RS16956 |
Unspecified |
| scaffold19054 |
116860 |
117260 |
+ |
RS554 |
Unspecified |
| scaffold19054 |
117710 |
117743 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold19054 |
117791 |
117897 |
+ |
RS14951 |
Unspecified |
| scaffold19054 |
118246 |
118348 |
- |
RS4475 |
Unspecified |
| scaffold19054 |
118564 |
118677 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118574 |
118675 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118594 |
118695 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118604 |
118715 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118624 |
118725 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118644 |
118752 |
- |
RS1323 |
Unspecified |
| scaffold19054 |
118752 |
118797 |
+ |
(AAT)n |
Simple_repeat |
| scaffold19054 |
118799 |
118978 |
+ |
RS18145 |
Unspecified |
| scaffold19054 |
119301 |
119424 |
+ |
RS15425 |
Unspecified |
| scaffold19054 |
119442 |
119674 |
+ |
RS16956 |
Unspecified |
| scaffold19054 |
120455 |
120488 |
+ |
(ATAA)n |
Simple_repeat |
| scaffold19054 |
120536 |
120642 |
+ |
RS14951 |
Unspecified |
| scaffold19054 |
121010 |
121129 |
- |
RS10491 |
Unspecified |
| scaffold19054 |
121032 |
121136 |
- |
RS4475 |
Unspecified |
| scaffold19054 |
121392 |
121410 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
122942 |
122989 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
123217 |
123245 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
123246 |
123264 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
123520 |
123553 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
123707 |
123796 |
- |
RS16382 |
Unspecified |
| scaffold19054 |
124429 |
124875 |
+ |
PL2 |
Unspecified |
| scaffold19054 |
124987 |
125069 |
+ |
(TTA)n |
Simple_repeat |
| scaffold19054 |
125647 |
126093 |
+ |
PL2 |
Unspecified |
| scaffold19054 |
126205 |
126301 |
+ |
(TTA)n |
Simple_repeat |
| scaffold19054 |
126565 |
126604 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
129291 |
129520 |
- |
RS581 |
Unspecified |
| scaffold19054 |
129540 |
129579 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold19054 |
129847 |
129897 |
+ |
(TA)n |
Simple_repeat |
| scaffold19054 |
130403 |
130471 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold19054 |
130542 |
130598 |
+ |
(GCACG)n |
Simple_repeat |
| scaffold19054 |
130778 |
130825 |
+ |
(TATAA)n |
Simple_repeat |
| scaffold19054 |
131167 |
131397 |
- |
RS581 |
Unspecified |
| scaffold19054 |
131417 |
131456 |
+ |
(TCATT)n |
Simple_repeat |
| scaffold19054 |
131739 |
131785 |
+ |
(TA)n |
Simple_repeat |
| scaffold19054 |
132282 |
132531 |
+ |
(AACTG)n |
Simple_repeat |
| scaffold19054 |
133458 |
133559 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold19054 |
133902 |
133932 |
+ |
TRC1 |
DNA/PIF-Harbinger |
| scaffold19054 |
135181 |
135281 |
+ |
RS16382 |
Unspecified |
| scaffold19054 |
135274 |
135494 |
+ |
RS356 |
Unspecified |
| scaffold19054 |
135496 |
135544 |
- |
RS10491 |
Unspecified |
| scaffold19054 |
137157 |
137205 |
+ |
(TTA)n |
Simple_repeat |
| scaffold19054 |
137273 |
137302 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
138019 |
138113 |
+ |
RS8095 |
Unspecified |
| scaffold19054 |
138145 |
138410 |
- |
RS356 |
Unspecified |
| scaffold19054 |
138723 |
138813 |
+ |
RS9531 |
Unspecified |
| scaffold19054 |
139169 |
139202 |
+ |
(CGACC)n |
Simple_repeat |
| scaffold19054 |
139246 |
139328 |
- |
HAT-10_Mad |
DNA/hAT-Ac |
| scaffold19054 |
139634 |
139676 |
+ |
(GACCC)n |
Simple_repeat |
| scaffold19054 |
139916 |
140109 |
+ |
LTR-1_SBi-LTR |
LTR |
| scaffold19054 |
140584 |
140653 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
141173 |
141229 |
+ |
(ATTTCAA)n |
Simple_repeat |
| scaffold19054 |
141589 |
141876 |
- |
EnSpm-11_OS |
DNA/CMC-EnSpm |
| scaffold19054 |
141589 |
141628 |
- |
EnSpm-11_OS |
DNA/CMC-EnSpm |
| scaffold19054 |
141614 |
141876 |
+ |
RS240 |
Unspecified |
| scaffold19054 |
141926 |
142098 |
- |
RS133 |
Unspecified |
| scaffold19054 |
142147 |
142234 |
- |
RS4475 |
Unspecified |
| scaffold19054 |
142431 |
142495 |
+ |
(AATTATT)n |
Simple_repeat |
| scaffold19054 |
142598 |
142782 |
+ |
RS178 |
Unspecified |
| scaffold19054 |
143690 |
143914 |
+ |
RS18 |
Unspecified |
| scaffold19054 |
144173 |
144208 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
146181 |
146212 |
+ |
(TATTTA)n |
Simple_repeat |
| scaffold19054 |
146547 |
146577 |
+ |
(CA)n |
Simple_repeat |
| scaffold19054 |
147114 |
147136 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
149517 |
149559 |
+ |
RS1534 |
Unspecified |
| scaffold19054 |
149567 |
149619 |
+ |
Gypsy-20_SB-I |
LTR/Gypsy |
| scaffold19054 |
149848 |
150208 |
- |
RS4950 |
Unspecified |
| scaffold19054 |
149937 |
150216 |
+ |
RS432 |
Unspecified |
| scaffold19054 |
152193 |
152242 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
152920 |
152961 |
+ |
(TGGAAAT)n |
Simple_repeat |
| scaffold19054 |
153137 |
153822 |
+ |
PL698 |
Unspecified |
| scaffold19054 |
153814 |
153897 |
- |
RS1076 |
Unspecified |
| scaffold19054 |
153915 |
153974 |
+ |
(TCCGATA)n |
Simple_repeat |
| scaffold19054 |
154156 |
154399 |
+ |
RS1095 |
Unspecified |
| scaffold19054 |
154715 |
154868 |
- |
RS54 |
Unspecified |
| scaffold19054 |
157477 |
157503 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
158116 |
158175 |
+ |
(GTATGCC)n |
Simple_repeat |
| scaffold19054 |
158371 |
158415 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
159784 |
160083 |
- |
RS574 |
Unspecified |
| scaffold19054 |
160302 |
160336 |
+ |
(TTTAA)n |
Simple_repeat |
| scaffold19054 |
166072 |
166100 |
+ |
(GCA)n |
Simple_repeat |
| scaffold19054 |
166785 |
166956 |
+ |
RS38 |
Unspecified |
| scaffold19054 |
167044 |
167069 |
+ |
(TATTT)n |
Simple_repeat |
| scaffold19054 |
169765 |
170199 |
+ |
PL69 |
Unspecified |
| scaffold19054 |
177774 |
177820 |
+ |
(ATCC)n |
Simple_repeat |
| scaffold19054 |
177898 |
177947 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
178048 |
178072 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
178433 |
178935 |
- |
PL587 |
Unspecified |
| scaffold19054 |
179233 |
179332 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold19054 |
179725 |
179790 |
+ |
G-rich |
Low_complexity |
| scaffold19054 |
179885 |
179935 |
+ |
RS6320 |
Unspecified |
| scaffold19054 |
180336 |
180374 |
+ |
(AAGT)n |
Simple_repeat |
| scaffold19054 |
180898 |
180916 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
181591 |
181629 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
181845 |
182038 |
- |
RS1728 |
Unspecified |
| scaffold19054 |
182057 |
182095 |
+ |
(TAA)n |
Simple_repeat |
| scaffold19054 |
182178 |
182311 |
- |
RS170 |
Unspecified |
| scaffold19054 |
182724 |
182765 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
183452 |
183719 |
- |
RS106 |
Unspecified |
| scaffold19054 |
183771 |
183800 |
+ |
(TGACC)n |
Simple_repeat |
| scaffold19054 |
184040 |
184151 |
+ |
(CATAAT)n |
Simple_repeat |
| scaffold19054 |
184461 |
184507 |
+ |
(TTTTG)n |
Simple_repeat |
| scaffold19054 |
185554 |
185575 |
+ |
(TTGG)n |
Simple_repeat |
| scaffold19054 |
185646 |
185684 |
+ |
(TATGATG)n |
Simple_repeat |
| scaffold19054 |
186482 |
186560 |
+ |
(TCATGG)n |
Simple_repeat |
| scaffold19054 |
187355 |
187372 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
189496 |
189541 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
189550 |
189562 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold19054 |
189563 |
189631 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
189632 |
189639 |
+ |
(ATTTTTT)n |
Simple_repeat |
| scaffold19054 |
189729 |
189839 |
+ |
(CAC)n |
Simple_repeat |
| scaffold19054 |
191210 |
191299 |
- |
LTR-7_Mad-LTR |
LTR |
| scaffold19054 |
192019 |
192043 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
192347 |
192381 |
+ |
(TATTAT)n |
Simple_repeat |
| scaffold19054 |
195213 |
195397 |
- |
RS38 |
Unspecified |
| scaffold19054 |
195686 |
195788 |
+ |
RS16382 |
Unspecified |
| scaffold19054 |
195857 |
196325 |
- |
PL571 |
Unspecified |
| scaffold19054 |
197193 |
197662 |
+ |
PL402 |
Unspecified |
| scaffold19054 |
198218 |
198251 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
198983 |
199012 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
199307 |
199365 |
+ |
(AATA)n |
Simple_repeat |
| scaffold19054 |
199627 |
199669 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold19054 |
201146 |
201175 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
201703 |
201732 |
+ |
(CGTCTT)n |
Simple_repeat |
| scaffold19054 |
205967 |
206022 |
+ |
RS9592 |
Unspecified |
| scaffold19054 |
207742 |
207777 |
+ |
(GTCA)n |
Simple_repeat |
| scaffold19054 |
209960 |
210027 |
- |
RS1258 |
Unspecified |
| scaffold19054 |
209983 |
210036 |
- |
RS16692 |
Unspecified |
| scaffold19054 |
211496 |
211523 |
+ |
(ATAC)n |
Simple_repeat |
| scaffold19054 |
213445 |
213462 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
215818 |
216038 |
+ |
RS18 |
Unspecified |
| scaffold19054 |
222484 |
222727 |
+ |
RS4 |
Unspecified |
| scaffold19054 |
222631 |
222757 |
+ |
RS15433 |
Unspecified |
| scaffold19054 |
223443 |
223573 |
- |
RS620 |
Unspecified |
| scaffold19054 |
223890 |
223895 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold19054 |
223896 |
223934 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold19054 |
224583 |
224818 |
- |
RS14573 |
Unspecified |
| scaffold19054 |
224698 |
224855 |
- |
RS620 |
Unspecified |
| scaffold19054 |
225082 |
225105 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
225168 |
225190 |
+ |
(TCT)n |
Simple_repeat |
| scaffold19054 |
225193 |
225224 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
225627 |
225632 |
+ |
(TATTTAT)n |
Simple_repeat |
| scaffold19054 |
225633 |
225671 |
+ |
(TTAT)n |
Simple_repeat |
| scaffold19054 |
226776 |
227051 |
- |
RS342 |
Unspecified |
| scaffold19054 |
227408 |
227528 |
+ |
PL8 |
Unspecified |
| scaffold19054 |
227421 |
227567 |
- |
PL358 |
Unspecified |
| scaffold19054 |
228238 |
228473 |
- |
RS14573 |
Unspecified |
| scaffold19054 |
228353 |
228510 |
- |
RS620 |
Unspecified |
| scaffold19054 |
228737 |
228760 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
228823 |
228845 |
+ |
(TCT)n |
Simple_repeat |
| scaffold19054 |
228848 |
228879 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
228965 |
228985 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
229119 |
229224 |
+ |
(TTTAT)n |
Simple_repeat |
| scaffold19054 |
229383 |
229416 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
229421 |
229460 |
+ |
(TATATT)n |
Simple_repeat |
| scaffold19054 |
229461 |
229487 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
235266 |
235302 |
+ |
(CGA)n |
Simple_repeat |
| scaffold19054 |
235417 |
235439 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
235701 |
235921 |
- |
RS4 |
Unspecified |
| scaffold19054 |
236310 |
236401 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
236524 |
236558 |
+ |
(CGCCAC)n |
Simple_repeat |
| scaffold19054 |
236835 |
236884 |
- |
PL375 |
Unspecified |
| scaffold19054 |
237817 |
237944 |
+ |
RS248 |
Unspecified |
| scaffold19054 |
238162 |
238283 |
+ |
RS163 |
Unspecified |
| scaffold19054 |
238828 |
238925 |
- |
RS628 |
Unspecified |
| scaffold19054 |
238980 |
239029 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
239073 |
239304 |
+ |
RS138 |
Unspecified |
| scaffold19054 |
241107 |
241474 |
- |
RS15271 |
Unspecified |
| scaffold19054 |
241538 |
241789 |
- |
RS17394 |
Unspecified |
| scaffold19054 |
242632 |
242641 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold19054 |
242642 |
242720 |
+ |
(TTCAC)n |
Simple_repeat |
| scaffold19054 |
242721 |
242827 |
+ |
(CAGTT)n |
Simple_repeat |
| scaffold19054 |
243019 |
243150 |
- |
RS17847 |
Unspecified |
| scaffold19054 |
244616 |
244870 |
- |
RS13760 |
Unspecified |
| scaffold19054 |
244928 |
245029 |
- |
RS13686 |
Unspecified |
| scaffold19054 |
245069 |
245161 |
+ |
RS13686 |
Unspecified |
| scaffold19054 |
246174 |
246532 |
- |
RS221 |
Unspecified |
| scaffold19054 |
248075 |
248110 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
249461 |
249536 |
+ |
(CAGCT)n |
Simple_repeat |
| scaffold19054 |
252796 |
253008 |
- |
RS1073 |
Unspecified |
| scaffold19054 |
253862 |
253911 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
253949 |
253994 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
254066 |
254102 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
254898 |
254927 |
+ |
(TAA)n |
Simple_repeat |
| scaffold19054 |
254933 |
255170 |
- |
RS4 |
Unspecified |
| scaffold19054 |
255247 |
255312 |
+ |
(CTGAA)n |
Simple_repeat |
| scaffold19054 |
255352 |
255397 |
+ |
(TGAGAG)n |
Simple_repeat |
| scaffold19054 |
255615 |
255881 |
+ |
RS82 |
Unspecified |
| scaffold19054 |
256210 |
256244 |
+ |
(ATA)n |
Simple_repeat |
| scaffold19054 |
256623 |
256664 |
+ |
(AAT)n |
Simple_repeat |
| scaffold19054 |
258451 |
258914 |
+ |
PL476 |
Unspecified |
| scaffold19054 |
259163 |
259181 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
260265 |
260406 |
+ |
RS726 |
Unspecified |
| scaffold19054 |
260403 |
260615 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold19054 |
260616 |
260816 |
+ |
Copia-3_PTri-I |
LTR/Copia |
| scaffold19054 |
262191 |
262228 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
262744 |
262760 |
+ |
(GGT)n |
Simple_repeat |
| scaffold19054 |
264646 |
264704 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
266390 |
266434 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
266439 |
266468 |
+ |
(GAATA)n |
Simple_repeat |
| scaffold19054 |
267215 |
267284 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
267583 |
267780 |
+ |
Gypsy-40_STu-I |
LTR/Gypsy |
| scaffold19054 |
268533 |
268895 |
+ |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold19054 |
268602 |
268671 |
+ |
MuDR-5_Mad |
DNA/MULE-MuDR |
| scaffold19054 |
269419 |
269467 |
+ |
MuDR-13_GM |
DNA/MULE-MuDR |
| scaffold19054 |
269526 |
269784 |
+ |
RS819 |
Unspecified |
| scaffold19054 |
269835 |
269978 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
270252 |
270472 |
- |
PL6 |
Unspecified |
| scaffold19054 |
271273 |
271351 |
+ |
(GAAATAC)n |
Simple_repeat |
| scaffold19054 |
271413 |
271592 |
+ |
RS184 |
Unspecified |
| scaffold19054 |
271596 |
272270 |
- |
RS1259 |
Unspecified |
| scaffold19054 |
272247 |
272467 |
- |
RS594 |
Unspecified |
| scaffold19054 |
272450 |
272657 |
+ |
RS242 |
Unspecified |
| scaffold19054 |
272803 |
272846 |
+ |
A-rich |
Low_complexity |
| scaffold19054 |
273209 |
273332 |
- |
RS1804 |
Unspecified |
| scaffold19054 |
273209 |
273375 |
+ |
PL253 |
Unspecified |
| scaffold19054 |
273552 |
273588 |
+ |
(AACAA)n |
Simple_repeat |
| scaffold19054 |
274181 |
274238 |
+ |
(ATGAAC)n |
Simple_repeat |
| scaffold19054 |
274280 |
274327 |
+ |
(AAAAACG)n |
Simple_repeat |
| scaffold19054 |
274340 |
274387 |
+ |
(ATGGTG)n |
Simple_repeat |
| scaffold19054 |
274631 |
274672 |
+ |
GA-rich |
Low_complexity |
| scaffold19054 |
274884 |
274925 |
+ |
(TAAAA)n |
Simple_repeat |
| scaffold19054 |
275013 |
275052 |
+ |
(CT)n |
Simple_repeat |
| scaffold19054 |
275061 |
275095 |
+ |
(A)n |
Simple_repeat |
| scaffold19054 |
275319 |
275363 |
+ |
(CATTTT)n |
Simple_repeat |
| scaffold19054 |
276439 |
276620 |
- |
PL253 |
Unspecified |
| scaffold19054 |
276482 |
276748 |
- |
PL253 |
Unspecified |
| scaffold19054 |
276595 |
276808 |
- |
PL253 |
Unspecified |
| scaffold19054 |
280132 |
280691 |
- |
RS819 |
Unspecified |
| scaffold19054 |
281498 |
281546 |
- |
MuDR-13_GM |
DNA/MULE-MuDR |
| scaffold19054 |
281578 |
282396 |
- |
MuDR_A_B |
MuDR_A_B(TransposonPSI) |
| scaffold19054 |
282294 |
282357 |
- |
MuDR-5_Mad |
DNA/MULE-MuDR |
| scaffold19054 |
283186 |
283551 |
- |
Gypsy-40_STu-I |
LTR/Gypsy |
| scaffold19054 |
283937 |
283987 |
+ |
GA-rich |
Low_complexity |
| scaffold19054 |
284251 |
284283 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
284359 |
284397 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
284857 |
284928 |
- |
Helitron1_ZM |
RC/Helitron |
| scaffold19054 |
286914 |
286972 |
+ |
(GTTGTT)n |
Simple_repeat |
| scaffold19054 |
287397 |
288048 |
+ |
RS604 |
Unspecified |
| scaffold19054 |
289019 |
289241 |
- |
L1-14_Mad |
LINE/L1 |
| scaffold19054 |
289651 |
290466 |
+ |
RS39 |
Unspecified |
| scaffold19054 |
290942 |
291009 |
+ |
Gypsy-72-LTR_ZM |
LTR/Gypsy |
| scaffold19054 |
291171 |
291453 |
- |
LTR2-ZM_LTR |
LTR |
| scaffold19054 |
291658 |
291948 |
- |
LTR-1_SBi-LTR |
LTR |
| scaffold19054 |
292379 |
292419 |
+ |
(AATTA)n |
Simple_repeat |
| scaffold19054 |
292793 |
292818 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
292819 |
292862 |
+ |
(TATTTT)n |
Simple_repeat |
| scaffold19054 |
293090 |
293119 |
+ |
(T)n |
Simple_repeat |
| scaffold19054 |
293577 |
293617 |
+ |
(GAAGAT)n |
Simple_repeat |
| scaffold19054 |
293690 |
294283 |
+ |
RS514 |
Unspecified |
| scaffold19054 |
293720 |
294241 |
+ |
RS3091 |
Unspecified |
| scaffold19054 |
293826 |
294356 |
+ |
PL445 |
Unspecified |
| scaffold19054 |
293899 |
294369 |
- |
PL532 |
Unspecified |
| scaffold19054 |
295494 |
296498 |
+ |
RS51 |
Unspecified |
| scaffold19054 |
296515 |
298817 |
+ |
Gypsy-23_VV-I |
LTR/Gypsy |
| scaffold19054 |
298874 |
298942 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold19054 |
298934 |
298989 |
+ |
Gypsy-10_Pru-LTR |
LTR/Gypsy |
| scaffold19054 |
300387 |
300978 |
+ |
RS23 |
Unspecified |
| scaffold19054 |
302797 |
302837 |
+ |
G-rich |
Low_complexity |